RNA–Protein interactions for RNA: ENST00000527464.5

NR1H3-229, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 1 (best)

Gene NR1H3, Length 1,183 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-229ENST00000527464 RTP2Q5QGT7 225 aa18.36■□□□□ 0.53
NR1H3-229ENST00000527464 CD300LGQ6UXG3 332 aa18.36■□□□□ 0.53
NR1H3-229ENST00000527464 UNC13DQ70J99 1090 aa18.36■□□□□ 0.53
NR1H3-229ENST00000527464 SYCP3Q8IZU3 236 aa18.36■□□□□ 0.53
NR1H3-229ENST00000527464 POMGNT1Q8WZA1 660 aa18.36■□□□□ 0.53
NR1H3-229ENST00000527464 C18orf25Q96B23 403 aaPredicted RBP18.36■□□□□ 0.53
NR1H3-229ENST00000527464 KIF12Q96FN5 646 aa18.36■□□□□ 0.53
NR1H3-229ENST00000527464 B3GALT6Q96L58 329 aa18.36■□□□□ 0.53
NR1H3-229ENST00000527464 NECTIN4Q96NY8 510 aa18.36■□□□□ 0.53
NR1H3-229ENST00000527464 ASB7Q9H672 318 aa18.36■□□□□ 0.53
NR1H3-229ENST00000527464 HPSEQ9Y251 543 aa18.36■□□□□ 0.53
NR1H3-229ENST00000527464 DERAQ9Y315 318 aa18.36■□□□□ 0.53
NR1H3-229ENST00000527464 MTCL1Q9Y4B5 1905 aaKnown RBP18.36■□□□□ 0.53
NR1H3-229ENST00000527464 C5orf42Q9H799 3197 aa18.36■□□□□ 0.53
NR1H3-229ENST00000527464 A0A1W2PQ27 194 aa18.35■□□□□ 0.53
NR1H3-229ENST00000527464 A0A1W2PQ64 194 aa18.35■□□□□ 0.53
NR1H3-229ENST00000527464 A0A1W2PQD8 194 aa18.35■□□□□ 0.53
NR1H3-229ENST00000527464 EIF3DO15371 548 aaKnown RBP eCLIP18.35■□□□□ 0.53
NR1H3-229ENST00000527464 LDHAP00338 332 aaKnown RBP18.35■□□□□ 0.53
NR1H3-229ENST00000527464 MYL1P05976 194 aa18.35■□□□□ 0.53
NR1H3-229ENST00000527464 PFKFB1P16118 471 aa18.35■□□□□ 0.53
NR1H3-229ENST00000527464 ADSSP30520 456 aa18.35■□□□□ 0.53
NR1H3-229ENST00000527464 MTHFRP42898 656 aa18.35■□□□□ 0.53
NR1H3-229ENST00000527464 KCNA1Q09470 495 aa18.35■□□□□ 0.53
NR1H3-229ENST00000527464 CBX2Q14781 532 aaPredicted RBP18.35■□□□□ 0.53
NR1H3-229ENST00000527464 FAM26FQ5R3K3 315 aa18.35■□□□□ 0.53
NR1H3-229ENST00000527464 ZBTB41Q5SVQ8 909 aa18.35■□□□□ 0.53
NR1H3-229ENST00000527464 CEP57Q86XR8 500 aa18.35■□□□□ 0.53
NR1H3-229ENST00000527464 LNX1Q8TBB1 728 aaPredicted RBP18.35■□□□□ 0.53
NR1H3-229ENST00000527464 RIPOR3Q96MK2 946 aa18.35■□□□□ 0.53
NR1H3-229ENST00000527464 PHF7Q9BWX1 381 aaPredicted RBP18.35■□□□□ 0.53
NR1H3-229ENST00000527464 PLEKHA4Q9H4M7 779 aa18.35■□□□□ 0.53
NR1H3-229ENST00000527464 SFXN1Q9H9B4 322 aa18.35■□□□□ 0.53
NR1H3-229ENST00000527464 TISP43B9A030 160 aa18.34■□□□□ 0.53
NR1H3-229ENST00000527464 SYN3O14994 580 aa18.34■□□□□ 0.53
NR1H3-229ENST00000527464 KIAA0391O15091 583 aaKnown RBP18.34■□□□□ 0.53
NR1H3-229ENST00000527464 ACTN4O43707 911 aaKnown RBP18.34■□□□□ 0.53
NR1H3-229ENST00000527464 PAX3P23760 479 aa18.34■□□□□ 0.53
NR1H3-229ENST00000527464 SSTR3P32745 418 aaPredicted RBP18.34■□□□□ 0.53
NR1H3-229ENST00000527464 ACOT2P49753 483 aa18.34■□□□□ 0.53
NR1H3-229ENST00000527464 EHHADHQ08426 723 aa18.34■□□□□ 0.53
NR1H3-229ENST00000527464 PSMD5Q16401 504 aa18.34■□□□□ 0.53
NR1H3-229ENST00000527464 CYP26C1Q6V0L0 522 aa18.34■□□□□ 0.53
NR1H3-229ENST00000527464 ANKS3Q6ZW76 656 aa18.34■□□□□ 0.53
NR1H3-229ENST00000527464 C3orf58Q8NDZ4 430 aa18.34■□□□□ 0.53
NR1H3-229ENST00000527464 CMASQ8NFW8 434 aaPredicted RBP18.34■□□□□ 0.53
NR1H3-229ENST00000527464 FGFBP2Q9BYJ0 223 aa18.34■□□□□ 0.53
NR1H3-229ENST00000527464 RHOBTB2Q9BYZ6 727 aa18.34■□□□□ 0.53
NR1H3-229ENST00000527464 SERTAD1Q9UHV2 236 aa18.34■□□□□ 0.53
NR1H3-229ENST00000527464 NUB1Q9Y5A7 615 aa18.34■□□□□ 0.53
NR1H3-229ENST00000527464 UBE4BO95155 1302 aa18.33■□□□□ 0.53
NR1H3-229ENST00000527464 A0A1B0GVL5 298 aa18.33■□□□□ 0.52
NR1H3-229ENST00000527464 PRPF6O94906 941 aaKnown RBP18.33■□□□□ 0.52
NR1H3-229ENST00000527464 IL18RAPO95256 599 aa18.33■□□□□ 0.52
NR1H3-229ENST00000527464 SYKP43405 635 aa18.33■□□□□ 0.52
NR1H3-229ENST00000527464 ATAT1Q5SQI0 421 aa18.33■□□□□ 0.52
NR1H3-229ENST00000527464 RARS2Q5T160 578 aaKnown RBP18.33■□□□□ 0.52
NR1H3-229ENST00000527464 SPATA1Q5VX52 437 aa18.33■□□□□ 0.52
NR1H3-229ENST00000527464 LILRA6Q6PI73 481 aa18.33■□□□□ 0.52
NR1H3-229ENST00000527464 PRSS55Q6UWB4 352 aaPredicted RBP18.33■□□□□ 0.52
NR1H3-229ENST00000527464 C15orf39Q6ZRI6 1047 aa18.33■□□□□ 0.52
NR1H3-229ENST00000527464 EPM2AIP1Q7L775 607 aaPredicted RBP18.33■□□□□ 0.52
NR1H3-229ENST00000527464 NT5DC4Q86YG4 428 aa18.33■□□□□ 0.52
NR1H3-229ENST00000527464 BEST2Q8NFU1 509 aa18.33■□□□□ 0.52
NR1H3-229ENST00000527464 ZNF507Q8TCN5 953 aa18.33■□□□□ 0.52
NR1H3-229ENST00000527464 CHAMP1Q96JM3 812 aa18.33■□□□□ 0.52
NR1H3-229ENST00000527464 SUSD3Q96L08 255 aa18.33■□□□□ 0.52
NR1H3-229ENST00000527464 CD320Q9NPF0 282 aa18.33■□□□□ 0.52
NR1H3-229ENST00000527464 TUBGCP4Q9UGJ1 667 aa18.33■□□□□ 0.52
NR1H3-229ENST00000527464 C2CD2Q9Y426 696 aa18.33■□□□□ 0.52
NR1H3-229ENST00000527464 BACE2Q9Y5Z0 518 aa18.33■□□□□ 0.52
NR1H3-229ENST00000527464 ANK1P16157 1881 aa18.33■□□□□ 0.52
NR1H3-229ENST00000527464 PLXNA3P51805 1871 aa18.33■□□□□ 0.52
NR1H3-229ENST00000527464 SPDYE4A6NLX3 237 aa18.32■□□□□ 0.52
NR1H3-229ENST00000527464 TGM5O43548 720 aa18.32■□□□□ 0.52
NR1H3-229ENST00000527464 PAPLNO95428 1278 aa18.32■□□□□ 0.52
NR1H3-229ENST00000527464 AFMP43652 599 aa18.32■□□□□ 0.52
NR1H3-229ENST00000527464 BRCC3P46736 316 aa18.32■□□□□ 0.52
NR1H3-229ENST00000527464 SNRPFP62306 86 aaKnown RBP18.32■□□□□ 0.52
NR1H3-229ENST00000527464 TMEM132DQ14C87 1099 aa18.32■□□□□ 0.52
NR1H3-229ENST00000527464 CRELD2Q6UXH1 353 aaPredicted RBP18.32■□□□□ 0.52
NR1H3-229ENST00000527464 GPR149Q86SP6 731 aa18.32■□□□□ 0.52
NR1H3-229ENST00000527464 FAM212AQ96EL1 285 aa18.32■□□□□ 0.52
NR1H3-229ENST00000527464 PAGE5Q96GU1 130 aa18.32■□□□□ 0.52
NR1H3-229ENST00000527464 CLSTN3Q9BQT9 956 aa18.32■□□□□ 0.52
NR1H3-229ENST00000527464 APOL5Q9BWW9 433 aa18.32■□□□□ 0.52
NR1H3-229ENST00000527464 BLZF1Q9H2G9 400 aa18.32■□□□□ 0.52
NR1H3-229ENST00000527464 IKZF4Q9H2S9 585 aa18.32■□□□□ 0.52
NR1H3-229ENST00000527464 MAN1C1Q9NR34 630 aa18.32■□□□□ 0.52
NR1H3-229ENST00000527464 MTRRQ9UBK8 725 aa18.32■□□□□ 0.52
NR1H3-229ENST00000527464 LOC730098B7Z3J9 87 aa18.31■□□□□ 0.52
NR1H3-229ENST00000527464 EXTL3O43909 919 aa18.31■□□□□ 0.52
NR1H3-229ENST00000527464 RPL17P18621 184 aaKnown RBP18.31■□□□□ 0.52
NR1H3-229ENST00000527464 IGFBP6P24592 240 aaPredicted RBP18.31■□□□□ 0.52
NR1H3-229ENST00000527464 TKTP29401 623 aaKnown RBP18.31■□□□□ 0.52
NR1H3-229ENST00000527464 SPAG1Q07617 926 aa18.31■□□□□ 0.52
NR1H3-229ENST00000527464 CUL4BQ13620 913 aa18.31■□□□□ 0.52
NR1H3-229ENST00000527464 RAB33AQ14088 237 aa18.31■□□□□ 0.52
NR1H3-229ENST00000527464 JADE1Q6IE81 842 aa18.31■□□□□ 0.52
NR1H3-229ENST00000527464 PALB2Q86YC2 1186 aa18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms