RNA–Protein interactions for RNA: ENST00000520953.5

SREK1-209, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 5

Gene SREK1, Length 2,172 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-209ENST00000520953 PTGESO14684 152 aa16.23■□□□□ 0.19
SREK1-209ENST00000520953 PPEF2O14830 753 aa16.23■□□□□ 0.19
SREK1-209ENST00000520953 P4HA2O15460 535 aa16.23■□□□□ 0.19
SREK1-209ENST00000520953 STX10O60499 249 aa16.23■□□□□ 0.19
SREK1-209ENST00000520953 N4BP1O75113 896 aaKnown RBP16.23■□□□□ 0.19
SREK1-209ENST00000520953 GTF2F1P35269 517 aaKnown RBP eCLIP16.23■□□□□ 0.19
SREK1-209ENST00000520953 MLH1P40692 756 aa16.23■□□□□ 0.19
SREK1-209ENST00000520953 MYL6P60660 151 aa16.23■□□□□ 0.19
SREK1-209ENST00000520953 NCOA4Q13772 614 aa16.23■□□□□ 0.19
SREK1-209ENST00000520953 TMEM132DQ14C87 1099 aa16.23■□□□□ 0.19
SREK1-209ENST00000520953 PLEKHG4Q58EX7 1191 aa16.23■□□□□ 0.19
SREK1-209ENST00000520953 FIGNQ5HY92 759 aa16.23■□□□□ 0.19
SREK1-209ENST00000520953 GSTCDQ8NEC7 633 aa16.23■□□□□ 0.19
SREK1-209ENST00000520953 GAD1Q99259 594 aa16.23■□□□□ 0.19
SREK1-209ENST00000520953 ARID3AQ99856 593 aa16.23■□□□□ 0.19
SREK1-209ENST00000520953 NAA15Q9BXJ9 866 aaKnown RBP16.23■□□□□ 0.19
SREK1-209ENST00000520953 GOLGA2P5Q9HBQ8 144 aa16.23■□□□□ 0.19
SREK1-209ENST00000520953 MIOSQ9NXC5 875 aa16.23■□□□□ 0.19
SREK1-209ENST00000520953 LUC7L2Q9Y383 392 aaKnown RBP16.23■□□□□ 0.19
SREK1-209ENST00000520953 RIOK3O14730 519 aaKnown RBP16.23■□□□□ 0.19
SREK1-209ENST00000520953 PMM2O15305 246 aa16.23■□□□□ 0.19
SREK1-209ENST00000520953 PHACTR2O75167 634 aa16.23■□□□□ 0.19
SREK1-209ENST00000520953 IGFBP6P24592 240 aaPredicted RBP16.23■□□□□ 0.19
SREK1-209ENST00000520953 KCNJ6P48051 423 aa16.23■□□□□ 0.19
SREK1-209ENST00000520953 YARSP54577 528 aaKnown RBP16.23■□□□□ 0.19
SREK1-209ENST00000520953 SOX4Q06945 474 aaPredicted RBP16.23■□□□□ 0.19
SREK1-209ENST00000520953 RAPGEF1Q13905 1077 aa16.23■□□□□ 0.19
SREK1-209ENST00000520953 APBB1IPQ7Z5R6 666 aaPredicted RBP16.23■□□□□ 0.19
SREK1-209ENST00000520953 KREMEN1Q96MU8 473 aa16.23■□□□□ 0.19
SREK1-209ENST00000520953 GPR88Q9GZN0 384 aa16.23■□□□□ 0.19
SREK1-209ENST00000520953 ASB7Q9H672 318 aa16.23■□□□□ 0.19
SREK1-209ENST00000520953 UBE2TQ9NPD8 197 aaPredicted RBP16.23■□□□□ 0.19
SREK1-209ENST00000520953 CEP72Q9P209 647 aa16.23■□□□□ 0.19
SREK1-209ENST00000520953 CNTN3Q9P232 1028 aa16.23■□□□□ 0.19
SREK1-209ENST00000520953 APEX2Q9UBZ4 518 aa16.23■□□□□ 0.19
SREK1-209ENST00000520953 DNAJC12Q9UKB3 198 aa16.23■□□□□ 0.19
SREK1-209ENST00000520953 PDCD11Q14690 1871 aaKnown RBP16.22■□□□□ 0.19
SREK1-209ENST00000520953 A0A0U1RQF3 1178 aa16.22■□□□□ 0.19
SREK1-209ENST00000520953 SMIM28A0A1B0GU29 152 aa16.22■□□□□ 0.19
SREK1-209ENST00000520953 ITGB3P05106 788 aa16.22■□□□□ 0.19
SREK1-209ENST00000520953 KRT19P08727 400 aa16.22■□□□□ 0.19
SREK1-209ENST00000520953 ITGA4P13612 1032 aa16.22■□□□□ 0.19
SREK1-209ENST00000520953 KYAT1Q16773 422 aa16.22■□□□□ 0.19
SREK1-209ENST00000520953 ARHGAP44Q17R89 818 aa16.22■□□□□ 0.19
SREK1-209ENST00000520953 WDR59Q6PJI9 974 aa16.22■□□□□ 0.19
SREK1-209ENST00000520953 CACNA2D4Q7Z3S7 1137 aa16.22■□□□□ 0.19
SREK1-209ENST00000520953 NUP58Q9BVL2 599 aa16.22■□□□□ 0.19
SREK1-209ENST00000520953 NUB1Q9Y5A7 615 aa16.22■□□□□ 0.19
SREK1-209ENST00000520953 A0A1W2PQJ5 194 aa16.21■□□□□ 0.19
SREK1-209ENST00000520953 CETN1Q12798 172 aa16.21■□□□□ 0.19
SREK1-209ENST00000520953 TRIM14Q14142 442 aa16.21■□□□□ 0.19
SREK1-209ENST00000520953 SURF1Q15526 300 aa16.21■□□□□ 0.19
SREK1-209ENST00000520953 ZBTB6Q15916 424 aa16.21■□□□□ 0.19
SREK1-209ENST00000520953 PDXDC1Q6P996 788 aa16.21■□□□□ 0.19
SREK1-209ENST00000520953 MRPL10Q7Z7H8 261 aaKnown RBP16.21■□□□□ 0.19
SREK1-209ENST00000520953 ECHDC2Q86YB7 292 aa16.21■□□□□ 0.19
SREK1-209ENST00000520953 HELQQ8TDG4 1101 aa16.21■□□□□ 0.19
SREK1-209ENST00000520953 ANKRD36BP1Q96IX9 119 aa16.21■□□□□ 0.19
SREK1-209ENST00000520953 CHP1Q99653 195 aa16.21■□□□□ 0.19
SREK1-209ENST00000520953 RGS18Q9NS28 235 aa16.21■□□□□ 0.19
SREK1-209ENST00000520953 C9IYK1 514 aa16.21■□□□□ 0.19
SREK1-209ENST00000520953 NRDCO43847 1150 aa16.21■□□□□ 0.19
SREK1-209ENST00000520953 CLSTN1O94985 981 aa16.21■□□□□ 0.19
SREK1-209ENST00000520953 TNNC2P02585 160 aa16.21■□□□□ 0.19
SREK1-209ENST00000520953 PLEKP08567 350 aaPredicted RBP16.21■□□□□ 0.19
SREK1-209ENST00000520953 POLR2BP30876 1174 aaKnown RBP16.21■□□□□ 0.19
SREK1-209ENST00000520953 ZBED6P86452 979 aa16.21■□□□□ 0.19
SREK1-209ENST00000520953 ARID5AQ03989 594 aa16.21■□□□□ 0.19
SREK1-209ENST00000520953 HSP90AA2PQ14568 343 aaPredicted RBP16.21■□□□□ 0.19
SREK1-209ENST00000520953 MTF1Q14872 753 aa16.21■□□□□ 0.19
SREK1-209ENST00000520953 XKR4Q5GH76 650 aa16.21■□□□□ 0.19
SREK1-209ENST00000520953 COL13A1Q5TAT6 717 aaPredicted RBP16.21■□□□□ 0.19
SREK1-209ENST00000520953 ZNF598Q86UK7 904 aaKnown RBP16.21■□□□□ 0.19
SREK1-209ENST00000520953 CNGA4Q8IV77 575 aa16.21■□□□□ 0.19
SREK1-209ENST00000520953 PPM1KQ8N3J5 372 aa16.21■□□□□ 0.19
SREK1-209ENST00000520953 CCDC112Q8NEF3 446 aa16.21■□□□□ 0.19
SREK1-209ENST00000520953 RABGGTAQ92696 567 aa16.21■□□□□ 0.19
SREK1-209ENST00000520953 DNAJC7Q99615 494 aa16.21■□□□□ 0.19
SREK1-209ENST00000520953 XYLT2Q9H1B5 865 aa16.21■□□□□ 0.19
SREK1-209ENST00000520953 PLEKHA5Q9HAU0 1116 aa16.21■□□□□ 0.19
SREK1-209ENST00000520953 DPP3Q9NY33 737 aa16.21■□□□□ 0.19
SREK1-209ENST00000520953 C2CD2Q9Y426 696 aa16.21■□□□□ 0.19
SREK1-209ENST00000520953 SCN1AP35498 2009 aa16.2■□□□□ 0.18
SREK1-209ENST00000520953 ARL5CA6NH57 179 aa16.2■□□□□ 0.18
SREK1-209ENST00000520953 ZNF623O75123 536 aa16.2■□□□□ 0.18
SREK1-209ENST00000520953 SCNN1GP51170 649 aa16.2■□□□□ 0.18
SREK1-209ENST00000520953 JAM2P57087 298 aa16.2■□□□□ 0.18
SREK1-209ENST00000520953 PTPN14Q15678 1187 aa16.2■□□□□ 0.18
SREK1-209ENST00000520953 TRAIPQ9BWF2 469 aa16.2■□□□□ 0.18
SREK1-209ENST00000520953 TSPYL2Q9H2G4 693 aaPredicted RBP16.2■□□□□ 0.18
SREK1-209ENST00000520953 RANBP2P49792 3224 aaKnown RBP16.2■□□□□ 0.18
SREK1-209ENST00000520953 SOWAHDA6NJG2 315 aa16.2■□□□□ 0.18
SREK1-209ENST00000520953 ENPP3O14638 875 aa16.2■□□□□ 0.18
SREK1-209ENST00000520953 CALCAP01258 141 aa16.2■□□□□ 0.18
SREK1-209ENST00000520953 CXCL10P02778 98 aa16.2■□□□□ 0.18
SREK1-209ENST00000520953 FGFR1P11362 822 aa16.2■□□□□ 0.18
SREK1-209ENST00000520953 GATMP50440 423 aa16.2■□□□□ 0.18
SREK1-209ENST00000520953 NOP14P78316 857 aaKnown RBP16.2■□□□□ 0.18
SREK1-209ENST00000520953 POU5F1Q01860 360 aaKnown RBP16.2■□□□□ 0.18
SREK1-209ENST00000520953 DRAP1Q14919 205 aaPredicted RBP16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms