RNA–Protein interactions for RNA: ENST00000520630.1

CSMD1-209, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 5

Gene CSMD1, Length 312 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-209ENST00000520630 UBN1Q9NPG3 1134 aa8.88□□□□□ -0.99
CSMD1-209ENST00000520630 POLR3BQ9NW08 1133 aaPredicted RBP8.88□□□□□ -0.99
CSMD1-209ENST00000520630 GIT1Q9Y2X7 761 aa8.88□□□□□ -0.99
CSMD1-209ENST00000520630 MRPS23Q9Y3D9 190 aaKnown RBP8.88□□□□□ -0.99
CSMD1-209ENST00000520630 SLC12A7Q9Y666 1083 aa8.88□□□□□ -0.99
CSMD1-209ENST00000520630 NID2Q14112 1375 aa8.87□□□□□ -0.99
CSMD1-209ENST00000520630 CFAP46Q8IYW2 2715 aa8.87□□□□□ -0.99
CSMD1-209ENST00000520630 ESYT2A0FGR8 921 aa8.87□□□□□ -0.99
CSMD1-209ENST00000520630 ARHGEF37A1IGU5 675 aa8.87□□□□□ -0.99
CSMD1-209ENST00000520630 WDR27A2RRH5 827 aa8.87□□□□□ -0.99
CSMD1-209ENST00000520630 TMEM8BA6NDV4 472 aa8.87□□□□□ -0.99
CSMD1-209ENST00000520630 TTLL13PA6NNM8 815 aa8.87□□□□□ -0.99
CSMD1-209ENST00000520630 DDX11L8A8MPP1 907 aa8.87□□□□□ -0.99
CSMD1-209ENST00000520630 hCG_1984214I3L0E3 225 aa8.87□□□□□ -0.99
CSMD1-209ENST00000520630 ZBTB39O15060 712 aa8.87□□□□□ -0.99
CSMD1-209ENST00000520630 B4GALT5O43286 388 aa8.87□□□□□ -0.99
CSMD1-209ENST00000520630 EXTL3O43909 919 aa8.87□□□□□ -0.99
CSMD1-209ENST00000520630 XYLBO75191 536 aa8.87□□□□□ -0.99
CSMD1-209ENST00000520630 TADA2AO75478 443 aa8.87□□□□□ -0.99
CSMD1-209ENST00000520630 ARF4P18085 180 aaPredicted RBP8.87□□□□□ -0.99
CSMD1-209ENST00000520630 SFNP31947 248 aa8.87□□□□□ -0.99
CSMD1-209ENST00000520630 PXNP49023 591 aaPredicted RBP8.87□□□□□ -0.99
CSMD1-209ENST00000520630 DNM2P50570 870 aa8.87□□□□□ -0.99
CSMD1-209ENST00000520630 NOVA1P51513 510 aaKnown RBP8.87□□□□□ -0.99
CSMD1-209ENST00000520630 JAK3P52333 1124 aa8.87□□□□□ -0.99
CSMD1-209ENST00000520630 CREMQ03060 361 aa8.87□□□□□ -0.99
CSMD1-209ENST00000520630 ZNF252P-AS1Q0IIN9 211 aa8.87□□□□□ -0.99
CSMD1-209ENST00000520630 CCINQ13939 588 aa8.87□□□□□ -0.99
CSMD1-209ENST00000520630 HSP90AA2PQ14568 343 aaPredicted RBP8.87□□□□□ -0.99
CSMD1-209ENST00000520630 PFKFB3Q16875 520 aaPredicted RBP8.87□□□□□ -0.99
CSMD1-209ENST00000520630 LIN9Q5TKA1 542 aa8.87□□□□□ -0.99
CSMD1-209ENST00000520630 LRCH2Q5VUJ6 765 aa8.87□□□□□ -0.99
CSMD1-209ENST00000520630 FERMT3Q86UX7 667 aa8.87□□□□□ -0.99
CSMD1-209ENST00000520630 CEP57Q86XR8 500 aa8.87□□□□□ -0.99
CSMD1-209ENST00000520630 HS6ST3Q8IZP7 471 aa8.87□□□□□ -0.99
CSMD1-209ENST00000520630 ZNF713Q8N859 430 aaPredicted RBP8.87□□□□□ -0.99
CSMD1-209ENST00000520630 CNNM3Q8NE01 707 aa8.87□□□□□ -0.99
CSMD1-209ENST00000520630 GAB3Q8WWW8 586 aa8.87□□□□□ -0.99
CSMD1-209ENST00000520630 ZCCHC14Q8WYQ9 949 aaKnown RBP8.87□□□□□ -0.99
CSMD1-209ENST00000520630 LOXL4Q96JB6 756 aa8.87□□□□□ -0.99
CSMD1-209ENST00000520630 TRMT61BQ9BVS5 477 aaKnown RBP8.87□□□□□ -0.99
CSMD1-209ENST00000520630 CSRNP2Q9H175 543 aa8.87□□□□□ -0.99
CSMD1-209ENST00000520630 SLKQ9H2G2 1235 aaPredicted RBP8.87□□□□□ -0.99
CSMD1-209ENST00000520630 XPNPEP1Q9NQW7 623 aa8.87□□□□□ -0.99
CSMD1-209ENST00000520630 BMP2KQ9NSY1 1161 aaPredicted RBP8.87□□□□□ -0.99
CSMD1-209ENST00000520630 MTRRQ9UBK8 725 aa8.87□□□□□ -0.99
CSMD1-209ENST00000520630 SF3B1O75533 1304 aaKnown RBP eCLIP8.86□□□□□ -0.99
CSMD1-209ENST00000520630 ATMQ13315 3056 aa8.86□□□□□ -0.99
CSMD1-209ENST00000520630 CASTOR2A6NHX0 329 aa8.86□□□□□ -0.99
CSMD1-209ENST00000520630 C4orf47A7E2U8 309 aa8.86□□□□□ -0.99
CSMD1-209ENST00000520630 CDX4O14627 284 aaPredicted RBP8.86□□□□□ -0.99
CSMD1-209ENST00000520630 GAS7O60861 476 aa8.86□□□□□ -0.99
CSMD1-209ENST00000520630 DTNBO60941 627 aa8.86□□□□□ -0.99
CSMD1-209ENST00000520630 CTDNEP1O95476 244 aa8.86□□□□□ -0.99
CSMD1-209ENST00000520630 SEC24AO95486 1093 aa8.86□□□□□ -0.99
CSMD1-209ENST00000520630 GJA1P17302 382 aa8.86□□□□□ -0.99
CSMD1-209ENST00000520630 PSMC3P17980 439 aa8.86□□□□□ -0.99
CSMD1-209ENST00000520630 FGFR3P22607 806 aa8.86□□□□□ -0.99
CSMD1-209ENST00000520630 ADD1P35611 737 aaKnown RBP8.86□□□□□ -0.99
CSMD1-209ENST00000520630 PTENP60484 403 aa8.86□□□□□ -0.99
CSMD1-209ENST00000520630 CCT2P78371 535 aaKnown RBP8.86□□□□□ -0.99
CSMD1-209ENST00000520630 MBTD1Q05BQ5 628 aa8.86□□□□□ -0.99
CSMD1-209ENST00000520630 GRIK3Q13003 919 aa8.86□□□□□ -0.99
CSMD1-209ENST00000520630 PPP2R5DQ14738 602 aa8.86□□□□□ -0.99
CSMD1-209ENST00000520630 SH3PXD2AQ5TCZ1 1133 aa8.86□□□□□ -0.99
CSMD1-209ENST00000520630 RNF43Q68DV7 783 aa8.86□□□□□ -0.99
CSMD1-209ENST00000520630 CEP68Q76N32 757 aa8.86□□□□□ -0.99
CSMD1-209ENST00000520630 MIER3Q7Z3K6 550 aa8.86□□□□□ -0.99
CSMD1-209ENST00000520630 IFNLR1Q8IU57 520 aaPredicted RBP8.86□□□□□ -0.99
CSMD1-209ENST00000520630 C12orf50Q8NA57 414 aaPredicted RBP8.86□□□□□ -0.99
CSMD1-209ENST00000520630 RNF149Q8NC42 400 aa8.86□□□□□ -0.99
CSMD1-209ENST00000520630 RDM1Q8NG50 284 aa8.86□□□□□ -0.99
CSMD1-209ENST00000520630 ETNPPLQ8TBG4 499 aa8.86□□□□□ -0.99
CSMD1-209ENST00000520630 IRF7Q92985 503 aa8.86□□□□□ -0.99
CSMD1-209ENST00000520630 CHFRQ96EP1 664 aa8.86□□□□□ -0.99
CSMD1-209ENST00000520630 DDX27Q96GQ7 796 aaKnown RBP8.86□□□□□ -0.99
CSMD1-209ENST00000520630 ZC3H10Q96K80 434 aaKnown RBP8.86□□□□□ -0.99
CSMD1-209ENST00000520630 TEKT3Q9BXF9 490 aa8.86□□□□□ -0.99
CSMD1-209ENST00000520630 DUSP15Q9H1R2 295 aaPredicted RBP8.86□□□□□ -0.99
CSMD1-209ENST00000520630 NCOA5Q9HCD5 579 aaKnown RBP8.86□□□□□ -0.99
CSMD1-209ENST00000520630 ZFP14Q9HCL3 533 aa8.86□□□□□ -0.99
CSMD1-209ENST00000520630 SNTG2Q9NY99 539 aa8.86□□□□□ -0.99
CSMD1-209ENST00000520630 CDY1Q9Y6F8 540 aa8.86□□□□□ -0.99
CSMD1-209ENST00000520630 ZMYM2Q9UBW7 1377 aa8.86□□□□□ -0.99
CSMD1-209ENST00000520630 SLC38A8A6NNN8 435 aa8.85□□□□□ -0.99
CSMD1-209ENST00000520630 GOLGA8BA8MQT2 603 aa8.85□□□□□ -0.99
CSMD1-209ENST00000520630 ZBTB43O43298 467 aa8.85□□□□□ -0.99
CSMD1-209ENST00000520630 ABLIM3O94929 683 aa8.85□□□□□ -0.99
CSMD1-209ENST00000520630 TDP2O95551 362 aa8.85□□□□□ -0.99
CSMD1-209ENST00000520630 PTPN2P17706 415 aa8.85□□□□□ -0.99
CSMD1-209ENST00000520630 MPLP40238 635 aa8.85□□□□□ -0.99
CSMD1-209ENST00000520630 RCAN1P53805 252 aa8.85□□□□□ -0.99
CSMD1-209ENST00000520630 MLLT6P55198 1093 aaPredicted RBP8.85□□□□□ -0.99
CSMD1-209ENST00000520630 TUSC3Q13454 348 aa8.85□□□□□ -0.99
CSMD1-209ENST00000520630 RTN1Q16799 776 aa8.85□□□□□ -0.99
CSMD1-209ENST00000520630 PLK5Q496M5 336 aa8.85□□□□□ -0.99
CSMD1-209ENST00000520630 Q4G0T1 1027 aa8.85□□□□□ -0.99
CSMD1-209ENST00000520630 NOTUMQ6P988 496 aa8.85□□□□□ -0.99
CSMD1-209ENST00000520630 GPIHBP1Q8IV16 184 aa8.85□□□□□ -0.99
CSMD1-209ENST00000520630 MFSD6LQ8IWD5 586 aa8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms