RNA–Protein interactions for RNA: ENST00000524095.5

CLVS1-211, Transcript of clavesin 1, humanhuman

TSL 3

Gene CLVS1, Length 709 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLVS1-211ENST00000524095 VPS54Q9P1Q0 977 aa8.15□□□□□ -1.1
CLVS1-211ENST00000524095 PPME1Q9Y570 386 aa8.15□□□□□ -1.1
CLVS1-211ENST00000524095 BACE2Q9Y5Z0 518 aa8.15□□□□□ -1.1
CLVS1-211ENST00000524095 ZFYVE26Q68DK2 2539 aa8.15□□□□□ -1.1
CLVS1-211ENST00000524095 F5P12259 2224 aa8.15□□□□□ -1.1
CLVS1-211ENST00000524095 ANKRD11Q6UB99 2663 aaPredicted RBP8.14□□□□□ -1.11
CLVS1-211ENST00000524095 A0A087WWV3 80 aa8.14□□□□□ -1.11
CLVS1-211ENST00000524095 C4orf47A7E2U8 309 aa8.14□□□□□ -1.11
CLVS1-211ENST00000524095 HEPACAM2A8MVW5 462 aa8.14□□□□□ -1.11
CLVS1-211ENST00000524095 I3L4J1 428 aa8.14□□□□□ -1.11
CLVS1-211ENST00000524095 TAF4O00268 1085 aa8.14□□□□□ -1.11
CLVS1-211ENST00000524095 SLC37A4O43826 429 aa8.14□□□□□ -1.11
CLVS1-211ENST00000524095 SLITRK3O94933 977 aa8.14□□□□□ -1.11
CLVS1-211ENST00000524095 EPN2O95208 641 aa8.14□□□□□ -1.11
CLVS1-211ENST00000524095 THP07101 528 aa8.14□□□□□ -1.11
CLVS1-211ENST00000524095 GJA1P17302 382 aa8.14□□□□□ -1.11
CLVS1-211ENST00000524095 GLRA2P23416 452 aa8.14□□□□□ -1.11
CLVS1-211ENST00000524095 TKTP29401 623 aaKnown RBP8.14□□□□□ -1.11
CLVS1-211ENST00000524095 RCAN1P53805 252 aa8.14□□□□□ -1.11
CLVS1-211ENST00000524095 ELAVL2Q12926 359 aaKnown RBP8.14□□□□□ -1.11
CLVS1-211ENST00000524095 FOXC1Q12948 553 aa8.14□□□□□ -1.11
CLVS1-211ENST00000524095 CAPSQ13938 189 aa8.14□□□□□ -1.11
CLVS1-211ENST00000524095 EPHA7Q15375 998 aa8.14□□□□□ -1.11
CLVS1-211ENST00000524095 TSGA10IPQ3SY00 556 aa8.14□□□□□ -1.11
CLVS1-211ENST00000524095 XKR9Q5GH70 373 aa8.14□□□□□ -1.11
CLVS1-211ENST00000524095 TCEAL6Q6IPX3 200 aa8.14□□□□□ -1.11
CLVS1-211ENST00000524095 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.14□□□□□ -1.11
CLVS1-211ENST00000524095 OTUD6AQ7L8S5 288 aa8.14□□□□□ -1.11
CLVS1-211ENST00000524095 HACE1Q8IYU2 909 aa8.14□□□□□ -1.11
CLVS1-211ENST00000524095 TTC8Q8TAM2 541 aa8.14□□□□□ -1.11
CLVS1-211ENST00000524095 GAB3Q8WWW8 586 aa8.14□□□□□ -1.11
CLVS1-211ENST00000524095 TCEAL3Q969E4 200 aa8.14□□□□□ -1.11
CLVS1-211ENST00000524095 ESYT1Q9BSJ8 1104 aa8.14□□□□□ -1.11
CLVS1-211ENST00000524095 NFKBIZQ9BYH8 718 aa8.14□□□□□ -1.11
CLVS1-211ENST00000524095 POLR3BQ9NW08 1133 aaPredicted RBP8.14□□□□□ -1.11
CLVS1-211ENST00000524095 USP20Q9Y2K6 914 aa8.14□□□□□ -1.11
CLVS1-211ENST00000524095 LAMA1P25391 3075 aa8.14□□□□□ -1.11
CLVS1-211ENST00000524095 CEP295Q9C0D2 2601 aa8.14□□□□□ -1.11
CLVS1-211ENST00000524095 PKD1L2Q7Z442 2459 aa8.13□□□□□ -1.11
CLVS1-211ENST00000524095 CCDC196A0A1B0GTZ2 297 aa8.13□□□□□ -1.11
CLVS1-211ENST00000524095 MYBPHLA2RUH7 354 aa8.13□□□□□ -1.11
CLVS1-211ENST00000524095 ZNF197O14709 1029 aa8.13□□□□□ -1.11
CLVS1-211ENST00000524095 RPP40O75818 363 aaKnown RBP8.13□□□□□ -1.11
CLVS1-211ENST00000524095 B3GAT3O94766 335 aa8.13□□□□□ -1.11
CLVS1-211ENST00000524095 CPA1P15085 419 aa8.13□□□□□ -1.11
CLVS1-211ENST00000524095 ATF2P15336 505 aa8.13□□□□□ -1.11
CLVS1-211ENST00000524095 BRCC3P46736 316 aa8.13□□□□□ -1.11
CLVS1-211ENST00000524095 NOVA1P51513 510 aaKnown RBP8.13□□□□□ -1.11
CLVS1-211ENST00000524095 CLCNKBP51801 687 aa8.13□□□□□ -1.11
CLVS1-211ENST00000524095 KPNA1P52294 538 aaPredicted RBP8.13□□□□□ -1.11
CLVS1-211ENST00000524095 NLRP5P59047 1200 aa8.13□□□□□ -1.11
CLVS1-211ENST00000524095 CCINQ13939 588 aa8.13□□□□□ -1.11
CLVS1-211ENST00000524095 MRPL58Q14197 206 aaKnown RBP8.13□□□□□ -1.11
CLVS1-211ENST00000524095 CTTNQ14247 550 aaKnown RBP8.13□□□□□ -1.11
CLVS1-211ENST00000524095 NPY5RQ15761 445 aa8.13□□□□□ -1.11
CLVS1-211ENST00000524095 UPP1Q16831 310 aa8.13□□□□□ -1.11
CLVS1-211ENST00000524095 DGKKQ5KSL6 1271 aa8.13□□□□□ -1.11
CLVS1-211ENST00000524095 RNF43Q68DV7 783 aa8.13□□□□□ -1.11
CLVS1-211ENST00000524095 SLC8B1Q6J4K2 584 aa8.13□□□□□ -1.11
CLVS1-211ENST00000524095 PKN3Q6P5Z2 889 aa8.13□□□□□ -1.11
CLVS1-211ENST00000524095 TMEM92Q6UXU6 159 aa8.13□□□□□ -1.11
CLVS1-211ENST00000524095 NOSTRINQ8IVI9 506 aa8.13□□□□□ -1.11
CLVS1-211ENST00000524095 TCEAL8Q8IYN2 117 aa8.13□□□□□ -1.11
CLVS1-211ENST00000524095 ZSCAN18Q8TBC5 510 aaPredicted RBP8.13□□□□□ -1.11
CLVS1-211ENST00000524095 DEPDC1BQ8WUY9 529 aa8.13□□□□□ -1.11
CLVS1-211ENST00000524095 HAS1Q92839 578 aa8.13□□□□□ -1.11
CLVS1-211ENST00000524095 DDX27Q96GQ7 796 aaKnown RBP8.13□□□□□ -1.11
CLVS1-211ENST00000524095 DYDC2Q96IM9 177 aa8.13□□□□□ -1.11
CLVS1-211ENST00000524095 ZC3H10Q96K80 434 aaKnown RBP8.13□□□□□ -1.11
CLVS1-211ENST00000524095 FAM20AQ96MK3 541 aa8.13□□□□□ -1.11
CLVS1-211ENST00000524095 MTRQ99707 1265 aa8.13□□□□□ -1.11
CLVS1-211ENST00000524095 SCNM1Q9BWG6 230 aa8.13□□□□□ -1.11
CLVS1-211ENST00000524095 SLKQ9H2G2 1235 aaPredicted RBP8.13□□□□□ -1.11
CLVS1-211ENST00000524095 FZD8Q9H461 694 aa8.13□□□□□ -1.11
CLVS1-211ENST00000524095 C8orf33Q9H7E9 229 aaPredicted RBP8.13□□□□□ -1.11
CLVS1-211ENST00000524095 KCNMB3Q9NPA1 279 aa8.13□□□□□ -1.11
CLVS1-211ENST00000524095 SH3GLB2Q9NR46 395 aa8.13□□□□□ -1.11
CLVS1-211ENST00000524095 CEP72Q9P209 647 aa8.13□□□□□ -1.11
CLVS1-211ENST00000524095 DDX25Q9UHL0 483 aaKnown RBP8.13□□□□□ -1.11
CLVS1-211ENST00000524095 NAP1L2Q9ULW6 460 aaPredicted RBP8.13□□□□□ -1.11
CLVS1-211ENST00000524095 PCDHA4Q9UN74 947 aa8.13□□□□□ -1.11
CLVS1-211ENST00000524095 LHX6Q9UPM6 363 aa8.13□□□□□ -1.11
CLVS1-211ENST00000524095 NOTCH4Q99466 2003 aa8.12□□□□□ -1.11
CLVS1-211ENST00000524095 NBEAQ8NFP9 2946 aa8.12□□□□□ -1.11
CLVS1-211ENST00000524095 TMEM8BA6NDV4 472 aa8.12□□□□□ -1.11
CLVS1-211ENST00000524095 SLC38A8A6NNN8 435 aa8.12□□□□□ -1.11
CLVS1-211ENST00000524095 SPECC1L-ADORA2AF8WAN1 911 aa8.12□□□□□ -1.11
CLVS1-211ENST00000524095 PRRG1O14668 218 aa8.12□□□□□ -1.11
CLVS1-211ENST00000524095 TBX3O15119 743 aa8.12□□□□□ -1.11
CLVS1-211ENST00000524095 CHADO15335 359 aa8.12□□□□□ -1.11
CLVS1-211ENST00000524095 DKC1O60832 514 aaKnown RBP eCLIP8.12□□□□□ -1.11
CLVS1-211ENST00000524095 RECQL4O94761 1208 aa8.12□□□□□ -1.11
CLVS1-211ENST00000524095 ZIC2O95409 532 aaPredicted RBP8.12□□□□□ -1.11
CLVS1-211ENST00000524095 LRG1P02750 347 aa8.12□□□□□ -1.11
CLVS1-211ENST00000524095 CAPNS1P04632 268 aa8.12□□□□□ -1.11
CLVS1-211ENST00000524095 ELF1P32519 619 aa8.12□□□□□ -1.11
CLVS1-211ENST00000524095 EPHA5P54756 1037 aa8.12□□□□□ -1.11
CLVS1-211ENST00000524095 ARPP19P56211 112 aa8.12□□□□□ -1.11
CLVS1-211ENST00000524095 LSM11P83369 360 aaKnown RBP eCLIP8.12□□□□□ -1.11
CLVS1-211ENST00000524095 ROR1Q01973 937 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms