RNA–Protein interactions for RNA: ENST00000522501.1

CDKL3-208, Transcript of cyclin dependent kinase like 3, humanhuman

TSL 3

Gene CDKL3, Length 432 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL3-208ENST00000522501 THSD4Q6ZMP0 1018 aa9.53□□□□□ -0.88
CDKL3-208ENST00000522501 CCDC73Q6ZRK6 1079 aa9.53□□□□□ -0.88
CDKL3-208ENST00000522501 RBM43Q6ZSC3 357 aaKnown RBP9.53□□□□□ -0.88
CDKL3-208ENST00000522501 ANO5Q75V66 913 aa9.53□□□□□ -0.88
CDKL3-208ENST00000522501 SRGAP1Q7Z6B7 1085 aa9.53□□□□□ -0.88
CDKL3-208ENST00000522501 GLYCTKQ8IVS8 523 aa9.53□□□□□ -0.88
CDKL3-208ENST00000522501 CNNM3Q8NE01 707 aa9.53□□□□□ -0.88
CDKL3-208ENST00000522501 CCDC148Q8NFR7 591 aa9.53□□□□□ -0.88
CDKL3-208ENST00000522501 CLDN23Q96B33 292 aa9.53□□□□□ -0.88
CDKL3-208ENST00000522501 B3GALT6Q96L58 329 aa9.53□□□□□ -0.88
CDKL3-208ENST00000522501 GMEB2Q9UKD1 530 aa9.53□□□□□ -0.88
CDKL3-208ENST00000522501 NAP1L2Q9ULW6 460 aaPredicted RBP9.53□□□□□ -0.88
CDKL3-208ENST00000522501 IPPQ9Y573 584 aa9.53□□□□□ -0.88
CDKL3-208ENST00000522501 ASPMQ8IZT6 3477 aa9.53□□□□□ -0.88
CDKL3-208ENST00000522501 WDFY3Q8IZQ1 3526 aa9.52□□□□□ -0.88
CDKL3-208ENST00000522501 FAM170BA6NMN3 283 aa9.52□□□□□ -0.89
CDKL3-208ENST00000522501 GAS2O43903 313 aaKnown RBP9.52□□□□□ -0.89
CDKL3-208ENST00000522501 ADCY5O95622 1261 aa9.52□□□□□ -0.89
CDKL3-208ENST00000522501 POU2F2P09086 479 aa9.52□□□□□ -0.89
CDKL3-208ENST00000522501 HNRNPA1P09651 372 aaKnown RBP eCLIP9.52□□□□□ -0.89
CDKL3-208ENST00000522501 ITGA4P13612 1032 aa9.52□□□□□ -0.89
CDKL3-208ENST00000522501 RPL17P18621 184 aaKnown RBP9.52□□□□□ -0.89
CDKL3-208ENST00000522501 LIG1P18858 919 aa9.52□□□□□ -0.89
CDKL3-208ENST00000522501 NTHL1P78549 312 aa9.52□□□□□ -0.89
CDKL3-208ENST00000522501 USP41Q3LFD5 358 aa9.52□□□□□ -0.89
CDKL3-208ENST00000522501 Q4G0T1 1027 aa9.52□□□□□ -0.89
CDKL3-208ENST00000522501 SLC44A4Q53GD3 710 aa9.52□□□□□ -0.89
CDKL3-208ENST00000522501 PPM1JQ5JR12 505 aa9.52□□□□□ -0.89
CDKL3-208ENST00000522501 CPLX2Q6PUV4 134 aaKnown RBP9.52□□□□□ -0.89
CDKL3-208ENST00000522501 TPRG1Q6ZUI0 275 aa9.52□□□□□ -0.89
CDKL3-208ENST00000522501 GRASPQ7Z6J2 395 aaPredicted RBP9.52□□□□□ -0.89
CDKL3-208ENST00000522501 NETO1Q8TDF5 533 aa9.52□□□□□ -0.89
CDKL3-208ENST00000522501 PSPC1Q8WXF1 523 aaKnown RBP9.52□□□□□ -0.89
CDKL3-208ENST00000522501 SLC7A3Q8WY07 619 aa9.52□□□□□ -0.89
CDKL3-208ENST00000522501 FGF13Q92913 245 aa9.52□□□□□ -0.89
CDKL3-208ENST00000522501 CCDC51Q96ER9 411 aa9.52□□□□□ -0.89
CDKL3-208ENST00000522501 ZFP42Q96MM3 310 aa9.52□□□□□ -0.89
CDKL3-208ENST00000522501 GAD1Q99259 594 aa9.52□□□□□ -0.89
CDKL3-208ENST00000522501 KXD1Q9BQD3 176 aa9.52□□□□□ -0.89
CDKL3-208ENST00000522501 PHF20Q9BVI0 1012 aa9.52□□□□□ -0.89
CDKL3-208ENST00000522501 EIF2AQ9BY44 585 aaKnown RBP9.52□□□□□ -0.89
CDKL3-208ENST00000522501 FAM126AQ9BYI3 521 aaPredicted RBP9.52□□□□□ -0.89
CDKL3-208ENST00000522501 GPR62Q9BZJ7 368 aa9.52□□□□□ -0.89
CDKL3-208ENST00000522501 DHX33Q9H6R0 707 aaKnown RBP9.52□□□□□ -0.89
CDKL3-208ENST00000522501 ADAM28Q9UKQ2 775 aa9.52□□□□□ -0.89
CDKL3-208ENST00000522501 SF3B1O75533 1304 aaKnown RBP eCLIP9.52□□□□□ -0.89
CDKL3-208ENST00000522501 MYO16Q9Y6X6 1858 aa9.51□□□□□ -0.89
CDKL3-208ENST00000522501 SHISA7A6NL88 538 aa9.51□□□□□ -0.89
CDKL3-208ENST00000522501 CPLX1O14810 134 aa9.51□□□□□ -0.89
CDKL3-208ENST00000522501 SLC30A4O14863 429 aa9.51□□□□□ -0.89
CDKL3-208ENST00000522501 TSPAN1O60635 241 aa9.51□□□□□ -0.89
CDKL3-208ENST00000522501 LRP3O75074 770 aa9.51□□□□□ -0.89
CDKL3-208ENST00000522501 NR1I2O75469 434 aa9.51□□□□□ -0.89
CDKL3-208ENST00000522501 C8AP07357 584 aa9.51□□□□□ -0.89
CDKL3-208ENST00000522501 CD72P21854 359 aa9.51□□□□□ -0.89
CDKL3-208ENST00000522501 ADD1P35611 737 aaKnown RBP9.51□□□□□ -0.89
CDKL3-208ENST00000522501 USP11P51784 963 aa9.51□□□□□ -0.89
CDKL3-208ENST00000522501 LAMTOR4Q0VGL1 99 aa9.51□□□□□ -0.89
CDKL3-208ENST00000522501 RTP2Q5QGT7 225 aa9.51□□□□□ -0.89
CDKL3-208ENST00000522501 ZBTB41Q5SVQ8 909 aa9.51□□□□□ -0.89
CDKL3-208ENST00000522501 LIN9Q5TKA1 542 aa9.51□□□□□ -0.89
CDKL3-208ENST00000522501 NOTUMQ6P988 496 aa9.51□□□□□ -0.89
CDKL3-208ENST00000522501 TSSK4Q6SA08 328 aa9.51□□□□□ -0.89
CDKL3-208ENST00000522501 BRAPQ7Z569 592 aa9.51□□□□□ -0.89
CDKL3-208ENST00000522501 NPAS3Q8IXF0 933 aa9.51□□□□□ -0.89
CDKL3-208ENST00000522501 ETNPPLQ8TBG4 499 aa9.51□□□□□ -0.89
CDKL3-208ENST00000522501 COLEC11Q9BWP8 271 aa9.51□□□□□ -0.89
CDKL3-208ENST00000522501 MIOSQ9NXC5 875 aa9.51□□□□□ -0.89
CDKL3-208ENST00000522501 PCDHGC3Q9UN70 934 aa9.51□□□□□ -0.89
CDKL3-208ENST00000522501 HES2Q9Y543 173 aa9.51□□□□□ -0.89
CDKL3-208ENST00000522501 PPME1Q9Y570 386 aa9.51□□□□□ -0.89
CDKL3-208ENST00000522501 ZFYVE26Q68DK2 2539 aa9.5□□□□□ -0.89
CDKL3-208ENST00000522501 CCDC196A0A1B0GTZ2 297 aa9.5□□□□□ -0.89
CDKL3-208ENST00000522501 PRPF3O43395 683 aaKnown RBP9.5□□□□□ -0.89
CDKL3-208ENST00000522501 XYLBO75191 536 aa9.5□□□□□ -0.89
CDKL3-208ENST00000522501 ERLIN2O94905 339 aa9.5□□□□□ -0.89
CDKL3-208ENST00000522501 CTDNEP1O95476 244 aa9.5□□□□□ -0.89
CDKL3-208ENST00000522501 TDP2O95551 362 aa9.5□□□□□ -0.89
CDKL3-208ENST00000522501 AXLP30530 894 aa9.5□□□□□ -0.89
CDKL3-208ENST00000522501 RFC5P40937 340 aa9.5□□□□□ -0.89
CDKL3-208ENST00000522501 NPEPPSP55786 919 aa9.5□□□□□ -0.89
CDKL3-208ENST00000522501 PSMC5P62195 406 aa9.5□□□□□ -0.89
CDKL3-208ENST00000522501 CCT2P78371 535 aaKnown RBP9.5□□□□□ -0.89
CDKL3-208ENST00000522501 SPEM2Q0P670 501 aa9.5□□□□□ -0.89
CDKL3-208ENST00000522501 GRIK3Q13003 919 aa9.5□□□□□ -0.89
CDKL3-208ENST00000522501 FZD5Q13467 585 aa9.5□□□□□ -0.89
CDKL3-208ENST00000522501 EMC2Q15006 297 aa9.5□□□□□ -0.89
CDKL3-208ENST00000522501 PCBP1Q15365 356 aaKnown RBP eCLIP9.5□□□□□ -0.89
CDKL3-208ENST00000522501 STX1AQ16623 288 aa9.5□□□□□ -0.89
CDKL3-208ENST00000522501 PPM1LQ5SGD2 360 aa9.5□□□□□ -0.89
CDKL3-208ENST00000522501 LAIR1Q6GTX8 287 aa9.5□□□□□ -0.89
CDKL3-208ENST00000522501 FAM173BQ6P4H8 233 aa9.5□□□□□ -0.89
CDKL3-208ENST00000522501 PRSS55Q6UWB4 352 aaPredicted RBP9.5□□□□□ -0.89
CDKL3-208ENST00000522501 ARHGAP30Q7Z6I6 1101 aaPredicted RBP9.5□□□□□ -0.89
CDKL3-208ENST00000522501 GSTCDQ8NEC7 633 aa9.5□□□□□ -0.89
CDKL3-208ENST00000522501 ITFG1Q8TB96 612 aa9.5□□□□□ -0.89
CDKL3-208ENST00000522501 TBCKQ8TEA7 893 aa9.5□□□□□ -0.89
CDKL3-208ENST00000522501 PRPF31Q8WWY3 499 aaKnown RBP9.5□□□□□ -0.89
CDKL3-208ENST00000522501 PIK3R5Q8WYR1 880 aa9.5□□□□□ -0.89
CDKL3-208ENST00000522501 TMEM143Q96AN5 459 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms