RNA–Protein interactions for RNA: ENST00000528165.5

CAPN1-214, Transcript of calpain 1, humanhuman

TSL 2

Gene CAPN1, Length 2,828 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-214ENST00000528165 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.58■□□□□ 0.08
CAPN1-214ENST00000528165 GRID1Q9ULK0 1009 aa15.58■□□□□ 0.08
CAPN1-214ENST00000528165 POC1B-GALNT4F8VUJ3 575 aa15.57■□□□□ 0.08
CAPN1-214ENST00000528165 P4HA2O15460 535 aa15.57■□□□□ 0.08
CAPN1-214ENST00000528165 MAPK4P31152 587 aa15.57■□□□□ 0.08
CAPN1-214ENST00000528165 RPA3P35244 121 aaPredicted RBP15.57■□□□□ 0.08
CAPN1-214ENST00000528165 SLC18A1P54219 525 aa15.57■□□□□ 0.08
CAPN1-214ENST00000528165 FMO1Q01740 532 aa15.57■□□□□ 0.08
CAPN1-214ENST00000528165 EPC2Q52LR7 807 aa15.57■□□□□ 0.08
CAPN1-214ENST00000528165 CLNKQ7Z7G1 428 aa15.57■□□□□ 0.08
CAPN1-214ENST00000528165 FAM71AQ8IYT1 594 aa15.57■□□□□ 0.08
CAPN1-214ENST00000528165 LINC00116Q8NCU8 138 aa15.57■□□□□ 0.08
CAPN1-214ENST00000528165 CYP2W1Q8TAV3 490 aa15.57■□□□□ 0.08
CAPN1-214ENST00000528165 SCG3Q8WXD2 468 aaKnown RBP15.57■□□□□ 0.08
CAPN1-214ENST00000528165 KIAA1586Q9HCI6 787 aa15.57■□□□□ 0.08
CAPN1-214ENST00000528165 NPHS2Q9NP85 383 aa15.57■□□□□ 0.08
CAPN1-214ENST00000528165 ANAPC7Q9UJX3 599 aa15.57■□□□□ 0.08
CAPN1-214ENST00000528165 R3HDM2Q9Y2K5 976 aaKnown RBP15.57■□□□□ 0.08
CAPN1-214ENST00000528165 SBDSQ9Y3A5 250 aaKnown RBP eCLIP15.57■□□□□ 0.08
CAPN1-214ENST00000528165 GAKO14976 1311 aa15.57■□□□□ 0.08
CAPN1-214ENST00000528165 SPATA31A5Q5VU36 1347 aa15.57■□□□□ 0.08
CAPN1-214ENST00000528165 SPATA31A6Q5VVP1 1343 aa15.57■□□□□ 0.08
CAPN1-214ENST00000528165 SPATA31A7Q8IWB4 1347 aa15.57■□□□□ 0.08
CAPN1-214ENST00000528165 SBF2Q86WG5 1849 aa15.57■□□□□ 0.08
CAPN1-214ENST00000528165 C2CD2LO14523 706 aa15.57■□□□□ 0.08
CAPN1-214ENST00000528165 ZBTB39O15060 712 aa15.57■□□□□ 0.08
CAPN1-214ENST00000528165 CHMP2AO43633 222 aa15.57■□□□□ 0.08
CAPN1-214ENST00000528165 CCDC22O60826 627 aa15.57■□□□□ 0.08
CAPN1-214ENST00000528165 ATP9AO75110 1047 aa15.57■□□□□ 0.08
CAPN1-214ENST00000528165 FOSP01100 380 aaPredicted RBP15.57■□□□□ 0.08
CAPN1-214ENST00000528165 OCRLQ01968 901 aa15.57■□□□□ 0.08
CAPN1-214ENST00000528165 CENPCQ03188 943 aa15.57■□□□□ 0.08
CAPN1-214ENST00000528165 SLC5A9Q2M3M2 681 aa15.57■□□□□ 0.08
CAPN1-214ENST00000528165 OTOAQ7RTW8 1153 aa15.57■□□□□ 0.08
CAPN1-214ENST00000528165 PPM1KQ8N3J5 372 aa15.57■□□□□ 0.08
CAPN1-214ENST00000528165 SLC5A5Q92911 643 aa15.57■□□□□ 0.08
CAPN1-214ENST00000528165 DYDC2Q96IM9 177 aa15.57■□□□□ 0.08
CAPN1-214ENST00000528165 MIPEPQ99797 713 aa15.57■□□□□ 0.08
CAPN1-214ENST00000528165 HSD17B14Q9BPX1 270 aa15.57■□□□□ 0.08
CAPN1-214ENST00000528165 PCIF1Q9H4Z3 704 aa15.57■□□□□ 0.08
CAPN1-214ENST00000528165 TUFT1Q9NNX1 390 aa15.57■□□□□ 0.08
CAPN1-214ENST00000528165 SENP1Q9P0U3 644 aa15.57■□□□□ 0.08
CAPN1-214ENST00000528165 SIGLEC16A6NMB1 481 aa15.56■□□□□ 0.08
CAPN1-214ENST00000528165 FAM196BA6NMK8 535 aa15.56■□□□□ 0.08
CAPN1-214ENST00000528165 KCNA3P22001 575 aa15.56■□□□□ 0.08
CAPN1-214ENST00000528165 PKN2Q16513 984 aaKnown RBP15.56■□□□□ 0.08
CAPN1-214ENST00000528165 PPFIBP2Q8ND30 876 aa15.56■□□□□ 0.08
CAPN1-214ENST00000528165 HERPUD2Q9BSE4 406 aa15.56■□□□□ 0.08
CAPN1-214ENST00000528165 CADM1Q9BY67 442 aaKnown RBP15.56■□□□□ 0.08
CAPN1-214ENST00000528165 SAYSD1Q9NPB0 183 aa15.56■□□□□ 0.08
CAPN1-214ENST00000528165 SRP68Q9UHB9 627 aaKnown RBP15.56■□□□□ 0.08
CAPN1-214ENST00000528165 SLITRK3O94933 977 aa15.56■□□□□ 0.08
CAPN1-214ENST00000528165 ZWINTO95229 277 aa15.56■□□□□ 0.08
CAPN1-214ENST00000528165 GRAPQ13588 217 aa15.56■□□□□ 0.08
CAPN1-214ENST00000528165 DSTYKQ6XUX3 929 aa15.56■□□□□ 0.08
CAPN1-214ENST00000528165 GRAPLQ8TC17 118 aaPredicted RBP15.56■□□□□ 0.08
CAPN1-214ENST00000528165 IFT43Q96FT9 208 aa15.56■□□□□ 0.08
CAPN1-214ENST00000528165 HEMGNQ9BXL5 484 aa15.56■□□□□ 0.08
CAPN1-214ENST00000528165 DYNC1LI1Q9Y6G9 523 aaKnown RBP15.56■□□□□ 0.08
CAPN1-214ENST00000528165 TROVE2P10155 538 aaKnown RBP eCLIP15.55■□□□□ 0.08
CAPN1-214ENST00000528165 GCAP28676 217 aa15.55■□□□□ 0.08
CAPN1-214ENST00000528165 CIITAP33076 1130 aa15.55■□□□□ 0.08
CAPN1-214ENST00000528165 LAMB3Q13751 1172 aa15.55■□□□□ 0.08
CAPN1-214ENST00000528165 MYBPC2Q14324 1141 aa15.55■□□□□ 0.08
CAPN1-214ENST00000528165 SLC1A5Q15758 541 aa15.55■□□□□ 0.08
CAPN1-214ENST00000528165 USH1GQ495M9 461 aa15.55■□□□□ 0.08
CAPN1-214ENST00000528165 LRRC74BQ6ZQY2 392 aa15.55■□□□□ 0.08
CAPN1-214ENST00000528165 GSTA5Q7RTV2 222 aa15.55■□□□□ 0.08
CAPN1-214ENST00000528165 ZCCHC9Q8N567 271 aaKnown RBP15.55■□□□□ 0.08
CAPN1-214ENST00000528165 AMNQ9BXJ7 453 aa15.55■□□□□ 0.08
CAPN1-214ENST00000528165 FOXP3Q9BZS1 431 aa15.55■□□□□ 0.08
CAPN1-214ENST00000528165 DAGLAQ9Y4D2 1042 aa15.55■□□□□ 0.08
CAPN1-214ENST00000528165 CAPN9O14815 690 aa15.55■□□□□ 0.08
CAPN1-214ENST00000528165 KRT36O76013 467 aa15.55■□□□□ 0.08
CAPN1-214ENST00000528165 CACNA2D1P54289 1103 aa15.55■□□□□ 0.08
CAPN1-214ENST00000528165 KCNQ4P56696 695 aa15.55■□□□□ 0.08
CAPN1-214ENST00000528165 SLC34A1Q06495 639 aa15.55■□□□□ 0.08
CAPN1-214ENST00000528165 SYDE2Q5VT97 1194 aa15.55■□□□□ 0.08
CAPN1-214ENST00000528165 TDRPQ86YL5 185 aa15.55■□□□□ 0.08
CAPN1-214ENST00000528165 ZNF398Q8TD17 642 aa15.55■□□□□ 0.08
CAPN1-214ENST00000528165 ZNF75CPQ92670 426 aaPredicted RBP15.55■□□□□ 0.08
CAPN1-214ENST00000528165 STMN2Q93045 179 aa15.55■□□□□ 0.08
CAPN1-214ENST00000528165 FAM118BQ9BPY3 351 aa15.55■□□□□ 0.08
CAPN1-214ENST00000528165 BTBD10Q9BSF8 475 aa15.55■□□□□ 0.08
CAPN1-214ENST00000528165 CYLDQ9NQC7 956 aa15.55■□□□□ 0.08
CAPN1-214ENST00000528165 NEU2Q9Y3R4 380 aa15.55■□□□□ 0.08
CAPN1-214ENST00000528165 MAGEA13PA6NCF6 341 aa15.54■□□□□ 0.08
CAPN1-214ENST00000528165 RGL2O15211 777 aa15.54■□□□□ 0.08
CAPN1-214ENST00000528165 UFL1O94874 794 aa15.54■□□□□ 0.08
CAPN1-214ENST00000528165 CYP11B1P15538 503 aa15.54■□□□□ 0.08
CAPN1-214ENST00000528165 SHMT1P34896 483 aa15.54■□□□□ 0.08
CAPN1-214ENST00000528165 MXI1P50539 228 aa15.54■□□□□ 0.08
CAPN1-214ENST00000528165 MFAP3P55082 362 aa15.54■□□□□ 0.08
CAPN1-214ENST00000528165 CUL3Q13618 768 aa15.54■□□□□ 0.08
CAPN1-214ENST00000528165 P3H1Q32P28 736 aa15.54■□□□□ 0.08
CAPN1-214ENST00000528165 C15orf52Q6ZUT6 534 aaKnown RBP15.54■□□□□ 0.08
CAPN1-214ENST00000528165 PHC3Q8NDX5 983 aa15.54■□□□□ 0.08
CAPN1-214ENST00000528165 NRG4Q8WWG1 115 aa15.54■□□□□ 0.08
CAPN1-214ENST00000528165 MCUR1Q96AQ8 359 aa15.54■□□□□ 0.08
CAPN1-214ENST00000528165 TTC25Q96NG3 672 aa15.54■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms