RNA–Protein interactions for RNA: ENST00000519489.1

CTNNA1-216, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 358 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-216ENST00000519489 KRT25Q7Z3Z0 450 aa7.73□□□□□ -1.17
CTNNA1-216ENST00000519489 COLGALT2Q8IYK4 626 aa7.73□□□□□ -1.17
CTNNA1-216ENST00000519489 SYNPOQ8N3V7 929 aa7.73□□□□□ -1.17
CTNNA1-216ENST00000519489 MINDY1Q8N5J2 469 aa7.73□□□□□ -1.17
CTNNA1-216ENST00000519489 CAMKK1Q8N5S9 505 aa7.73□□□□□ -1.17
CTNNA1-216ENST00000519489 RABGGTAQ92696 567 aa7.73□□□□□ -1.17
CTNNA1-216ENST00000519489 EZH1Q92800 747 aaPredicted RBP7.73□□□□□ -1.17
CTNNA1-216ENST00000519489 ZFYVE19Q96K21 471 aa7.73□□□□□ -1.17
CTNNA1-216ENST00000519489 TMEM175Q9BSA9 504 aa7.73□□□□□ -1.17
CTNNA1-216ENST00000519489 NUSAP1Q9BXS6 441 aaKnown RBP7.73□□□□□ -1.17
CTNNA1-216ENST00000519489 TPSD1Q9BZJ3 242 aa7.73□□□□□ -1.17
CTNNA1-216ENST00000519489 CAPN10Q9HC96 672 aa7.73□□□□□ -1.17
CTNNA1-216ENST00000519489 MIOSQ9NXC5 875 aa7.73□□□□□ -1.17
CTNNA1-216ENST00000519489 PLK4O00444 970 aa7.72□□□□□ -1.17
CTNNA1-216ENST00000519489 OPHN1O60890 802 aa7.72□□□□□ -1.17
CTNNA1-216ENST00000519489 DARSP14868 501 aaKnown RBP7.72□□□□□ -1.17
CTNNA1-216ENST00000519489 KPNA1P52294 538 aaPredicted RBP7.72□□□□□ -1.17
CTNNA1-216ENST00000519489 TNK2Q07912 1038 aa7.72□□□□□ -1.17
CTNNA1-216ENST00000519489 GPATCH4Q5T3I0 446 aaKnown RBP7.72□□□□□ -1.17
CTNNA1-216ENST00000519489 PEAR1Q5VY43 1037 aaPredicted RBP7.72□□□□□ -1.17
CTNNA1-216ENST00000519489 PLPPR4Q7Z2D5 763 aa7.72□□□□□ -1.17
CTNNA1-216ENST00000519489 GLRX5Q86SX6 157 aa7.72□□□□□ -1.17
CTNNA1-216ENST00000519489 MFSD6LQ8IWD5 586 aa7.72□□□□□ -1.17
CTNNA1-216ENST00000519489 HDDC3Q8N4P3 179 aa7.72□□□□□ -1.17
CTNNA1-216ENST00000519489 APPBP2Q92624 585 aa7.72□□□□□ -1.17
CTNNA1-216ENST00000519489 MTMR8Q96EF0 704 aa7.72□□□□□ -1.17
CTNNA1-216ENST00000519489 MED8Q96G25 268 aa7.72□□□□□ -1.17
CTNNA1-216ENST00000519489 FNBP1Q96RU3 617 aa7.72□□□□□ -1.17
CTNNA1-216ENST00000519489 TRAIPQ9BWF2 469 aa7.72□□□□□ -1.17
CTNNA1-216ENST00000519489 C8orf33Q9H7E9 229 aaPredicted RBP7.72□□□□□ -1.17
CTNNA1-216ENST00000519489 DNAAF2Q9NVR5 837 aaKnown RBP7.72□□□□□ -1.17
CTNNA1-216ENST00000519489 KIAA1522Q9P206 1035 aaPredicted RBP7.72□□□□□ -1.17
CTNNA1-216ENST00000519489 CACNG4Q9UBN1 327 aa7.72□□□□□ -1.17
CTNNA1-216ENST00000519489 EBF1Q9UH73 591 aa7.72□□□□□ -1.17
CTNNA1-216ENST00000519489 SSX2IPQ9Y2D8 614 aa7.72□□□□□ -1.17
CTNNA1-216ENST00000519489 F8P00451 2351 aa7.72□□□□□ -1.17
CTNNA1-216ENST00000519489 CABIN1Q9Y6J0 2220 aa7.72□□□□□ -1.17
CTNNA1-216ENST00000519489 NID2Q14112 1375 aa7.71□□□□□ -1.17
CTNNA1-216ENST00000519489 PCDH15Q96QU1 1955 aa7.71□□□□□ -1.17
CTNNA1-216ENST00000519489 TSC2P49815 1807 aa7.71□□□□□ -1.17
CTNNA1-216ENST00000519489 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa7.71□□□□□ -1.18
CTNNA1-216ENST00000519489 HEPACAM2A8MVW5 462 aa7.71□□□□□ -1.18
CTNNA1-216ENST00000519489 GCOM1H8Y6P7 765 aaPredicted RBP7.71□□□□□ -1.18
CTNNA1-216ENST00000519489 CAPN5O15484 640 aaPredicted RBP7.71□□□□□ -1.18
CTNNA1-216ENST00000519489 WIPF1O43516 503 aa7.71□□□□□ -1.18
CTNNA1-216ENST00000519489 XYLBO75191 536 aa7.71□□□□□ -1.18
CTNNA1-216ENST00000519489 EGFP01133 1207 aa7.71□□□□□ -1.18
CTNNA1-216ENST00000519489 POLR2MP0CAP2 368 aa7.71□□□□□ -1.18
CTNNA1-216ENST00000519489 GJA1P17302 382 aa7.71□□□□□ -1.18
CTNNA1-216ENST00000519489 ITPKAP23677 461 aa7.71□□□□□ -1.18
CTNNA1-216ENST00000519489 OR1G1P47890 313 aa7.71□□□□□ -1.18
CTNNA1-216ENST00000519489 STAT5BP51692 787 aa7.71□□□□□ -1.18
CTNNA1-216ENST00000519489 SEMG2Q02383 582 aa7.71□□□□□ -1.18
CTNNA1-216ENST00000519489 DSC1Q08554 894 aa7.71□□□□□ -1.18
CTNNA1-216ENST00000519489 HNRNPDQ14103 355 aaKnown RBP7.71□□□□□ -1.18
CTNNA1-216ENST00000519489 RALGPS2Q86X27 583 aaPredicted RBP7.71□□□□□ -1.18
CTNNA1-216ENST00000519489 SYT12Q8IV01 421 aa7.71□□□□□ -1.18
CTNNA1-216ENST00000519489 NAXDQ8IW45 347 aa7.71□□□□□ -1.18
CTNNA1-216ENST00000519489 SPACA3Q8IXA5 215 aa7.71□□□□□ -1.18
CTNNA1-216ENST00000519489 STAG2Q8N3U4 1231 aa7.71□□□□□ -1.18
CTNNA1-216ENST00000519489 SMARCD2Q92925 531 aa7.71□□□□□ -1.18
CTNNA1-216ENST00000519489 LIN37Q96GY3 246 aaPredicted RBP7.71□□□□□ -1.18
CTNNA1-216ENST00000519489 AMNQ9BXJ7 453 aa7.71□□□□□ -1.18
CTNNA1-216ENST00000519489 BCL11AQ9H165 835 aa7.71□□□□□ -1.18
CTNNA1-216ENST00000519489 TRPV4Q9HBA0 871 aa7.71□□□□□ -1.18
CTNNA1-216ENST00000519489 CPNE5Q9HCH3 593 aa7.71□□□□□ -1.18
CTNNA1-216ENST00000519489 AVENQ9NQS1 362 aaPredicted RBP7.71□□□□□ -1.18
CTNNA1-216ENST00000519489 MAP3K20Q9NYL2 800 aaKnown RBP7.71□□□□□ -1.18
CTNNA1-216ENST00000519489 STK39Q9UEW8 545 aa7.71□□□□□ -1.18
CTNNA1-216ENST00000519489 PILRBQ9UKJ0 227 aa7.71□□□□□ -1.18
CTNNA1-216ENST00000519489 PCOLCE2Q9UKZ9 415 aa7.71□□□□□ -1.18
CTNNA1-216ENST00000519489 APOBEC2Q9Y235 224 aaKnown RBP7.71□□□□□ -1.18
CTNNA1-216ENST00000519489 PCNX1Q96RV3 2341 aa7.7□□□□□ -1.18
CTNNA1-216ENST00000519489 ADGRG4Q8IZF6 3080 aa7.7□□□□□ -1.18
CTNNA1-216ENST00000519489 SPTBN1Q01082 2364 aaKnown RBP7.7□□□□□ -1.18
CTNNA1-216ENST00000519489 MTCL1Q9Y4B5 1905 aaKnown RBP7.7□□□□□ -1.18
CTNNA1-216ENST00000519489 CELSR2Q9HCU4 2923 aa7.7□□□□□ -1.18
CTNNA1-216ENST00000519489 TLN1Q9Y490 2541 aaKnown RBP7.7□□□□□ -1.18
CTNNA1-216ENST00000519489 IGKV6D-21A0A0A0MT36 114 aa7.7□□□□□ -1.18
CTNNA1-216ENST00000519489 ZNF623O75123 536 aa7.7□□□□□ -1.18
CTNNA1-216ENST00000519489 STAM2O75886 525 aa7.7□□□□□ -1.18
CTNNA1-216ENST00000519489 CFIP05156 583 aa7.7□□□□□ -1.18
CTNNA1-216ENST00000519489 TRIM27P14373 513 aa7.7□□□□□ -1.18
CTNNA1-216ENST00000519489 IGFBP6P24592 240 aaPredicted RBP7.7□□□□□ -1.18
CTNNA1-216ENST00000519489 GPC3P51654 580 aa7.7□□□□□ -1.18
CTNNA1-216ENST00000519489 DGKEP52429 567 aa7.7□□□□□ -1.18
CTNNA1-216ENST00000519489 ACTR2P61160 394 aa7.7□□□□□ -1.18
CTNNA1-216ENST00000519489 MYO1EQ12965 1108 aa7.7□□□□□ -1.18
CTNNA1-216ENST00000519489 KARSQ15046 597 aaKnown RBP7.7□□□□□ -1.18
CTNNA1-216ENST00000519489 MAPK6Q16659 721 aa7.7□□□□□ -1.18
CTNNA1-216ENST00000519489 UVSSAQ2YD98 709 aa7.7□□□□□ -1.18
CTNNA1-216ENST00000519489 TMEM196Q5HYL7 178 aa7.7□□□□□ -1.18
CTNNA1-216ENST00000519489 AXDND1Q5T1B0 1012 aaPredicted RBP7.7□□□□□ -1.18
CTNNA1-216ENST00000519489 LIN9Q5TKA1 542 aa7.7□□□□□ -1.18
CTNNA1-216ENST00000519489 PCNX4Q63HM2 1172 aa7.7□□□□□ -1.18
CTNNA1-216ENST00000519489 FUT10Q6P4F1 479 aa7.7□□□□□ -1.18
CTNNA1-216ENST00000519489 LRRC69Q6ZNQ3 347 aa7.7□□□□□ -1.18
CTNNA1-216ENST00000519489 TRIM46Q7Z4K8 759 aa7.7□□□□□ -1.18
CTNNA1-216ENST00000519489 LRRC71Q8N4P6 559 aa7.7□□□□□ -1.18
CTNNA1-216ENST00000519489 EXD3Q8N9H8 876 aa7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms