RNA–Protein interactions for RNA: ENST00000524797.1

TRAPPC4-204, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 1,924 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-204ENST00000524797 M0R296 226 aa12.17□□□□□ -0.46
TRAPPC4-204ENST00000524797 OGTO15294 1046 aa12.17□□□□□ -0.46
TRAPPC4-204ENST00000524797 TRAPPC3O43617 180 aa12.17□□□□□ -0.46
TRAPPC4-204ENST00000524797 FAM189A1O60320 539 aa12.17□□□□□ -0.46
TRAPPC4-204ENST00000524797 PPP6R2O75170 966 aa12.17□□□□□ -0.46
TRAPPC4-204ENST00000524797 YEATS4O95619 227 aa12.17□□□□□ -0.46
TRAPPC4-204ENST00000524797 HSP90AA1P07900 732 aaKnown RBP12.17□□□□□ -0.46
TRAPPC4-204ENST00000524797 ZSCAN22P10073 491 aaPredicted RBP12.17□□□□□ -0.46
TRAPPC4-204ENST00000524797 ZC2HC1CQ53FD0 456 aaPredicted RBP12.17□□□□□ -0.46
TRAPPC4-204ENST00000524797 TRIM67Q6ZTA4 783 aa12.17□□□□□ -0.46
TRAPPC4-204ENST00000524797 SMG7Q92540 1137 aaKnown RBP12.17□□□□□ -0.46
TRAPPC4-204ENST00000524797 HVCN1Q96D96 273 aa12.17□□□□□ -0.46
TRAPPC4-204ENST00000524797 PANK2Q9BZ23 570 aa12.17□□□□□ -0.46
TRAPPC4-204ENST00000524797 BACE2Q9Y5Z0 518 aa12.17□□□□□ -0.46
TRAPPC4-204ENST00000524797 TCHHQ07283 1943 aa12.17□□□□□ -0.46
TRAPPC4-204ENST00000524797 NOTCH4Q99466 2003 aa12.17□□□□□ -0.46
TRAPPC4-204ENST00000524797 LACTBL1A8MY62 500 aa12.17□□□□□ -0.46
TRAPPC4-204ENST00000524797 ZMYND10O75800 440 aa12.17□□□□□ -0.46
TRAPPC4-204ENST00000524797 PPP1R37O75864 691 aa12.17□□□□□ -0.46
TRAPPC4-204ENST00000524797 F13A1P00488 732 aa12.17□□□□□ -0.46
TRAPPC4-204ENST00000524797 PDIA4P13667 645 aaKnown RBP12.17□□□□□ -0.46
TRAPPC4-204ENST00000524797 GAP43P17677 238 aa12.17□□□□□ -0.46
TRAPPC4-204ENST00000524797 SPAG1Q07617 926 aa12.17□□□□□ -0.46
TRAPPC4-204ENST00000524797 RAB33AQ14088 237 aa12.17□□□□□ -0.46
TRAPPC4-204ENST00000524797 ENOX2Q16206 610 aaKnown RBP12.17□□□□□ -0.46
TRAPPC4-204ENST00000524797 ZNF720Q7Z2F6 126 aa12.17□□□□□ -0.46
TRAPPC4-204ENST00000524797 PLCD3Q8N3E9 789 aa12.17□□□□□ -0.46
TRAPPC4-204ENST00000524797 TMEM130Q8N3G9 435 aa12.17□□□□□ -0.46
TRAPPC4-204ENST00000524797 MSTO1Q9BUK6 570 aa12.17□□□□□ -0.46
TRAPPC4-204ENST00000524797 PRKD2Q9BZL6 878 aa12.17□□□□□ -0.46
TRAPPC4-204ENST00000524797 WDR6Q9NNW5 1121 aaKnown RBP12.17□□□□□ -0.46
TRAPPC4-204ENST00000524797 SEL1LQ9UBV2 794 aa12.17□□□□□ -0.46
TRAPPC4-204ENST00000524797 HCN4Q9Y3Q4 1203 aa12.17□□□□□ -0.46
TRAPPC4-204ENST00000524797 CLUHO75153 1309 aa12.17□□□□□ -0.46
TRAPPC4-204ENST00000524797 C5orf42Q9H799 3197 aa12.17□□□□□ -0.46
TRAPPC4-204ENST00000524797 TSC2P49815 1807 aa12.17□□□□□ -0.46
TRAPPC4-204ENST00000524797 CUTAO60888 179 aa12.16□□□□□ -0.46
TRAPPC4-204ENST00000524797 ADRB2P07550 413 aa12.16□□□□□ -0.46
TRAPPC4-204ENST00000524797 LRPAP1P30533 357 aa12.16□□□□□ -0.46
TRAPPC4-204ENST00000524797 OR1D2P34982 312 aa12.16□□□□□ -0.46
TRAPPC4-204ENST00000524797 PPP2R3AQ06190 1150 aa12.16□□□□□ -0.46
TRAPPC4-204ENST00000524797 SIGLEC14Q08ET2 396 aa12.16□□□□□ -0.46
TRAPPC4-204ENST00000524797 ZBTB6Q15916 424 aa12.16□□□□□ -0.46
TRAPPC4-204ENST00000524797 RSPO2Q6UXX9 243 aaPredicted RBP12.16□□□□□ -0.46
TRAPPC4-204ENST00000524797 HFE2Q6ZVN8 426 aa12.16□□□□□ -0.46
TRAPPC4-204ENST00000524797 ANKS3Q6ZW76 656 aa12.16□□□□□ -0.46
TRAPPC4-204ENST00000524797 OTOP3Q7RTS5 596 aa12.16□□□□□ -0.46
TRAPPC4-204ENST00000524797 ACSF2Q96CM8 615 aaPredicted RBP12.16□□□□□ -0.46
TRAPPC4-204ENST00000524797 KIF12Q96FN5 646 aa12.16□□□□□ -0.46
TRAPPC4-204ENST00000524797 STRA6Q9BX79 667 aa12.16□□□□□ -0.46
TRAPPC4-204ENST00000524797 RPF1Q9H9Y2 349 aaKnown RBP12.16□□□□□ -0.46
TRAPPC4-204ENST00000524797 LIMD1Q9UGP4 676 aa12.16□□□□□ -0.46
TRAPPC4-204ENST00000524797 CPSF3Q9UKF6 684 aaKnown RBP12.16□□□□□ -0.46
TRAPPC4-204ENST00000524797 STYXL1Q9Y6J8 313 aa12.16□□□□□ -0.46
TRAPPC4-204ENST00000524797 TISP43B9A030 160 aa12.15□□□□□ -0.46
TRAPPC4-204ENST00000524797 SYN3O14994 580 aa12.15□□□□□ -0.46
TRAPPC4-204ENST00000524797 VARS2Q5ST30 1063 aaKnown RBP12.15□□□□□ -0.46
TRAPPC4-204ENST00000524797 LIN9Q5TKA1 542 aa12.15□□□□□ -0.46
TRAPPC4-204ENST00000524797 BMP8AQ7Z5Y6 402 aa12.15□□□□□ -0.46
TRAPPC4-204ENST00000524797 PDILTQ8N807 584 aa12.15□□□□□ -0.46
TRAPPC4-204ENST00000524797 SPRYD3Q8NCJ5 442 aa12.15□□□□□ -0.46
TRAPPC4-204ENST00000524797 SUSD3Q96L08 255 aa12.15□□□□□ -0.46
TRAPPC4-204ENST00000524797 IKZF4Q9H2S9 585 aa12.15□□□□□ -0.46
TRAPPC4-204ENST00000524797 PIDD1Q9HB75 910 aa12.15□□□□□ -0.46
TRAPPC4-204ENST00000524797 TBC1D7Q9P0N9 293 aa12.15□□□□□ -0.46
TRAPPC4-204ENST00000524797 UBQLN1Q9UMX0 589 aaKnown RBP12.15□□□□□ -0.46
TRAPPC4-204ENST00000524797 SORCS3Q9UPU3 1222 aa12.15□□□□□ -0.46
TRAPPC4-204ENST00000524797 NUB1Q9Y5A7 615 aa12.15□□□□□ -0.46
TRAPPC4-204ENST00000524797 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.15□□□□□ -0.46
TRAPPC4-204ENST00000524797 CDY1Q9Y6F8 540 aa12.15□□□□□ -0.46
TRAPPC4-204ENST00000524797 ZNF318Q5VUA4 2279 aa12.15□□□□□ -0.46
TRAPPC4-204ENST00000524797 SCN1AP35498 2009 aa12.15□□□□□ -0.46
TRAPPC4-204ENST00000524797 FRMD3A2A2Y4 597 aa12.15□□□□□ -0.46
TRAPPC4-204ENST00000524797 TBC1D4O60343 1298 aa12.15□□□□□ -0.46
TRAPPC4-204ENST00000524797 ASGR2P07307 311 aa12.15□□□□□ -0.46
TRAPPC4-204ENST00000524797 C8AP07357 584 aa12.15□□□□□ -0.46
TRAPPC4-204ENST00000524797 HNRNPA1P09651 372 aaKnown RBP eCLIP12.15□□□□□ -0.46
TRAPPC4-204ENST00000524797 CYP3A5P20815 502 aa12.15□□□□□ -0.46
TRAPPC4-204ENST00000524797 MCM4P33991 863 aa12.15□□□□□ -0.46
TRAPPC4-204ENST00000524797 PKP1Q13835 747 aa12.15□□□□□ -0.46
TRAPPC4-204ENST00000524797 E2F4Q16254 413 aa12.15□□□□□ -0.46
TRAPPC4-204ENST00000524797 PPM1LQ5SGD2 360 aa12.15□□□□□ -0.46
TRAPPC4-204ENST00000524797 L1TD1Q5T7N2 865 aaKnown RBP12.15□□□□□ -0.46
TRAPPC4-204ENST00000524797 SLFN12LQ6IEE8 588 aa12.15□□□□□ -0.46
TRAPPC4-204ENST00000524797 CD302Q8IX05 232 aa12.15□□□□□ -0.46
TRAPPC4-204ENST00000524797 TSPAN18Q96SJ8 248 aa12.15□□□□□ -0.46
TRAPPC4-204ENST00000524797 MRPL44Q9H9J2 332 aaKnown RBP12.15□□□□□ -0.46
TRAPPC4-204ENST00000524797 PCDHB8Q9UN66 801 aa12.15□□□□□ -0.46
TRAPPC4-204ENST00000524797 MUC3AQ02505 3323 aa12.15□□□□□ -0.47
TRAPPC4-204ENST00000524797 H7C4K7 107 aa12.14□□□□□ -0.47
TRAPPC4-204ENST00000524797 XPOTO43592 962 aaKnown RBP12.14□□□□□ -0.47
TRAPPC4-204ENST00000524797 N4BP1O75113 896 aaKnown RBP12.14□□□□□ -0.47
TRAPPC4-204ENST00000524797 IDEP14735 1019 aa12.14□□□□□ -0.47
TRAPPC4-204ENST00000524797 GUCY2FP51841 1108 aa12.14□□□□□ -0.47
TRAPPC4-204ENST00000524797 MTMR3Q13615 1198 aa12.14□□□□□ -0.47
TRAPPC4-204ENST00000524797 MRPL58Q14197 206 aaKnown RBP12.14□□□□□ -0.47
TRAPPC4-204ENST00000524797 FOXD4L6Q3SYB3 417 aaPredicted RBP12.14□□□□□ -0.47
TRAPPC4-204ENST00000524797 AXDND1Q5T1B0 1012 aaPredicted RBP12.14□□□□□ -0.47
TRAPPC4-204ENST00000524797 SHC4Q6S5L8 630 aa12.14□□□□□ -0.47
TRAPPC4-204ENST00000524797 FOXD4L3Q6VB84 417 aaPredicted RBP12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms