RNA–Protein interactions for RNA: ENST00000522792.1

CTNNA1-236, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 2,044 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-236ENST00000522792 ZNF710Q8N1W2 664 aa16.62■□□□□ 0.25
CTNNA1-236ENST00000522792 CXCL16Q9H2A7 254 aa16.62■□□□□ 0.25
CTNNA1-236ENST00000522792 NXF3Q9H4D5 531 aaKnown RBP16.62■□□□□ 0.25
CTNNA1-236ENST00000522792 ACP6Q9NPH0 428 aa16.62■□□□□ 0.25
CTNNA1-236ENST00000522792 PTPN22Q9Y2R2 807 aa16.62■□□□□ 0.25
CTNNA1-236ENST00000522792 BRCA2P51587 3418 aa16.62■□□□□ 0.25
CTNNA1-236ENST00000522792 A0A1W2PQ45 241 aaPredicted RBP16.62■□□□□ 0.25
CTNNA1-236ENST00000522792 A0A1W2PQY0 241 aa16.62■□□□□ 0.25
CTNNA1-236ENST00000522792 FAM170AA1A519 330 aa16.62■□□□□ 0.25
CTNNA1-236ENST00000522792 CYP26A1O43174 497 aa16.62■□□□□ 0.25
CTNNA1-236ENST00000522792 KRT19P08727 400 aa16.62■□□□□ 0.25
CTNNA1-236ENST00000522792 CCDC172P0C7W6 258 aa16.62■□□□□ 0.25
CTNNA1-236ENST00000522792 KRT5P13647 590 aa16.62■□□□□ 0.25
CTNNA1-236ENST00000522792 GCNT1Q02742 428 aa16.62■□□□□ 0.25
CTNNA1-236ENST00000522792 DNAAF5Q86Y56 855 aa16.62■□□□□ 0.25
CTNNA1-236ENST00000522792 FMNL3Q8IVF7 1028 aa16.62■□□□□ 0.25
CTNNA1-236ENST00000522792 FAM71AQ8IYT1 594 aa16.62■□□□□ 0.25
CTNNA1-236ENST00000522792 LNX1Q8TBB1 728 aaPredicted RBP16.62■□□□□ 0.25
CTNNA1-236ENST00000522792 SLC20A1Q8WUM9 679 aa16.62■□□□□ 0.25
CTNNA1-236ENST00000522792 WDR24Q96S15 920 aa16.62■□□□□ 0.25
CTNNA1-236ENST00000522792 IMPG2Q9BZV3 1241 aa16.62■□□□□ 0.25
CTNNA1-236ENST00000522792 SENP6Q9GZR1 1112 aaPredicted RBP16.62■□□□□ 0.25
CTNNA1-236ENST00000522792 DUSP10Q9Y6W6 482 aa16.62■□□□□ 0.25
CTNNA1-236ENST00000522792 DDX3XO00571 662 aaKnown RBP eCLIP16.61■□□□□ 0.25
CTNNA1-236ENST00000522792 FANCGO15287 622 aa16.61■□□□□ 0.25
CTNNA1-236ENST00000522792 KIF5CO60282 957 aa16.61■□□□□ 0.25
CTNNA1-236ENST00000522792 RPS6KA5O75582 802 aa16.61■□□□□ 0.25
CTNNA1-236ENST00000522792 SGPL1O95470 568 aa16.61■□□□□ 0.25
CTNNA1-236ENST00000522792 GUCY2FP51841 1108 aa16.61■□□□□ 0.25
CTNNA1-236ENST00000522792 MGAT3Q09327 533 aa16.61■□□□□ 0.25
CTNNA1-236ENST00000522792 CUL2Q13617 745 aa16.61■□□□□ 0.25
CTNNA1-236ENST00000522792 UBXN11Q5T124 520 aa16.61■□□□□ 0.25
CTNNA1-236ENST00000522792 VPS36Q86VN1 386 aa16.61■□□□□ 0.25
CTNNA1-236ENST00000522792 GLYCTKQ8IVS8 523 aa16.61■□□□□ 0.25
CTNNA1-236ENST00000522792 OLIG1Q8TAK6 271 aa16.61■□□□□ 0.25
CTNNA1-236ENST00000522792 TSEN34Q9BSV6 310 aaKnown RBP16.61■□□□□ 0.25
CTNNA1-236ENST00000522792 OSBPL7Q9BZF2 842 aa16.61■□□□□ 0.25
CTNNA1-236ENST00000522792 ASB7Q9H672 318 aa16.61■□□□□ 0.25
CTNNA1-236ENST00000522792 SEPT11Q9NVA2 429 aaKnown RBP16.61■□□□□ 0.25
CTNNA1-236ENST00000522792 ASS1P00966 412 aaKnown RBP16.6■□□□□ 0.25
CTNNA1-236ENST00000522792 CALCAP01258 141 aa16.6■□□□□ 0.25
CTNNA1-236ENST00000522792 AKAP5P24588 427 aa16.6■□□□□ 0.25
CTNNA1-236ENST00000522792 KIF5AQ12840 1032 aa16.6■□□□□ 0.25
CTNNA1-236ENST00000522792 NFX1Q12986 1120 aaKnown RBP16.6■□□□□ 0.25
CTNNA1-236ENST00000522792 TMEM132DQ14C87 1099 aa16.6■□□□□ 0.25
CTNNA1-236ENST00000522792 MTFR1Q15390 333 aa16.6■□□□□ 0.25
CTNNA1-236ENST00000522792 ZNF569Q5MCW4 686 aa16.6■□□□□ 0.25
CTNNA1-236ENST00000522792 ENOSF1Q7L5Y1 443 aa16.6■□□□□ 0.25
CTNNA1-236ENST00000522792 SLC47A2Q86VL8 602 aa16.6■□□□□ 0.25
CTNNA1-236ENST00000522792 C1orf127Q8N9H9 656 aa16.6■□□□□ 0.25
CTNNA1-236ENST00000522792 ARRDC4Q8NCT1 418 aa16.6■□□□□ 0.25
CTNNA1-236ENST00000522792 KIF18AQ8NI77 898 aa16.6■□□□□ 0.25
CTNNA1-236ENST00000522792 U2AF1L4Q8WU68 220 aaKnown RBP16.6■□□□□ 0.25
CTNNA1-236ENST00000522792 PACSIN1Q9BY11 444 aa16.6■□□□□ 0.25
CTNNA1-236ENST00000522792 STARD7Q9NQZ5 370 aa16.6■□□□□ 0.25
CTNNA1-236ENST00000522792 RNF19AQ9NV58 838 aa16.6■□□□□ 0.25
CTNNA1-236ENST00000522792 WBP1LQ9NX94 342 aa16.6■□□□□ 0.25
CTNNA1-236ENST00000522792 ST3GAL5Q9UNP4 418 aa16.6■□□□□ 0.25
CTNNA1-236ENST00000522792 PAXBP1Q9Y5B6 917 aa16.6■□□□□ 0.25
CTNNA1-236ENST00000522792 MACROD2A1Z1Q3 448 aa16.6■□□□□ 0.25
CTNNA1-236ENST00000522792 KRT86O43790 486 aa16.6■□□□□ 0.25
CTNNA1-236ENST00000522792 ITGB3P05106 788 aa16.6■□□□□ 0.25
CTNNA1-236ENST00000522792 YARSP54577 528 aaKnown RBP16.6■□□□□ 0.25
CTNNA1-236ENST00000522792 POU5F1Q01860 360 aaKnown RBP16.6■□□□□ 0.25
CTNNA1-236ENST00000522792 ZNF699Q32M78 642 aa16.6■□□□□ 0.25
CTNNA1-236ENST00000522792 TAF3Q5VWG9 929 aa16.6■□□□□ 0.25
CTNNA1-236ENST00000522792 TWF2Q6IBS0 349 aaKnown RBP16.6■□□□□ 0.25
CTNNA1-236ENST00000522792 RPAINQ86UA6 219 aa16.6■□□□□ 0.25
CTNNA1-236ENST00000522792 KIF12Q96FN5 646 aa16.6■□□□□ 0.25
CTNNA1-236ENST00000522792 SNX27Q96L92 541 aa16.6■□□□□ 0.25
CTNNA1-236ENST00000522792 SYT11Q9BT88 431 aa16.6■□□□□ 0.25
CTNNA1-236ENST00000522792 TRPV6Q9H1D0 765 aa16.6■□□□□ 0.25
CTNNA1-236ENST00000522792 SIX4Q9UIU6 781 aa16.6■□□□□ 0.25
CTNNA1-236ENST00000522792 NAGPAQ9UK23 515 aa16.6■□□□□ 0.25
CTNNA1-236ENST00000522792 RECQL4O94761 1208 aa16.59■□□□□ 0.25
CTNNA1-236ENST00000522792 TNFAIP3P21580 790 aa16.59■□□□□ 0.25
CTNNA1-236ENST00000522792 PTPN11Q06124 597 aaPredicted RBP16.59■□□□□ 0.25
CTNNA1-236ENST00000522792 PTK7Q13308 1070 aa16.59■□□□□ 0.25
CTNNA1-236ENST00000522792 BMS1Q14692 1282 aaKnown RBP16.59■□□□□ 0.25
CTNNA1-236ENST00000522792 SGSM1Q2NKQ1 1148 aa16.59■□□□□ 0.25
CTNNA1-236ENST00000522792 ALKBH5Q6P6C2 394 aaKnown RBP16.59■□□□□ 0.25
CTNNA1-236ENST00000522792 SCARA5Q6ZMJ2 495 aa16.59■□□□□ 0.25
CTNNA1-236ENST00000522792 ZNF662Q6ZS27 426 aa16.59■□□□□ 0.25
CTNNA1-236ENST00000522792 NOP9Q86U38 636 aaKnown RBP16.59■□□□□ 0.25
CTNNA1-236ENST00000522792 SLC35F6Q8N357 371 aa16.59■□□□□ 0.25
CTNNA1-236ENST00000522792 EPS8L1Q8TE68 723 aa16.59■□□□□ 0.25
CTNNA1-236ENST00000522792 FAM81BQ96LP2 452 aa16.59■□□□□ 0.25
CTNNA1-236ENST00000522792 AGPAT1Q99943 283 aa16.59■□□□□ 0.25
CTNNA1-236ENST00000522792 KLK14Q9P0G3 267 aa16.59■□□□□ 0.25
CTNNA1-236ENST00000522792 TMCO5BA8MYB1 307 aa16.58■□□□□ 0.25
CTNNA1-236ENST00000522792 KBTBD13C9JR72 458 aa16.58■□□□□ 0.25
CTNNA1-236ENST00000522792 TUBB4AP04350 444 aa16.58■□□□□ 0.25
CTNNA1-236ENST00000522792 GHRP10912 638 aa16.58■□□□□ 0.25
CTNNA1-236ENST00000522792 ANXA13P27216 316 aa16.58■□□□□ 0.25
CTNNA1-236ENST00000522792 GLRA4Q5JXX5 417 aa16.58■□□□□ 0.25
CTNNA1-236ENST00000522792 PALB2Q86YC2 1186 aa16.58■□□□□ 0.25
CTNNA1-236ENST00000522792 RPUSD2Q8IZ73 545 aaKnown RBP16.58■□□□□ 0.25
CTNNA1-236ENST00000522792 SLC30A5Q8TAD4 765 aa16.58■□□□□ 0.25
CTNNA1-236ENST00000522792 ZMAT2Q96NC0 199 aaKnown RBP16.58■□□□□ 0.25
CTNNA1-236ENST00000522792 DEFB118Q96PH6 123 aa16.58■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms