RNA–Protein interactions for RNA: ENST00000519474.5

HDAC3-215, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-215ENST00000519474 TKTP29401 623 aaKnown RBP10.19□□□□□ -0.78
HDAC3-215ENST00000519474 OR1D2P34982 312 aa10.19□□□□□ -0.78
HDAC3-215ENST00000519474 MATR3P43243 847 aaKnown RBP eCLIP10.19□□□□□ -0.78
HDAC3-215ENST00000519474 LIG4P49917 911 aa10.19□□□□□ -0.78
HDAC3-215ENST00000519474 KCNA1Q09470 495 aa10.19□□□□□ -0.78
HDAC3-215ENST00000519474 ENOX2Q16206 610 aaKnown RBP10.19□□□□□ -0.78
HDAC3-215ENST00000519474 PSMD5Q16401 504 aa10.19□□□□□ -0.78
HDAC3-215ENST00000519474 FOXD4L6Q3SYB3 417 aaPredicted RBP10.19□□□□□ -0.78
HDAC3-215ENST00000519474 SHC4Q6S5L8 630 aa10.19□□□□□ -0.78
HDAC3-215ENST00000519474 FOXD4L3Q6VB84 417 aaPredicted RBP10.19□□□□□ -0.78
HDAC3-215ENST00000519474 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.19□□□□□ -0.78
HDAC3-215ENST00000519474 CCDC73Q6ZRK6 1079 aa10.19□□□□□ -0.78
HDAC3-215ENST00000519474 TRIM67Q6ZTA4 783 aa10.19□□□□□ -0.78
HDAC3-215ENST00000519474 BMP8AQ7Z5Y6 402 aa10.19□□□□□ -0.78
HDAC3-215ENST00000519474 SFR1Q86XK3 245 aa10.19□□□□□ -0.78
HDAC3-215ENST00000519474 MAP4K3Q8IVH8 894 aa10.19□□□□□ -0.78
HDAC3-215ENST00000519474 PLCD3Q8N3E9 789 aa10.19□□□□□ -0.78
HDAC3-215ENST00000519474 PDILTQ8N807 584 aa10.19□□□□□ -0.78
HDAC3-215ENST00000519474 STAMQ92783 540 aa10.19□□□□□ -0.78
HDAC3-215ENST00000519474 BICD1Q96G01 975 aa10.19□□□□□ -0.78
HDAC3-215ENST00000519474 PRKD2Q9BZL6 878 aa10.19□□□□□ -0.78
HDAC3-215ENST00000519474 ANKFY1Q9P2R3 1169 aa10.19□□□□□ -0.78
HDAC3-215ENST00000519474 MTRRQ9UBK8 725 aa10.19□□□□□ -0.78
HDAC3-215ENST00000519474 DPP7Q9UHL4 492 aa10.19□□□□□ -0.78
HDAC3-215ENST00000519474 CPSF3Q9UKF6 684 aaKnown RBP10.19□□□□□ -0.78
HDAC3-215ENST00000519474 RCOR1Q9UKL0 485 aa10.19□□□□□ -0.78
HDAC3-215ENST00000519474 BACE2Q9Y5Z0 518 aa10.19□□□□□ -0.78
HDAC3-215ENST00000519474 MUC3AQ02505 3323 aa10.18□□□□□ -0.78
HDAC3-215ENST00000519474 MTCL1Q9Y4B5 1905 aaKnown RBP10.18□□□□□ -0.78
HDAC3-215ENST00000519474 FRMD3A2A2Y4 597 aa10.18□□□□□ -0.78
HDAC3-215ENST00000519474 K7ENM7 598 aa10.18□□□□□ -0.78
HDAC3-215ENST00000519474 CUTAO60888 179 aa10.18□□□□□ -0.78
HDAC3-215ENST00000519474 N4BP1O75113 896 aaKnown RBP10.18□□□□□ -0.78
HDAC3-215ENST00000519474 ZMYND10O75800 440 aa10.18□□□□□ -0.78
HDAC3-215ENST00000519474 YEATS4O95619 227 aa10.18□□□□□ -0.78
HDAC3-215ENST00000519474 PTMAP06454 111 aaKnown RBP10.18□□□□□ -0.78
HDAC3-215ENST00000519474 CXCL8P10145 99 aa10.18□□□□□ -0.78
HDAC3-215ENST00000519474 CYP3A5P20815 502 aa10.18□□□□□ -0.78
HDAC3-215ENST00000519474 ADSSP30520 456 aa10.18□□□□□ -0.78
HDAC3-215ENST00000519474 LRPAP1P30533 357 aa10.18□□□□□ -0.78
HDAC3-215ENST00000519474 TXLNAP40222 546 aa10.18□□□□□ -0.78
HDAC3-215ENST00000519474 CREMQ03060 361 aa10.18□□□□□ -0.78
HDAC3-215ENST00000519474 E2F4Q16254 413 aa10.18□□□□□ -0.78
HDAC3-215ENST00000519474 KYAT1Q16773 422 aa10.18□□□□□ -0.78
HDAC3-215ENST00000519474 UVSSAQ2YD98 709 aa10.18□□□□□ -0.78
HDAC3-215ENST00000519474 PDXDC1Q6P996 788 aa10.18□□□□□ -0.78
HDAC3-215ENST00000519474 CRELD2Q6UXH1 353 aaPredicted RBP10.18□□□□□ -0.78
HDAC3-215ENST00000519474 HFE2Q6ZVN8 426 aa10.18□□□□□ -0.78
HDAC3-215ENST00000519474 SMG7Q92540 1137 aaKnown RBP10.18□□□□□ -0.78
HDAC3-215ENST00000519474 SUSD3Q96L08 255 aa10.18□□□□□ -0.78
HDAC3-215ENST00000519474 PLCD4Q9BRC7 762 aa10.18□□□□□ -0.78
HDAC3-215ENST00000519474 RPF1Q9H9Y2 349 aaKnown RBP10.18□□□□□ -0.78
HDAC3-215ENST00000519474 WDR6Q9NNW5 1121 aaKnown RBP10.18□□□□□ -0.78
HDAC3-215ENST00000519474 TBC1D7Q9P0N9 293 aa10.18□□□□□ -0.78
HDAC3-215ENST00000519474 SEL1LQ9UBV2 794 aa10.18□□□□□ -0.78
HDAC3-215ENST00000519474 PCDHA7Q9UN72 937 aa10.18□□□□□ -0.78
HDAC3-215ENST00000519474 ZDHHC9Q9Y397 364 aa10.18□□□□□ -0.78
HDAC3-215ENST00000519474 SPDYE4A6NLX3 237 aa10.17□□□□□ -0.78
HDAC3-215ENST00000519474 HNRNPDLO14979 420 aaKnown RBP10.17□□□□□ -0.78
HDAC3-215ENST00000519474 TBCAO75347 108 aaKnown RBP10.17□□□□□ -0.78
HDAC3-215ENST00000519474 ABLIM3O94929 683 aa10.17□□□□□ -0.78
HDAC3-215ENST00000519474 ASGR2P07307 311 aa10.17□□□□□ -0.78
HDAC3-215ENST00000519474 HSP90AA1P07900 732 aaKnown RBP10.17□□□□□ -0.78
HDAC3-215ENST00000519474 GAP43P17677 238 aa10.17□□□□□ -0.78
HDAC3-215ENST00000519474 ABCD1P33897 745 aa10.17□□□□□ -0.78
HDAC3-215ENST00000519474 STAT6P42226 847 aa10.17□□□□□ -0.78
HDAC3-215ENST00000519474 ACOT2P49753 483 aa10.17□□□□□ -0.78
HDAC3-215ENST00000519474 GUCY2FP51841 1108 aa10.17□□□□□ -0.78
HDAC3-215ENST00000519474 PTPN21Q16825 1174 aa10.17□□□□□ -0.78
HDAC3-215ENST00000519474 SPATA1Q5VX52 437 aa10.17□□□□□ -0.78
HDAC3-215ENST00000519474 ATL3Q6DD88 541 aa10.17□□□□□ -0.78
HDAC3-215ENST00000519474 SLFN12LQ6IEE8 588 aa10.17□□□□□ -0.78
HDAC3-215ENST00000519474 ANKS3Q6ZW76 656 aa10.17□□□□□ -0.78
HDAC3-215ENST00000519474 OTOP3Q7RTS5 596 aa10.17□□□□□ -0.78
HDAC3-215ENST00000519474 ZSWIM2Q8NEG5 633 aa10.17□□□□□ -0.78
HDAC3-215ENST00000519474 FAM212AQ96EL1 285 aa10.17□□□□□ -0.78
HDAC3-215ENST00000519474 KIF12Q96FN5 646 aa10.17□□□□□ -0.78
HDAC3-215ENST00000519474 ASIC4Q96FT7 647 aa10.17□□□□□ -0.78
HDAC3-215ENST00000519474 TSPAN18Q96SJ8 248 aa10.17□□□□□ -0.78
HDAC3-215ENST00000519474 MSTO1Q9BUK6 570 aa10.17□□□□□ -0.78
HDAC3-215ENST00000519474 FGFBP2Q9BYJ0 223 aa10.17□□□□□ -0.78
HDAC3-215ENST00000519474 MRPL44Q9H9J2 332 aaKnown RBP10.17□□□□□ -0.78
HDAC3-215ENST00000519474 PANK4Q9NVE7 773 aa10.17□□□□□ -0.78
HDAC3-215ENST00000519474 KBTBD4Q9NVX7 518 aa10.17□□□□□ -0.78
HDAC3-215ENST00000519474 ZDHHC7Q9NXF8 308 aa10.17□□□□□ -0.78
HDAC3-215ENST00000519474 TUBGCP4Q9UGJ1 667 aa10.17□□□□□ -0.78
HDAC3-215ENST00000519474 FBXW11Q9UKB1 542 aa10.17□□□□□ -0.78
HDAC3-215ENST00000519474 CDY1Q9Y6F8 540 aa10.17□□□□□ -0.78
HDAC3-215ENST00000519474 PLXNA3P51805 1871 aa10.17□□□□□ -0.78
HDAC3-215ENST00000519474 VWA8A3KMH1 1905 aa10.16□□□□□ -0.78
HDAC3-215ENST00000519474 TMEM221A6NGB7 291 aa10.16□□□□□ -0.78
HDAC3-215ENST00000519474 M0R296 226 aa10.16□□□□□ -0.78
HDAC3-215ENST00000519474 SYN3O14994 580 aa10.16□□□□□ -0.78
HDAC3-215ENST00000519474 PRPF6O94906 941 aaKnown RBP10.16□□□□□ -0.78
HDAC3-215ENST00000519474 IDEP14735 1019 aa10.16□□□□□ -0.78
HDAC3-215ENST00000519474 CASP5P51878 434 aa10.16□□□□□ -0.78
HDAC3-215ENST00000519474 POU5F1Q01860 360 aaKnown RBP10.16□□□□□ -0.78
HDAC3-215ENST00000519474 DNM1Q05193 864 aaKnown RBP10.16□□□□□ -0.78
HDAC3-215ENST00000519474 SIGLEC14Q08ET2 396 aa10.16□□□□□ -0.78
HDAC3-215ENST00000519474 POSTNQ15063 836 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms