RNA–Protein interactions for RNA: ENST00000525745.5

ECHDC1-218, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 601 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-218ENST00000525745 KIAA1586Q9HCI6 787 aa3.51□□□□□ -1.85
ECHDC1-218ENST00000525745 CASS4Q9NQ75 786 aa3.51□□□□□ -1.85
ECHDC1-218ENST00000525745 RBM12Q9NTZ6 932 aaKnown RBP3.51□□□□□ -1.85
ECHDC1-218ENST00000525745 TBCCD1Q9NVR7 557 aa3.51□□□□□ -1.85
ECHDC1-218ENST00000525745 C14orf119Q9NWQ9 140 aa3.51□□□□□ -1.85
ECHDC1-218ENST00000525745 AATKQ6ZMQ8 1374 aa3.51□□□□□ -1.85
ECHDC1-218ENST00000525745 MAST3O60307 1309 aa3.5□□□□□ -1.85
ECHDC1-218ENST00000525745 WASHC2AQ641Q2 1341 aa3.5□□□□□ -1.85
ECHDC1-218ENST00000525745 SALL3Q9BXA9 1300 aa3.5□□□□□ -1.85
ECHDC1-218ENST00000525745 ERN1O75460 977 aaKnown RBP3.5□□□□□ -1.85
ECHDC1-218ENST00000525745 GPANK1O95872 356 aa3.5□□□□□ -1.85
ECHDC1-218ENST00000525745 FPR1P21462 350 aa3.5□□□□□ -1.85
ECHDC1-218ENST00000525745 SLC6A2P23975 617 aa3.5□□□□□ -1.85
ECHDC1-218ENST00000525745 CDKN1CP49918 316 aaPredicted RBP3.5□□□□□ -1.85
ECHDC1-218ENST00000525745 CXADRP78310 365 aa3.5□□□□□ -1.85
ECHDC1-218ENST00000525745 SRSF2Q01130 221 aaKnown RBP3.5□□□□□ -1.85
ECHDC1-218ENST00000525745 UBXN2BQ14CS0 331 aa3.5□□□□□ -1.85
ECHDC1-218ENST00000525745 GJC2Q5T442 439 aaPredicted RBP3.5□□□□□ -1.85
ECHDC1-218ENST00000525745 SP5Q6BEB4 398 aaPredicted RBP3.5□□□□□ -1.85
ECHDC1-218ENST00000525745 FOXR2Q6PJQ5 311 aa3.5□□□□□ -1.85
ECHDC1-218ENST00000525745 Q6ZNX1 250 aa3.5□□□□□ -1.85
ECHDC1-218ENST00000525745 NECAB2Q7Z6G3 386 aa3.5□□□□□ -1.85
ECHDC1-218ENST00000525745 LMBR1Q8WVP7 490 aa3.5□□□□□ -1.85
ECHDC1-218ENST00000525745 SLC9A6Q92581 669 aa3.5□□□□□ -1.85
ECHDC1-218ENST00000525745 NELL1Q92832 810 aa3.5□□□□□ -1.85
ECHDC1-218ENST00000525745 DUSP26Q9BV47 211 aa3.5□□□□□ -1.85
ECHDC1-218ENST00000525745 SPATA5L1Q9BVQ7 753 aa3.5□□□□□ -1.85
ECHDC1-218ENST00000525745 GALNT9Q9HCQ5 603 aa3.5□□□□□ -1.85
ECHDC1-218ENST00000525745 HOMER2Q9NSB8 354 aa3.5□□□□□ -1.85
ECHDC1-218ENST00000525745 TMEM140Q9NV12 185 aa3.5□□□□□ -1.85
ECHDC1-218ENST00000525745 USP25Q9UHP3 1055 aa3.5□□□□□ -1.85
ECHDC1-218ENST00000525745 AJAP1Q9UKB5 411 aaPredicted RBP3.5□□□□□ -1.85
ECHDC1-218ENST00000525745 RUVBL1Q9Y265 456 aaKnown RBP3.5□□□□□ -1.85
ECHDC1-218ENST00000525745 SIK3Q9Y2K2 1263 aa3.5□□□□□ -1.85
ECHDC1-218ENST00000525745 MTO1Q9Y2Z2 717 aaKnown RBP3.5□□□□□ -1.85
ECHDC1-218ENST00000525745 CCDC78A2IDD5 438 aa3.49□□□□□ -1.85
ECHDC1-218ENST00000525745 KATNA1O75449 491 aa3.49□□□□□ -1.85
ECHDC1-218ENST00000525745 ENDOD1O94919 500 aa3.49□□□□□ -1.85
ECHDC1-218ENST00000525745 GSPT1P15170 499 aaKnown RBP3.49□□□□□ -1.85
ECHDC1-218ENST00000525745 GCSHP23434 173 aa3.49□□□□□ -1.85
ECHDC1-218ENST00000525745 GUCY1A2P33402 732 aa3.49□□□□□ -1.85
ECHDC1-218ENST00000525745 ELLP55199 621 aaPredicted RBP3.49□□□□□ -1.85
ECHDC1-218ENST00000525745 PPP3CAQ08209 521 aa3.49□□□□□ -1.85
ECHDC1-218ENST00000525745 COLEC12Q5KU26 742 aa3.49□□□□□ -1.85
ECHDC1-218ENST00000525745 PGM2L1Q6PCE3 622 aa3.49□□□□□ -1.85
ECHDC1-218ENST00000525745 UBE3BQ7Z3V4 1068 aa3.49□□□□□ -1.85
ECHDC1-218ENST00000525745 KCNK18Q7Z418 384 aa3.49□□□□□ -1.85
ECHDC1-218ENST00000525745 ARHGEF25Q86VW2 580 aa3.49□□□□□ -1.85
ECHDC1-218ENST00000525745 AMOTL1Q8IY63 956 aa3.49□□□□□ -1.85
ECHDC1-218ENST00000525745 CCHCR1Q8TD31 782 aa3.49□□□□□ -1.85
ECHDC1-218ENST00000525745 PTCD3Q96EY7 689 aaKnown RBP3.49□□□□□ -1.85
ECHDC1-218ENST00000525745 MYOCQ99972 504 aa3.49□□□□□ -1.85
ECHDC1-218ENST00000525745 LRFN3Q9BTN0 628 aa3.49□□□□□ -1.85
ECHDC1-218ENST00000525745 CCDC8Q9H0W5 538 aaPredicted RBP3.49□□□□□ -1.85
ECHDC1-218ENST00000525745 FBXO34Q9NWN3 711 aa3.49□□□□□ -1.85
ECHDC1-218ENST00000525745 DNAJC28Q9NX36 388 aa3.49□□□□□ -1.85
ECHDC1-218ENST00000525745 LRIT1Q9P2V4 623 aa3.49□□□□□ -1.85
ECHDC1-218ENST00000525745 SCOCQ9UIL1 159 aa3.49□□□□□ -1.85
ECHDC1-218ENST00000525745 KCNE5Q9UJ90 142 aa3.49□□□□□ -1.85
ECHDC1-218ENST00000525745 ACTL7AQ9Y615 435 aa3.49□□□□□ -1.85
ECHDC1-218ENST00000525745 MGST3O14880 152 aa3.48□□□□□ -1.85
ECHDC1-218ENST00000525745 PRSS23O95084 383 aa3.48□□□□□ -1.85
ECHDC1-218ENST00000525745 C1RP00736 705 aa3.48□□□□□ -1.85
ECHDC1-218ENST00000525745 OSMP13725 252 aa3.48□□□□□ -1.85
ECHDC1-218ENST00000525745 CCND1P24385 295 aa3.48□□□□□ -1.85
ECHDC1-218ENST00000525745 MCAMP43121 646 aa3.48□□□□□ -1.85
ECHDC1-218ENST00000525745 GPR3P46089 330 aa3.48□□□□□ -1.85
ECHDC1-218ENST00000525745 SLC5A3P53794 718 aa3.48□□□□□ -1.85
ECHDC1-218ENST00000525745 SIM1P81133 766 aaPredicted RBP3.48□□□□□ -1.85
ECHDC1-218ENST00000525745 MRPS35P82673 323 aaKnown RBP3.48□□□□□ -1.85
ECHDC1-218ENST00000525745 MALLQ13021 153 aa3.48□□□□□ -1.85
ECHDC1-218ENST00000525745 HNRNPA0Q13151 305 aaKnown RBP3.48□□□□□ -1.85
ECHDC1-218ENST00000525745 KLF1Q13351 362 aaPredicted RBP3.48□□□□□ -1.85
ECHDC1-218ENST00000525745 MTMR1Q13613 665 aa3.48□□□□□ -1.85
ECHDC1-218ENST00000525745 ZNF169Q14929 603 aaPredicted RBP3.48□□□□□ -1.85
ECHDC1-218ENST00000525745 CLUL1Q15846 466 aa3.48□□□□□ -1.85
ECHDC1-218ENST00000525745 ANO4Q32M45 955 aa3.48□□□□□ -1.85
ECHDC1-218ENST00000525745 SYDE2Q5VT97 1194 aa3.48□□□□□ -1.85
ECHDC1-218ENST00000525745 OTUD7BQ6GQQ9 843 aa3.48□□□□□ -1.85
ECHDC1-218ENST00000525745 FAM43AQ8N2R8 423 aa3.48□□□□□ -1.85
ECHDC1-218ENST00000525745 FAM98AQ8NCA5 519 aaKnown RBP3.48□□□□□ -1.85
ECHDC1-218ENST00000525745 ACTRT2Q8TDY3 377 aa3.48□□□□□ -1.85
ECHDC1-218ENST00000525745 HOXB13Q92826 284 aaPredicted RBP3.48□□□□□ -1.85
ECHDC1-218ENST00000525745 MTMR8Q96EF0 704 aa3.48□□□□□ -1.85
ECHDC1-218ENST00000525745 BOD1Q96IK1 185 aa3.48□□□□□ -1.85
ECHDC1-218ENST00000525745 ORAI2Q96SN7 254 aa3.48□□□□□ -1.85
ECHDC1-218ENST00000525745 AIFM2Q9BRQ8 373 aa3.48□□□□□ -1.85
ECHDC1-218ENST00000525745 SLC23A1Q9UHI7 598 aa3.48□□□□□ -1.85
ECHDC1-218ENST00000525745 DNM3Q9UQ16 869 aa3.48□□□□□ -1.85
ECHDC1-218ENST00000525745 PCDHGA2Q9Y5H1 932 aa3.48□□□□□ -1.85
ECHDC1-218ENST00000525745 TOP2AP11388 1531 aaKnown RBP3.48□□□□□ -1.85
ECHDC1-218ENST00000525745 BAZ1BQ9UIG0 1483 aaKnown RBP3.47□□□□□ -1.85
ECHDC1-218ENST00000525745 CDHR4A6H8M9 788 aa3.47□□□□□ -1.85
ECHDC1-218ENST00000525745 K7ESF4 209 aa3.47□□□□□ -1.85
ECHDC1-218ENST00000525745 TEX33O43247 280 aa3.47□□□□□ -1.85
ECHDC1-218ENST00000525745 GPR32O75388 356 aa3.47□□□□□ -1.85
ECHDC1-218ENST00000525745 IGLV2-14P01704 120 aa3.47□□□□□ -1.85
ECHDC1-218ENST00000525745 MYBL2P10244 700 aa3.47□□□□□ -1.85
ECHDC1-218ENST00000525745 CDK4P11802 303 aa3.47□□□□□ -1.85
ECHDC1-218ENST00000525745 CKBP12277 381 aa3.47□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms