RNA–Protein interactions for RNA: ENST00000527897.1

CAPN1-213, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 879 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-213ENST00000527897 ZNF720Q7Z2F6 126 aa16.92■□□□□ 0.3
CAPN1-213ENST00000527897 GPR65Q8IYL9 337 aa16.92■□□□□ 0.3
CAPN1-213ENST00000527897 DNAJC19Q96DA6 116 aa16.92■□□□□ 0.3
CAPN1-213ENST00000527897 PLEKHA4Q9H4M7 779 aa16.92■□□□□ 0.3
CAPN1-213ENST00000527897 PANK4Q9NVE7 773 aa16.92■□□□□ 0.3
CAPN1-213ENST00000527897 SEL1LQ9UBV2 794 aa16.92■□□□□ 0.3
CAPN1-213ENST00000527897 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.91■□□□□ 0.3
CAPN1-213ENST00000527897 A0A0B4J269 797 aa16.91■□□□□ 0.3
CAPN1-213ENST00000527897 FGFR3P22607 806 aa16.91■□□□□ 0.3
CAPN1-213ENST00000527897 RPL9P32969 192 aaKnown RBP16.91■□□□□ 0.3
CAPN1-213ENST00000527897 ACOT2P49753 483 aa16.91■□□□□ 0.3
CAPN1-213ENST00000527897 GUCY2FP51841 1108 aa16.91■□□□□ 0.3
CAPN1-213ENST00000527897 ENOX2Q16206 610 aaKnown RBP16.91■□□□□ 0.3
CAPN1-213ENST00000527897 KYAT1Q16773 422 aa16.91■□□□□ 0.3
CAPN1-213ENST00000527897 LIN9Q5TKA1 542 aa16.91■□□□□ 0.3
CAPN1-213ENST00000527897 LILRA6Q6PI73 481 aa16.91■□□□□ 0.3
CAPN1-213ENST00000527897 C15orf39Q6ZRI6 1047 aa16.91■□□□□ 0.3
CAPN1-213ENST00000527897 KCNG4Q8TDN1 519 aa16.91■□□□□ 0.3
CAPN1-213ENST00000527897 POMGNT1Q8WZA1 660 aa16.91■□□□□ 0.3
CAPN1-213ENST00000527897 EDAQ92838 391 aa16.91■□□□□ 0.3
CAPN1-213ENST00000527897 PLEKHA5Q9HAU0 1116 aa16.91■□□□□ 0.3
CAPN1-213ENST00000527897 CDY1Q9Y6F8 540 aa16.91■□□□□ 0.3
CAPN1-213ENST00000527897 MYO10Q9HD67 2058 aa16.91■□□□□ 0.3
CAPN1-213ENST00000527897 DENND4AQ7Z401 1863 aa16.9■□□□□ 0.3
CAPN1-213ENST00000527897 TTC26A0AVF1 554 aa16.9■□□□□ 0.3
CAPN1-213ENST00000527897 PRR33A8MZF0 331 aa16.9■□□□□ 0.3
CAPN1-213ENST00000527897 ARPP19P56211 112 aa16.9■□□□□ 0.3
CAPN1-213ENST00000527897 ZXDAP98168 799 aa16.9■□□□□ 0.3
CAPN1-213ENST00000527897 DNM1Q05193 864 aaKnown RBP16.9■□□□□ 0.3
CAPN1-213ENST00000527897 SHC4Q6S5L8 630 aa16.9■□□□□ 0.3
CAPN1-213ENST00000527897 ANKS3Q6ZW76 656 aa16.9■□□□□ 0.3
CAPN1-213ENST00000527897 CCDC65Q8IXS2 484 aa16.9■□□□□ 0.3
CAPN1-213ENST00000527897 SYCP3Q8IZU3 236 aa16.9■□□□□ 0.3
CAPN1-213ENST00000527897 CMASQ8NFW8 434 aaPredicted RBP16.9■□□□□ 0.3
CAPN1-213ENST00000527897 NOC3LQ8WTT2 800 aaKnown RBP16.9■□□□□ 0.3
CAPN1-213ENST00000527897 HDAC7Q8WUI4 952 aa16.9■□□□□ 0.3
CAPN1-213ENST00000527897 KCNN1Q92952 543 aa16.9■□□□□ 0.3
CAPN1-213ENST00000527897 ACSF2Q96CM8 615 aaPredicted RBP16.9■□□□□ 0.3
CAPN1-213ENST00000527897 ST6GALNAC4Q9H4F1 302 aa16.9■□□□□ 0.3
CAPN1-213ENST00000527897 MTRRQ9UBK8 725 aa16.9■□□□□ 0.3
CAPN1-213ENST00000527897 LIMD1Q9UGP4 676 aa16.9■□□□□ 0.3
CAPN1-213ENST00000527897 AGO2Q9UKV8 859 aaKnown RBP16.9■□□□□ 0.3
CAPN1-213ENST00000527897 CFAP45Q9UL16 551 aa16.9■□□□□ 0.3
CAPN1-213ENST00000527897 POLIQ9UNA4 740 aa16.9■□□□□ 0.3
CAPN1-213ENST00000527897 XPOTO43592 962 aaKnown RBP16.89■□□□□ 0.29
CAPN1-213ENST00000527897 FAM189A1O60320 539 aa16.89■□□□□ 0.29
CAPN1-213ENST00000527897 ASGR2P07307 311 aa16.89■□□□□ 0.29
CAPN1-213ENST00000527897 GBP2P32456 591 aaPredicted RBP16.89■□□□□ 0.29
CAPN1-213ENST00000527897 CASP5P51878 434 aa16.89■□□□□ 0.29
CAPN1-213ENST00000527897 KCNA1Q09470 495 aa16.89■□□□□ 0.29
CAPN1-213ENST00000527897 PTPN21Q16825 1174 aa16.89■□□□□ 0.29
CAPN1-213ENST00000527897 PPM1LQ5SGD2 360 aa16.89■□□□□ 0.29
CAPN1-213ENST00000527897 VARS2Q5ST30 1063 aaKnown RBP16.89■□□□□ 0.29
CAPN1-213ENST00000527897 JADE1Q6IE81 842 aa16.89■□□□□ 0.29
CAPN1-213ENST00000527897 SLFN12LQ6IEE8 588 aa16.89■□□□□ 0.29
CAPN1-213ENST00000527897 RSPO2Q6UXX9 243 aaPredicted RBP16.89■□□□□ 0.29
CAPN1-213ENST00000527897 OTOP3Q7RTS5 596 aa16.89■□□□□ 0.29
CAPN1-213ENST00000527897 PLCD3Q8N3E9 789 aa16.89■□□□□ 0.29
CAPN1-213ENST00000527897 HVCN1Q96D96 273 aa16.89■□□□□ 0.29
CAPN1-213ENST00000527897 ACCSQ96QU6 501 aa16.89■□□□□ 0.29
CAPN1-213ENST00000527897 ZDHHC7Q9NXF8 308 aa16.89■□□□□ 0.29
CAPN1-213ENST00000527897 FBXW11Q9UKB1 542 aa16.89■□□□□ 0.29
CAPN1-213ENST00000527897 CPSF3Q9UKF6 684 aaKnown RBP16.89■□□□□ 0.29
CAPN1-213ENST00000527897 UBQLN1Q9UMX0 589 aaKnown RBP16.89■□□□□ 0.29
CAPN1-213ENST00000527897 EXOC7Q9UPT5 735 aa16.89■□□□□ 0.29
CAPN1-213ENST00000527897 PCDHB13Q9Y5F0 798 aa16.89■□□□□ 0.29
CAPN1-213ENST00000527897 CCL16O15467 120 aa16.88■□□□□ 0.29
CAPN1-213ENST00000527897 POLR2DO15514 142 aaKnown RBP16.88■□□□□ 0.29
CAPN1-213ENST00000527897 ZMYND10O75800 440 aa16.88■□□□□ 0.29
CAPN1-213ENST00000527897 C8AP07357 584 aa16.88■□□□□ 0.29
CAPN1-213ENST00000527897 ASIC1P78348 528 aa16.88■□□□□ 0.29
CAPN1-213ENST00000527897 AXDND1Q5T1B0 1012 aaPredicted RBP16.88■□□□□ 0.29
CAPN1-213ENST00000527897 L1TD1Q5T7N2 865 aaKnown RBP16.88■□□□□ 0.29
CAPN1-213ENST00000527897 TRIM67Q6ZTA4 783 aa16.88■□□□□ 0.29
CAPN1-213ENST00000527897 IQUBQ8NA54 791 aa16.88■□□□□ 0.29
CAPN1-213ENST00000527897 BEST2Q8NFU1 509 aa16.88■□□□□ 0.29
CAPN1-213ENST00000527897 SLC7A14Q8TBB6 771 aa16.88■□□□□ 0.29
CAPN1-213ENST00000527897 HPS3Q969F9 1004 aa16.88■□□□□ 0.29
CAPN1-213ENST00000527897 ZNF707Q96C28 371 aaPredicted RBP16.88■□□□□ 0.29
CAPN1-213ENST00000527897 FGFBP2Q9BYJ0 223 aa16.88■□□□□ 0.29
CAPN1-213ENST00000527897 PRKD2Q9BZL6 878 aa16.88■□□□□ 0.29
CAPN1-213ENST00000527897 LRRC27Q9C0I9 530 aa16.88■□□□□ 0.29
CAPN1-213ENST00000527897 TNMDQ9H2S6 317 aa16.88■□□□□ 0.29
CAPN1-213ENST00000527897 FAM13BQ9NYF5 915 aa16.88■□□□□ 0.29
CAPN1-213ENST00000527897 PCDHA7Q9UN72 937 aa16.88■□□□□ 0.29
CAPN1-213ENST00000527897 USTQ9Y2C2 406 aa16.88■□□□□ 0.29
CAPN1-213ENST00000527897 HCN4Q9Y3Q4 1203 aa16.88■□□□□ 0.29
CAPN1-213ENST00000527897 CLUHO75153 1309 aa16.88■□□□□ 0.29
CAPN1-213ENST00000527897 TMEM221A6NGB7 291 aa16.87■□□□□ 0.29
CAPN1-213ENST00000527897 M0R296 226 aa16.87■□□□□ 0.29
CAPN1-213ENST00000527897 SYN3O14994 580 aa16.87■□□□□ 0.29
CAPN1-213ENST00000527897 PPP1R37O75864 691 aa16.87■□□□□ 0.29
CAPN1-213ENST00000527897 PRPF6O94906 941 aaKnown RBP16.87■□□□□ 0.29
CAPN1-213ENST00000527897 NFICP08651 508 aa16.87■□□□□ 0.29
CAPN1-213ENST00000527897 AMPD3Q01432 767 aa16.87■□□□□ 0.29
CAPN1-213ENST00000527897 RAB33AQ14088 237 aa16.87■□□□□ 0.29
CAPN1-213ENST00000527897 TMEM132DQ14C87 1099 aa16.87■□□□□ 0.29
CAPN1-213ENST00000527897 E2F4Q16254 413 aa16.87■□□□□ 0.29
CAPN1-213ENST00000527897 CTXN3Q4LDR2 81 aa16.87■□□□□ 0.29
CAPN1-213ENST00000527897 ATL3Q6DD88 541 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms