RNA–Protein interactions for RNA: ENST00000523541.1

CCNC-213, Transcript of cyclin C, humanhuman

TSL 1 (best)

Gene CCNC, Length 1,123 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNC-213ENST00000523541 ZBTB6Q15916 424 aa18.79■□□□□ 0.6
CCNC-213ENST00000523541 PTPN21Q16825 1174 aa18.79■□□□□ 0.6
CCNC-213ENST00000523541 PRSS55Q6UWB4 352 aaPredicted RBP18.79■□□□□ 0.6
CCNC-213ENST00000523541 CD300LGQ6UXG3 332 aa18.79■□□□□ 0.6
CCNC-213ENST00000523541 TRIM67Q6ZTA4 783 aa18.79■□□□□ 0.6
CCNC-213ENST00000523541 HFE2Q6ZVN8 426 aa18.79■□□□□ 0.6
CCNC-213ENST00000523541 KREMEN2Q8NCW0 462 aa18.79■□□□□ 0.6
CCNC-213ENST00000523541 STAMQ92783 540 aa18.79■□□□□ 0.6
CCNC-213ENST00000523541 PBXIP1Q96AQ6 731 aa18.79■□□□□ 0.6
CCNC-213ENST00000523541 PYM1Q9BRP8 204 aaKnown RBP18.79■□□□□ 0.6
CCNC-213ENST00000523541 HAPLN2Q9GZV7 340 aa18.79■□□□□ 0.6
CCNC-213ENST00000523541 MRPL44Q9H9J2 332 aaKnown RBP18.79■□□□□ 0.6
CCNC-213ENST00000523541 RPF1Q9H9Y2 349 aaKnown RBP18.79■□□□□ 0.6
CCNC-213ENST00000523541 MAGEF1Q9HAY2 307 aa18.79■□□□□ 0.6
CCNC-213ENST00000523541 UBQLN1Q9UMX0 589 aaKnown RBP18.79■□□□□ 0.6
CCNC-213ENST00000523541 DERAQ9Y315 318 aa18.79■□□□□ 0.6
CCNC-213ENST00000523541 ARIH1Q9Y4X5 557 aaPredicted RBP18.79■□□□□ 0.6
CCNC-213ENST00000523541 MYH11P35749 1972 aa18.79■□□□□ 0.6
CCNC-213ENST00000523541 FAM189A1O60320 539 aa18.78■□□□□ 0.6
CCNC-213ENST00000523541 PPP1R37O75864 691 aa18.78■□□□□ 0.6
CCNC-213ENST00000523541 LRPAP1P30533 357 aa18.78■□□□□ 0.6
CCNC-213ENST00000523541 SOX4Q06945 474 aaPredicted RBP18.78■□□□□ 0.6
CCNC-213ENST00000523541 CNNM4Q6P4Q7 775 aa18.78■□□□□ 0.6
CCNC-213ENST00000523541 OTOP3Q7RTS5 596 aa18.78■□□□□ 0.6
CCNC-213ENST00000523541 SUGP1Q8IWZ8 645 aaKnown RBP18.78■□□□□ 0.6
CCNC-213ENST00000523541 CCDC65Q8IXS2 484 aa18.78■□□□□ 0.6
CCNC-213ENST00000523541 MSTO1Q9BUK6 570 aa18.78■□□□□ 0.6
CCNC-213ENST00000523541 OXCT2Q9BYC2 517 aaPredicted RBP18.78■□□□□ 0.6
CCNC-213ENST00000523541 PANK2Q9BZ23 570 aa18.78■□□□□ 0.6
CCNC-213ENST00000523541 ASB7Q9H672 318 aa18.78■□□□□ 0.6
CCNC-213ENST00000523541 KBTBD4Q9NVX7 518 aa18.78■□□□□ 0.6
CCNC-213ENST00000523541 MTRRQ9UBK8 725 aa18.78■□□□□ 0.6
CCNC-213ENST00000523541 CPSF3Q9UKF6 684 aaKnown RBP18.78■□□□□ 0.6
CCNC-213ENST00000523541 RCOR1Q9UKL0 485 aa18.78■□□□□ 0.6
CCNC-213ENST00000523541 NUB1Q9Y5A7 615 aa18.78■□□□□ 0.6
CCNC-213ENST00000523541 H7C4K7 107 aa18.77■□□□□ 0.6
CCNC-213ENST00000523541 MEFVO15553 781 aaPredicted RBP18.77■□□□□ 0.6
CCNC-213ENST00000523541 POU2F2P09086 479 aa18.77■□□□□ 0.6
CCNC-213ENST00000523541 HNRNPA1P09651 372 aaKnown RBP eCLIP18.77■□□□□ 0.6
CCNC-213ENST00000523541 CXCL8P10145 99 aa18.77■□□□□ 0.6
CCNC-213ENST00000523541 HOXA9P31269 272 aa18.77■□□□□ 0.6
CCNC-213ENST00000523541 STXBP4Q6ZWJ1 553 aa18.77■□□□□ 0.6
CCNC-213ENST00000523541 SFR1Q86XK3 245 aa18.77■□□□□ 0.6
CCNC-213ENST00000523541 APPL2Q8NEU8 664 aa18.77■□□□□ 0.6
CCNC-213ENST00000523541 ACCSQ96QU6 501 aa18.77■□□□□ 0.6
CCNC-213ENST00000523541 PRKD2Q9BZL6 878 aa18.77■□□□□ 0.6
CCNC-213ENST00000523541 TMEM206Q9H813 350 aa18.77■□□□□ 0.6
CCNC-213ENST00000523541 GOLGA2P5Q9HBQ8 144 aa18.77■□□□□ 0.6
CCNC-213ENST00000523541 WDR6Q9NNW5 1121 aaKnown RBP18.77■□□□□ 0.6
CCNC-213ENST00000523541 LIMD1Q9UGP4 676 aa18.77■□□□□ 0.6
CCNC-213ENST00000523541 MAFFQ9ULX9 164 aa18.77■□□□□ 0.6
CCNC-213ENST00000523541 TRIOO75962 3097 aa18.76■□□□□ 0.59
CCNC-213ENST00000523541 A0A087X0B3 334 aa18.76■□□□□ 0.59
CCNC-213ENST00000523541 LACTBL1A8MY62 500 aa18.76■□□□□ 0.59
CCNC-213ENST00000523541 RFPL2O75678 378 aa18.76■□□□□ 0.59
CCNC-213ENST00000523541 ZMYND10O75800 440 aa18.76■□□□□ 0.59
CCNC-213ENST00000523541 LDHAP00338 332 aaKnown RBP18.76■□□□□ 0.59
CCNC-213ENST00000523541 SIGLEC14Q08ET2 396 aa18.76■□□□□ 0.59
CCNC-213ENST00000523541 MTMR3Q13615 1198 aa18.76■□□□□ 0.59
CCNC-213ENST00000523541 ENOX2Q16206 610 aaKnown RBP18.76■□□□□ 0.59
CCNC-213ENST00000523541 E2F4Q16254 413 aa18.76■□□□□ 0.59
CCNC-213ENST00000523541 SEZ6Q53EL9 994 aa18.76■□□□□ 0.59
CCNC-213ENST00000523541 ZC2HC1CQ53FD0 456 aaPredicted RBP18.76■□□□□ 0.59
CCNC-213ENST00000523541 AXDND1Q5T1B0 1012 aaPredicted RBP18.76■□□□□ 0.59
CCNC-213ENST00000523541 L1TD1Q5T7N2 865 aaKnown RBP18.76■□□□□ 0.59
CCNC-213ENST00000523541 LIN9Q5TKA1 542 aa18.76■□□□□ 0.59
CCNC-213ENST00000523541 ADALQ6DHV7 355 aa18.76■□□□□ 0.59
CCNC-213ENST00000523541 SLC8B1Q6J4K2 584 aa18.76■□□□□ 0.59
CCNC-213ENST00000523541 SLC39A4Q6P5W5 647 aa18.76■□□□□ 0.59
CCNC-213ENST00000523541 BMP8AQ7Z5Y6 402 aa18.76■□□□□ 0.59
CCNC-213ENST00000523541 UBALD2Q8IYN6 164 aa18.76■□□□□ 0.59
CCNC-213ENST00000523541 PDILTQ8N807 584 aa18.76■□□□□ 0.59
CCNC-213ENST00000523541 C3orf58Q8NDZ4 430 aa18.76■□□□□ 0.59
CCNC-213ENST00000523541 SMG7Q92540 1137 aaKnown RBP18.76■□□□□ 0.59
CCNC-213ENST00000523541 C18orf25Q96B23 403 aaPredicted RBP18.76■□□□□ 0.59
CCNC-213ENST00000523541 SUSD3Q96L08 255 aa18.76■□□□□ 0.59
CCNC-213ENST00000523541 PANK4Q9NVE7 773 aa18.76■□□□□ 0.59
CCNC-213ENST00000523541 FAM13BQ9NYF5 915 aa18.76■□□□□ 0.59
CCNC-213ENST00000523541 FBXW11Q9UKB1 542 aa18.76■□□□□ 0.59
CCNC-213ENST00000523541 AGO2Q9UKV8 859 aaKnown RBP18.76■□□□□ 0.59
CCNC-213ENST00000523541 SORCS3Q9UPU3 1222 aa18.76■□□□□ 0.59
CCNC-213ENST00000523541 PLXNA3P51805 1871 aa18.75■□□□□ 0.59
CCNC-213ENST00000523541 ASGR2P07307 311 aa18.75■□□□□ 0.59
CCNC-213ENST00000523541 IDEP14735 1019 aa18.75■□□□□ 0.59
CCNC-213ENST00000523541 GBP2P32456 591 aaPredicted RBP18.75■□□□□ 0.59
CCNC-213ENST00000523541 OR1D2P34982 312 aa18.75■□□□□ 0.59
CCNC-213ENST00000523541 PLA2G5P39877 138 aa18.75■□□□□ 0.59
CCNC-213ENST00000523541 ME1P48163 572 aa18.75■□□□□ 0.59
CCNC-213ENST00000523541 MRPL58Q14197 206 aaKnown RBP18.75■□□□□ 0.59
CCNC-213ENST00000523541 SHC4Q6S5L8 630 aa18.75■□□□□ 0.59
CCNC-213ENST00000523541 NT5DC4Q86YG4 428 aa18.75■□□□□ 0.59
CCNC-213ENST00000523541 BEST2Q8NFU1 509 aa18.75■□□□□ 0.59
CCNC-213ENST00000523541 KIF12Q96FN5 646 aa18.75■□□□□ 0.59
CCNC-213ENST00000523541 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP18.75■□□□□ 0.59
CCNC-213ENST00000523541 C2CD2Q9Y426 696 aa18.75■□□□□ 0.59
CCNC-213ENST00000523541 ATP6V1DQ9Y5K8 247 aa18.75■□□□□ 0.59
CCNC-213ENST00000523541 ARHGEF37A1IGU5 675 aa18.74■□□□□ 0.59
CCNC-213ENST00000523541 ANKRD63C9JTQ0 380 aa18.74■□□□□ 0.59
CCNC-213ENST00000523541 KIAA0391O15091 583 aaKnown RBP18.74■□□□□ 0.59
CCNC-213ENST00000523541 GCNT3O95395 438 aa18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms