RNA–Protein interactions for RNA: ENST00000525685.5

CD44-219, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 728 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-219ENST00000525685 HTRA2O43464 458 aaPredicted RBP4.94□□□□□ -1.62
CD44-219ENST00000525685 TSPAN6O43657 245 aa4.94□□□□□ -1.62
CD44-219ENST00000525685 RAP2AP10114 183 aa4.94□□□□□ -1.62
CD44-219ENST00000525685 IL2RBP14784 551 aa4.94□□□□□ -1.62
CD44-219ENST00000525685 NR4A1P22736 598 aa4.94□□□□□ -1.62
CD44-219ENST00000525685 PTGS2P35354 604 aa4.94□□□□□ -1.62
CD44-219ENST00000525685 CREMQ03060 361 aa4.94□□□□□ -1.62
CD44-219ENST00000525685 IL10RAQ13651 578 aa4.94□□□□□ -1.62
CD44-219ENST00000525685 MLC1Q15049 377 aa4.94□□□□□ -1.62
CD44-219ENST00000525685 RRP12Q5JTH9 1297 aaKnown RBP4.94□□□□□ -1.62
CD44-219ENST00000525685 PPP4R4Q6NUP7 873 aa4.94□□□□□ -1.62
CD44-219ENST00000525685 PCSK4Q6UW60 755 aa4.94□□□□□ -1.62
CD44-219ENST00000525685 DOK3Q7L591 496 aa4.94□□□□□ -1.62
CD44-219ENST00000525685 CATIPQ7Z7H3 387 aa4.94□□□□□ -1.62
CD44-219ENST00000525685 FAM83AQ86UY5 434 aa4.94□□□□□ -1.62
CD44-219ENST00000525685 CAMKK1Q8N5S9 505 aa4.94□□□□□ -1.62
CD44-219ENST00000525685 REPS2Q8NFH8 660 aa4.94□□□□□ -1.62
CD44-219ENST00000525685 DDX55Q8NHQ9 600 aaKnown RBP eCLIP4.94□□□□□ -1.62
CD44-219ENST00000525685 HAS1Q92839 578 aa4.94□□□□□ -1.62
CD44-219ENST00000525685 KAT5Q92993 513 aa4.94□□□□□ -1.62
CD44-219ENST00000525685 TSR2Q969E8 191 aaKnown RBP4.94□□□□□ -1.62
CD44-219ENST00000525685 CYFIP2Q96F07 1278 aa4.94□□□□□ -1.62
CD44-219ENST00000525685 TMX3Q96JJ7 454 aa4.94□□□□□ -1.62
CD44-219ENST00000525685 CAMKK2Q96RR4 588 aa4.94□□□□□ -1.62
CD44-219ENST00000525685 PRRX2Q99811 253 aa4.94□□□□□ -1.62
CD44-219ENST00000525685 SPON1Q9HCB6 807 aa4.94□□□□□ -1.62
CD44-219ENST00000525685 MOCS1Q9NZB8 636 aa4.94□□□□□ -1.62
CD44-219ENST00000525685 SCOCQ9UIL1 159 aa4.94□□□□□ -1.62
CD44-219ENST00000525685 AJAP1Q9UKB5 411 aaPredicted RBP4.94□□□□□ -1.62
CD44-219ENST00000525685 LIMCH1Q9UPQ0 1083 aa4.94□□□□□ -1.62
CD44-219ENST00000525685 SORCS3Q9UPU3 1222 aa4.94□□□□□ -1.62
CD44-219ENST00000525685 FHOD3Q2V2M9 1422 aa4.94□□□□□ -1.62
CD44-219ENST00000525685 UACAQ9BZF9 1416 aa4.94□□□□□ -1.62
CD44-219ENST00000525685 PLB1Q6P1J6 1458 aa4.94□□□□□ -1.62
CD44-219ENST00000525685 ARHGAP35Q9NRY4 1499 aa4.94□□□□□ -1.62
CD44-219ENST00000525685 ZCCHC11Q5TAX3 1644 aaKnown RBP4.94□□□□□ -1.62
CD44-219ENST00000525685 RAPGEF6Q8TEU7 1601 aa4.94□□□□□ -1.62
CD44-219ENST00000525685 TRIM24O15164 1050 aa4.93□□□□□ -1.62
CD44-219ENST00000525685 ADCY6O43306 1168 aa4.93□□□□□ -1.62
CD44-219ENST00000525685 RFPL1O75677 317 aa4.93□□□□□ -1.62
CD44-219ENST00000525685 ZRANB2O95218 330 aaKnown RBP eCLIP4.93□□□□□ -1.62
CD44-219ENST00000525685 PARNO95453 639 aaKnown RBP4.93□□□□□ -1.62
CD44-219ENST00000525685 POU2F2P09086 479 aa4.93□□□□□ -1.62
CD44-219ENST00000525685 SMARCA1P28370 1054 aa4.93□□□□□ -1.62
CD44-219ENST00000525685 GTF2H3Q13889 308 aa4.93□□□□□ -1.62
CD44-219ENST00000525685 VPS72Q15906 364 aa4.93□□□□□ -1.62
CD44-219ENST00000525685 C3orf36Q3SXR2 165 aa4.93□□□□□ -1.62
CD44-219ENST00000525685 MINDY4Q4G0A6 757 aa4.93□□□□□ -1.62
CD44-219ENST00000525685 ARHGAP29Q52LW3 1261 aa4.93□□□□□ -1.62
CD44-219ENST00000525685 HSP90AB2PQ58FF8 381 aa4.93□□□□□ -1.62
CD44-219ENST00000525685 PRAMEF14Q5SWL7 426 aa4.93□□□□□ -1.62
CD44-219ENST00000525685 FAM102BQ5T8I3 360 aa4.93□□□□□ -1.62
CD44-219ENST00000525685 THEMIS2Q5TEJ8 643 aa4.93□□□□□ -1.62
CD44-219ENST00000525685 CXorf57Q6NSI4 855 aaKnown RBP4.93□□□□□ -1.62
CD44-219ENST00000525685 Q6ZVL8 140 aa4.93□□□□□ -1.62
CD44-219ENST00000525685 USP45Q70EL2 814 aa4.93□□□□□ -1.62
CD44-219ENST00000525685 GPRIN1Q7Z2K8 1008 aa4.93□□□□□ -1.62
CD44-219ENST00000525685 MRGPRGQ86SM5 289 aa4.93□□□□□ -1.62
CD44-219ENST00000525685 TTC7BQ86TV6 843 aa4.93□□□□□ -1.62
CD44-219ENST00000525685 LILRA3Q8N6C8 439 aaPredicted RBP4.93□□□□□ -1.62
CD44-219ENST00000525685 CPT1CQ8TCG5 803 aa4.93□□□□□ -1.62
CD44-219ENST00000525685 RAB24Q969Q5 203 aa4.93□□□□□ -1.62
CD44-219ENST00000525685 CLPTM1LQ96KA5 538 aa4.93□□□□□ -1.62
CD44-219ENST00000525685 NMRK2Q9NPI5 230 aa4.93□□□□□ -1.62
CD44-219ENST00000525685 MAN1C1Q9NR34 630 aa4.93□□□□□ -1.62
CD44-219ENST00000525685 SERPINB13Q9UIV8 391 aa4.93□□□□□ -1.62
CD44-219ENST00000525685 FZD1Q9UP38 647 aa4.93□□□□□ -1.62
CD44-219ENST00000525685 RUVBL1Q9Y265 456 aaKnown RBP4.93□□□□□ -1.62
CD44-219ENST00000525685 TTBK1Q5TCY1 1321 aaPredicted RBP4.93□□□□□ -1.62
CD44-219ENST00000525685 MYBBP1AQ9BQG0 1328 aaKnown RBP4.93□□□□□ -1.62
CD44-219ENST00000525685 KDM5BQ9UGL1 1544 aa4.92□□□□□ -1.62
CD44-219ENST00000525685 ZMYM3Q14202 1370 aa4.92□□□□□ -1.62
CD44-219ENST00000525685 PRR5-ARHGAP8B1AHC4 643 aa4.92□□□□□ -1.62
CD44-219ENST00000525685 TEX33O43247 280 aa4.92□□□□□ -1.62
CD44-219ENST00000525685 GPR32O75388 356 aa4.92□□□□□ -1.62
CD44-219ENST00000525685 DDCP20711 480 aa4.92□□□□□ -1.62
CD44-219ENST00000525685 SREBF1P36956 1147 aa4.92□□□□□ -1.62
CD44-219ENST00000525685 WASP42768 502 aa4.92□□□□□ -1.62
CD44-219ENST00000525685 PTTG1IPP53801 180 aa4.92□□□□□ -1.62
CD44-219ENST00000525685 RAP2BP61225 183 aa4.92□□□□□ -1.62
CD44-219ENST00000525685 SEPT2Q15019 361 aa4.92□□□□□ -1.62
CD44-219ENST00000525685 PGS1Q32NB8 556 aa4.92□□□□□ -1.62
CD44-219ENST00000525685 XYLT1Q86Y38 959 aa4.92□□□□□ -1.62
CD44-219ENST00000525685 OR2I1PQ8NGU4 316 aa4.92□□□□□ -1.62
CD44-219ENST00000525685 KRTAP17-1Q9BYP8 105 aa4.92□□□□□ -1.62
CD44-219ENST00000525685 KCNH6Q9H252 994 aa4.92□□□□□ -1.62
CD44-219ENST00000525685 KMT5AQ9NQR1 393 aa4.92□□□□□ -1.62
CD44-219ENST00000525685 POGKQ9P215 609 aa4.92□□□□□ -1.62
CD44-219ENST00000525685 NIPSNAP3AQ9UFN0 247 aaPredicted RBP4.92□□□□□ -1.62
CD44-219ENST00000525685 CFAP20Q9Y6A4 193 aaKnown RBP4.92□□□□□ -1.62
CD44-219ENST00000525685 KIF13AQ9H1H9 1805 aa4.92□□□□□ -1.62
CD44-219ENST00000525685 DIP2BQ9P265 1576 aa4.91□□□□□ -1.62
CD44-219ENST00000525685 AHRRA9YTQ3 701 aa4.91□□□□□ -1.62
CD44-219ENST00000525685 CTNND1O60716 968 aaKnown RBP4.91□□□□□ -1.62
CD44-219ENST00000525685 RECQL4O94761 1208 aa4.91□□□□□ -1.62
CD44-219ENST00000525685 SCAF4O95104 1147 aaKnown RBP4.91□□□□□ -1.62
CD44-219ENST00000525685 FTLP02792 175 aaPredicted RBP4.91□□□□□ -1.62
CD44-219ENST00000525685 ITGB1P05556 798 aa4.91□□□□□ -1.62
CD44-219ENST00000525685 ATP5JP18859 108 aa4.91□□□□□ -1.62
CD44-219ENST00000525685 ZFP36P26651 326 aaKnown RBP4.91□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms