RNA–Protein interactions for RNA: ENST00000525950.5

BDNF-213, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 3,829 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-213ENST00000525950 USH1GQ495M9 461 aa8.5□□□□□ -1.05
BDNF-213ENST00000525950 KRT39Q6A163 491 aa8.5□□□□□ -1.05
BDNF-213ENST00000525950 PLEKHO2Q8TD55 490 aa8.5□□□□□ -1.05
BDNF-213ENST00000525950 SLC7A6OSQ96CW6 309 aaPredicted RBP8.5□□□□□ -1.05
BDNF-213ENST00000525950 TMEM8AQ9HCN3 771 aa8.5□□□□□ -1.05
BDNF-213ENST00000525950 PHTF1Q9UMS5 762 aa8.5□□□□□ -1.05
BDNF-213ENST00000525950 TRIM33Q9UPN9 1127 aa8.5□□□□□ -1.05
BDNF-213ENST00000525950 ZBTB39O15060 712 aa8.5□□□□□ -1.05
BDNF-213ENST00000525950 AHCYL1O43865 530 aa8.5□□□□□ -1.05
BDNF-213ENST00000525950 NPTXRO95502 500 aa8.5□□□□□ -1.05
BDNF-213ENST00000525950 COL2A1P02458 1487 aaPredicted RBP8.5□□□□□ -1.05
BDNF-213ENST00000525950 POLR2MP0CAP2 368 aa8.5□□□□□ -1.05
BDNF-213ENST00000525950 PPP1R2P3Q6NXS1 205 aa8.5□□□□□ -1.05
BDNF-213ENST00000525950 PADI6Q6TGC4 694 aa8.5□□□□□ -1.05
BDNF-213ENST00000525950 NIPA1Q7RTP0 329 aa8.5□□□□□ -1.05
BDNF-213ENST00000525950 APBB1IPQ7Z5R6 666 aaPredicted RBP8.5□□□□□ -1.05
BDNF-213ENST00000525950 VSIG1Q86XK7 387 aa8.5□□□□□ -1.05
BDNF-213ENST00000525950 LMNTD2Q8IXW0 634 aa8.5□□□□□ -1.05
BDNF-213ENST00000525950 SRRM1Q8IYB3 904 aaKnown RBP8.5□□□□□ -1.05
BDNF-213ENST00000525950 KATNAL2Q8IYT4 538 aa8.5□□□□□ -1.05
BDNF-213ENST00000525950 KIRREL3Q8IZU9 778 aa8.5□□□□□ -1.05
BDNF-213ENST00000525950 OGFOD1Q8N543 542 aa8.5□□□□□ -1.05
BDNF-213ENST00000525950 ASAP3Q8TDY4 903 aa8.5□□□□□ -1.05
BDNF-213ENST00000525950 KAT5Q92993 513 aa8.5□□□□□ -1.05
BDNF-213ENST00000525950 BTBD6Q96KE9 485 aa8.5□□□□□ -1.05
BDNF-213ENST00000525950 LXNQ9BS40 222 aa8.5□□□□□ -1.05
BDNF-213ENST00000525950 SLC24A2Q9UI40 661 aa8.5□□□□□ -1.05
BDNF-213ENST00000525950 C2CD2LO14523 706 aa8.5□□□□□ -1.05
BDNF-213ENST00000525950 ATMINO43313 823 aaPredicted RBP8.5□□□□□ -1.05
BDNF-213ENST00000525950 PLA2G6O60733 806 aa8.5□□□□□ -1.05
BDNF-213ENST00000525950 T-ENOLP0DO92 83 aa8.5□□□□□ -1.05
BDNF-213ENST00000525950 PTPN4P29074 926 aa8.5□□□□□ -1.05
BDNF-213ENST00000525950 HOXA13P31271 388 aaPredicted RBP8.5□□□□□ -1.05
BDNF-213ENST00000525950 MAGEA4P43358 317 aa8.5□□□□□ -1.05
BDNF-213ENST00000525950 GCNT1Q02742 428 aa8.5□□□□□ -1.05
BDNF-213ENST00000525950 NFIAQ12857 509 aa8.5□□□□□ -1.05
BDNF-213ENST00000525950 SF3A3Q12874 501 aaKnown RBP eCLIP8.5□□□□□ -1.05
BDNF-213ENST00000525950 TMEM132AQ24JP5 1023 aa8.5□□□□□ -1.05
BDNF-213ENST00000525950 CPNE8Q86YQ8 564 aa8.5□□□□□ -1.05
BDNF-213ENST00000525950 MCOLN2Q8IZK6 566 aa8.5□□□□□ -1.05
BDNF-213ENST00000525950 RDH13Q8NBN7 331 aa8.5□□□□□ -1.05
BDNF-213ENST00000525950 FAM13CQ8NE31 585 aa8.5□□□□□ -1.05
BDNF-213ENST00000525950 C10orf82Q8WW14 230 aa8.5□□□□□ -1.05
BDNF-213ENST00000525950 SH3GL3Q99963 347 aa8.5□□□□□ -1.05
BDNF-213ENST00000525950 PRR12Q9ULL5 1215 aa8.5□□□□□ -1.05
BDNF-213ENST00000525950 PROSCO94903 275 aa8.49□□□□□ -1.05
BDNF-213ENST00000525950 P4HBP07237 508 aaKnown RBP8.49□□□□□ -1.05
BDNF-213ENST00000525950 LINGO3P0C6S8 592 aa8.49□□□□□ -1.05
BDNF-213ENST00000525950 GCAP28676 217 aa8.49□□□□□ -1.05
BDNF-213ENST00000525950 NCKAP1LP55160 1127 aa8.49□□□□□ -1.05
BDNF-213ENST00000525950 ZNF365Q70YC5 407 aa8.49□□□□□ -1.05
BDNF-213ENST00000525950 MICAL1Q8TDZ2 1067 aa8.49□□□□□ -1.05
BDNF-213ENST00000525950 VCPIP1Q96JH7 1222 aa8.49□□□□□ -1.05
BDNF-213ENST00000525950 NT5C1BQ96P26 610 aa8.49□□□□□ -1.05
BDNF-213ENST00000525950 CBWD1Q9BRT8 395 aa8.49□□□□□ -1.05
BDNF-213ENST00000525950 ZNF577Q9BSK1 485 aa8.49□□□□□ -1.05
BDNF-213ENST00000525950 DCLRE1BQ9H816 532 aa8.49□□□□□ -1.05
BDNF-213ENST00000525950 ANAPC7Q9UJX3 599 aa8.49□□□□□ -1.05
BDNF-213ENST00000525950 IZUMO3Q5VZ72 239 aa8.49□□□□□ -1.05
BDNF-213ENST00000525950 NAIF1Q69YI7 327 aaPredicted RBP8.49□□□□□ -1.05
BDNF-213ENST00000525950 USP37Q86T82 979 aa8.49□□□□□ -1.05
BDNF-213ENST00000525950 PPM1KQ8N3J5 372 aa8.49□□□□□ -1.05
BDNF-213ENST00000525950 EXD1Q8NHP7 514 aa8.49□□□□□ -1.05
BDNF-213ENST00000525950 ERP27Q96DN0 273 aa8.49□□□□□ -1.05
BDNF-213ENST00000525950 FBXL18Q96ME1 805 aa8.49□□□□□ -1.05
BDNF-213ENST00000525950 TBC1D10AQ9BXI6 508 aa8.49□□□□□ -1.05
BDNF-213ENST00000525950 NKX1-2Q9UD57 310 aaPredicted RBP8.49□□□□□ -1.05
BDNF-213ENST00000525950 EXOC7Q9UPT5 735 aa8.49□□□□□ -1.05
BDNF-213ENST00000525950 ZNFX1Q9P2E3 1918 aaKnown RBP8.49□□□□□ -1.05
BDNF-213ENST00000525950 ECM2O94769 699 aaPredicted RBP8.49□□□□□ -1.05
BDNF-213ENST00000525950 SERPINB2P05120 415 aa8.49□□□□□ -1.05
BDNF-213ENST00000525950 RRM1P23921 792 aa8.49□□□□□ -1.05
BDNF-213ENST00000525950 CRKP46108 304 aa8.49□□□□□ -1.05
BDNF-213ENST00000525950 BPIFB4P59827 614 aa8.49□□□□□ -1.05
BDNF-213ENST00000525950 SNX1Q13596 522 aa8.49□□□□□ -1.05
BDNF-213ENST00000525950 ABCB5Q2M3G0 1257 aa8.49□□□□□ -1.05
BDNF-213ENST00000525950 SMYD5Q6GMV2 418 aa8.49□□□□□ -1.05
BDNF-213ENST00000525950 ANO7Q6IWH7 933 aa8.49□□□□□ -1.05
BDNF-213ENST00000525950 ZFPM1Q8IX07 1006 aa8.49□□□□□ -1.05
BDNF-213ENST00000525950 RHOT1Q8IXI2 618 aa8.49□□□□□ -1.05
BDNF-213ENST00000525950 PARD3BQ8TEW8 1205 aa8.49□□□□□ -1.05
BDNF-213ENST00000525950 SEMA4DQ92854 862 aa8.49□□□□□ -1.05
BDNF-213ENST00000525950 MFSD14AQ96MC6 490 aa8.49□□□□□ -1.05
BDNF-213ENST00000525950 DRG1Q9Y295 367 aaKnown RBP8.49□□□□□ -1.05
BDNF-213ENST00000525950 DNALI1O14645 258 aaPredicted RBP8.48□□□□□ -1.05
BDNF-213ENST00000525950 TYROBPO43914 113 aa8.48□□□□□ -1.05
BDNF-213ENST00000525950 CYP1A1P04798 512 aaPredicted RBP8.48□□□□□ -1.05
BDNF-213ENST00000525950 RBBP8NLQ8NC74 664 aaPredicted RBP8.48□□□□□ -1.05
BDNF-213ENST00000525950 FBXL13Q8NEE6 735 aa8.48□□□□□ -1.05
BDNF-213ENST00000525950 RBM15Q96T37 977 aaKnown RBP eCLIP8.48□□□□□ -1.05
BDNF-213ENST00000525950 OSBPL1AQ9BXW6 950 aa8.48□□□□□ -1.05
BDNF-213ENST00000525950 PCIF1Q9H4Z3 704 aa8.48□□□□□ -1.05
BDNF-213ENST00000525950 MLXIPLQ9NP71 852 aa8.48□□□□□ -1.05
BDNF-213ENST00000525950 FAM198AQ9UFP1 575 aa8.48□□□□□ -1.05
BDNF-213ENST00000525950 CHORDC1Q9UHD1 332 aaPredicted RBP8.48□□□□□ -1.05
BDNF-213ENST00000525950 MRPL11Q9Y3B7 192 aaKnown RBP8.48□□□□□ -1.05
BDNF-213ENST00000525950 RGPD3A6NKT7 1758 aaPredicted RBP8.48□□□□□ -1.05
BDNF-213ENST00000525950 RGPD4Q7Z3J3 1758 aa8.48□□□□□ -1.05
BDNF-213ENST00000525950 A0A1W2PRG0 241 aa8.48□□□□□ -1.05
BDNF-213ENST00000525950 ANKRD33BA6NCL7 494 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms