RNA–Protein interactions for RNA: ENST00000525670.5

SVIP-202, Transcript of small VCP interacting protein, humanhuman

TSL 2

Gene SVIP, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVIP-202ENST00000525670 VASNQ6EMK4 673 aa6.11□□□□□ -1.43
SVIP-202ENST00000525670 KCNT2Q6UVM3 1135 aa6.11□□□□□ -1.43
SVIP-202ENST00000525670 NSMFQ6X4W1 530 aa6.11□□□□□ -1.43
SVIP-202ENST00000525670 KBTBD2Q8IY47 623 aa6.11□□□□□ -1.43
SVIP-202ENST00000525670 SCYL3Q8IZE3 742 aa6.11□□□□□ -1.43
SVIP-202ENST00000525670 JMYQ8N9B5 988 aa6.11□□□□□ -1.43
SVIP-202ENST00000525670 UHMK1Q8TAS1 419 aaKnown RBP6.11□□□□□ -1.43
SVIP-202ENST00000525670 BRI3BPQ8WY22 251 aa6.11□□□□□ -1.43
SVIP-202ENST00000525670 DVL3Q92997 716 aaPredicted RBP6.11□□□□□ -1.43
SVIP-202ENST00000525670 EVI5LQ96CN4 794 aa6.11□□□□□ -1.43
SVIP-202ENST00000525670 FEZ1Q99689 392 aa6.11□□□□□ -1.43
SVIP-202ENST00000525670 MRIQ9BWK5 157 aa6.11□□□□□ -1.43
SVIP-202ENST00000525670 IL25Q9H293 177 aa6.11□□□□□ -1.43
SVIP-202ENST00000525670 BARX1Q9HBU1 254 aaPredicted RBP6.11□□□□□ -1.43
SVIP-202ENST00000525670 DLL4Q9NR61 685 aa6.11□□□□□ -1.43
SVIP-202ENST00000525670 DIAPH3Q9NSV4 1193 aa6.11□□□□□ -1.43
SVIP-202ENST00000525670 RNF186Q9NXI6 227 aa6.11□□□□□ -1.43
SVIP-202ENST00000525670 RBPJLQ9UBG7 517 aa6.11□□□□□ -1.43
SVIP-202ENST00000525670 STAP2Q9UGK3 403 aa6.11□□□□□ -1.43
SVIP-202ENST00000525670 ISY1Q9ULR0 285 aaKnown RBP6.11□□□□□ -1.43
SVIP-202ENST00000525670 ZHX2Q9Y6X8 837 aa6.11□□□□□ -1.43
SVIP-202ENST00000525670 HTTP42858 3142 aa6.11□□□□□ -1.43
SVIP-202ENST00000525670 LAMA4Q16363 1823 aa6.11□□□□□ -1.43
SVIP-202ENST00000525670 LOC285556D6RIA3 1793 aa6.11□□□□□ -1.43
SVIP-202ENST00000525670 COL6A1P12109 1028 aa6.1□□□□□ -1.43
SVIP-202ENST00000525670 COL6A2P12110 1019 aa6.1□□□□□ -1.43
SVIP-202ENST00000525670 AKR1B1P15121 316 aa6.1□□□□□ -1.43
SVIP-202ENST00000525670 FAHP16930 419 aa6.1□□□□□ -1.43
SVIP-202ENST00000525670 TNFRSF1AP19438 455 aa6.1□□□□□ -1.43
SVIP-202ENST00000525670 SDSP20132 328 aa6.1□□□□□ -1.43
SVIP-202ENST00000525670 GRK2P25098 689 aa6.1□□□□□ -1.43
SVIP-202ENST00000525670 SHMT1P34896 483 aa6.1□□□□□ -1.43
SVIP-202ENST00000525670 GRK3P35626 688 aa6.1□□□□□ -1.43
SVIP-202ENST00000525670 EPHB4P54760 987 aa6.1□□□□□ -1.43
SVIP-202ENST00000525670 HMGCS2P54868 508 aa6.1□□□□□ -1.43
SVIP-202ENST00000525670 GPR85P60893 370 aa6.1□□□□□ -1.43
SVIP-202ENST00000525670 MAP2K1Q02750 393 aaPredicted RBP6.1□□□□□ -1.43
SVIP-202ENST00000525670 SREBF2Q12772 1141 aa6.1□□□□□ -1.43
SVIP-202ENST00000525670 TUSC3Q13454 348 aa6.1□□□□□ -1.43
SVIP-202ENST00000525670 RAB33AQ14088 237 aa6.1□□□□□ -1.43
SVIP-202ENST00000525670 NTRK3Q16288 839 aa6.1□□□□□ -1.43
SVIP-202ENST00000525670 RRP12Q5JTH9 1297 aaKnown RBP6.1□□□□□ -1.43
SVIP-202ENST00000525670 TREML2Q5T2D2 321 aa6.1□□□□□ -1.43
SVIP-202ENST00000525670 CTR9Q6PD62 1173 aa6.1□□□□□ -1.43
SVIP-202ENST00000525670 ARHGEF18Q6ZSZ5 1173 aa6.1□□□□□ -1.43
SVIP-202ENST00000525670 CENPQQ7L2Z9 268 aaPredicted RBP6.1□□□□□ -1.43
SVIP-202ENST00000525670 RASGRP2Q7LDG7 609 aa6.1□□□□□ -1.43
SVIP-202ENST00000525670 RBM12BQ8IXT5 1001 aaKnown RBP6.1□□□□□ -1.43
SVIP-202ENST00000525670 AMOTL1Q8IY63 956 aa6.1□□□□□ -1.43
SVIP-202ENST00000525670 IFNL3Q8IZI9 196 aa6.1□□□□□ -1.43
SVIP-202ENST00000525670 LRRC47Q8N1G4 583 aaKnown RBP6.1□□□□□ -1.43
SVIP-202ENST00000525670 FAM43AQ8N2R8 423 aa6.1□□□□□ -1.43
SVIP-202ENST00000525670 DTX3Q8N9I9 347 aa6.1□□□□□ -1.43
SVIP-202ENST00000525670 IGDCC4Q8TDY8 1250 aa6.1□□□□□ -1.43
SVIP-202ENST00000525670 HOOK2Q96ED9 719 aa6.1□□□□□ -1.43
SVIP-202ENST00000525670 STRBPQ96SI9 672 aaKnown RBP6.1□□□□□ -1.43
SVIP-202ENST00000525670 NAPBQ9H115 298 aa6.1□□□□□ -1.43
SVIP-202ENST00000525670 INCENPQ9NQS7 918 aa6.1□□□□□ -1.43
SVIP-202ENST00000525670 TOMM22Q9NS69 142 aa6.1□□□□□ -1.43
SVIP-202ENST00000525670 PI4KBQ9UBF8 816 aa6.1□□□□□ -1.43
SVIP-202ENST00000525670 SERPINB13Q9UIV8 391 aa6.1□□□□□ -1.43
SVIP-202ENST00000525670 ST6GALNAC2Q9UJ37 374 aa6.1□□□□□ -1.43
SVIP-202ENST00000525670 ZBTB21Q9ULJ3 1066 aa6.1□□□□□ -1.43
SVIP-202ENST00000525670 ZDHHC9Q9Y397 364 aa6.1□□□□□ -1.43
SVIP-202ENST00000525670 MYH4Q9Y623 1939 aa6.09□□□□□ -1.43
SVIP-202ENST00000525670 CCDC171Q6TFL3 1326 aa6.09□□□□□ -1.43
SVIP-202ENST00000525670 TRAV20A0A0B4J274 112 aa6.09□□□□□ -1.43
SVIP-202ENST00000525670 GSG1L2A8MUP6 293 aa6.09□□□□□ -1.43
SVIP-202ENST00000525670 BTBD19C9JJ37 291 aa6.09□□□□□ -1.43
SVIP-202ENST00000525670 FOXP2O15409 715 aa6.09□□□□□ -1.43
SVIP-202ENST00000525670 B4GALT4O60513 344 aa6.09□□□□□ -1.43
SVIP-202ENST00000525670 CKMP06732 381 aa6.09□□□□□ -1.43
SVIP-202ENST00000525670 ENO2P09104 434 aaPredicted RBP6.09□□□□□ -1.43
SVIP-202ENST00000525670 GNAT1P11488 350 aa6.09□□□□□ -1.43
SVIP-202ENST00000525670 CTCFP49711 727 aaPredicted RBP6.09□□□□□ -1.43
SVIP-202ENST00000525670 IFRD2Q12894 506 aaPredicted RBP6.09□□□□□ -1.43
SVIP-202ENST00000525670 SPP2Q13103 211 aa6.09□□□□□ -1.43
SVIP-202ENST00000525670 CRHR2Q13324 411 aa6.09□□□□□ -1.43
SVIP-202ENST00000525670 PPIL2Q13356 520 aa6.09□□□□□ -1.43
SVIP-202ENST00000525670 SEPT2Q15019 361 aa6.09□□□□□ -1.43
SVIP-202ENST00000525670 ABCB5Q2M3G0 1257 aa6.09□□□□□ -1.43
SVIP-202ENST00000525670 CERKLQ49MI3 558 aaPredicted RBP6.09□□□□□ -1.43
SVIP-202ENST00000525670 PAN2Q504Q3 1202 aaKnown RBP6.09□□□□□ -1.43
SVIP-202ENST00000525670 FAM47AQ5JRC9 791 aa6.09□□□□□ -1.43
SVIP-202ENST00000525670 HABP4Q5JVS0 413 aaKnown RBP6.09□□□□□ -1.43
SVIP-202ENST00000525670 DPH6Q7L8W6 267 aa6.09□□□□□ -1.43
SVIP-202ENST00000525670 ERO1BQ86YB8 467 aa6.09□□□□□ -1.43
SVIP-202ENST00000525670 SPICE1Q8N0Z3 855 aa6.09□□□□□ -1.43
SVIP-202ENST00000525670 PUM2Q8TB72 1066 aaKnown RBP eCLIP6.09□□□□□ -1.43
SVIP-202ENST00000525670 ACER1Q8TDN7 264 aa6.09□□□□□ -1.43
SVIP-202ENST00000525670 ZNF669Q96BR6 464 aaPredicted RBP6.09□□□□□ -1.43
SVIP-202ENST00000525670 KCNJ15Q99712 375 aa6.09□□□□□ -1.43
SVIP-202ENST00000525670 PTPN18Q99952 460 aa6.09□□□□□ -1.43
SVIP-202ENST00000525670 CPA4Q9UI42 421 aa6.09□□□□□ -1.43
SVIP-202ENST00000525670 NEDD4P46934 1319 aa6.08□□□□□ -1.44
SVIP-202ENST00000525670 MANSC4A6NHS7 340 aaPredicted RBP6.08□□□□□ -1.44
SVIP-202ENST00000525670 NKRFO15226 690 aaKnown RBP eCLIP6.08□□□□□ -1.44
SVIP-202ENST00000525670 MATN3O15232 486 aa6.08□□□□□ -1.44
SVIP-202ENST00000525670 GPR42O15529 346 aa6.08□□□□□ -1.44
SVIP-202ENST00000525670 SOD2P04179 222 aa6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms