RNA–Protein interactions for RNA: ENST00000519141.5

SPIDR-209, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 2

Gene SPIDR, Length 1,699 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-209ENST00000519141 JAKMIP2Q96AA8 810 aa13.33□□□□□ -0.28
SPIDR-209ENST00000519141 TRIP11Q15643 1979 aa13.32□□□□□ -0.28
SPIDR-209ENST00000519141 A0A0U1RQJ8 604 aa13.32□□□□□ -0.28
SPIDR-209ENST00000519141 KBTBD13C9JR72 458 aa13.32□□□□□ -0.28
SPIDR-209ENST00000519141 KRT86O43790 486 aa13.32□□□□□ -0.28
SPIDR-209ENST00000519141 KIF5CO60282 957 aa13.32□□□□□ -0.28
SPIDR-209ENST00000519141 NFICP08651 508 aa13.32□□□□□ -0.28
SPIDR-209ENST00000519141 CCL5P13501 91 aa13.32□□□□□ -0.28
SPIDR-209ENST00000519141 TBXAS1P24557 533 aaPredicted RBP13.32□□□□□ -0.28
SPIDR-209ENST00000519141 THPOP40225 353 aa13.32□□□□□ -0.28
SPIDR-209ENST00000519141 ARHGAP25P42331 645 aa13.32□□□□□ -0.28
SPIDR-209ENST00000519141 YARSP54577 528 aaKnown RBP13.32□□□□□ -0.28
SPIDR-209ENST00000519141 PTK7Q13308 1070 aa13.32□□□□□ -0.28
SPIDR-209ENST00000519141 SLC10A6Q3KNW5 377 aa13.32□□□□□ -0.28
SPIDR-209ENST00000519141 CCDC122Q5T0U0 273 aa13.32□□□□□ -0.28
SPIDR-209ENST00000519141 JADE1Q6IE81 842 aa13.32□□□□□ -0.28
SPIDR-209ENST00000519141 ZNF662Q6ZS27 426 aa13.32□□□□□ -0.28
SPIDR-209ENST00000519141 FAM228AQ86W67 206 aa13.32□□□□□ -0.28
SPIDR-209ENST00000519141 CD302Q8IX05 232 aa13.32□□□□□ -0.28
SPIDR-209ENST00000519141 FAM71AQ8IYT1 594 aa13.32□□□□□ -0.28
SPIDR-209ENST00000519141 ATRIPQ8WXE1 791 aa13.32□□□□□ -0.28
SPIDR-209ENST00000519141 EIF2AQ9BY44 585 aaKnown RBP13.32□□□□□ -0.28
SPIDR-209ENST00000519141 TSGA10Q9BZW7 698 aa13.32□□□□□ -0.28
SPIDR-209ENST00000519141 SENP6Q9GZR1 1112 aaPredicted RBP13.32□□□□□ -0.28
SPIDR-209ENST00000519141 RNF208Q9H0X6 261 aa13.32□□□□□ -0.28
SPIDR-209ENST00000519141 ADAMTS1Q9UHI8 967 aa13.32□□□□□ -0.28
SPIDR-209ENST00000519141 NOC2LQ9Y3T9 749 aaKnown RBP13.32□□□□□ -0.28
SPIDR-209ENST00000519141 PCDHA13Q9Y5I0 950 aa13.32□□□□□ -0.28
SPIDR-209ENST00000519141 A0A087X0T9 212 aa13.31□□□□□ -0.28
SPIDR-209ENST00000519141 A0A1W2PQ45 241 aaPredicted RBP13.31□□□□□ -0.28
SPIDR-209ENST00000519141 A0A1W2PQY0 241 aa13.31□□□□□ -0.28
SPIDR-209ENST00000519141 MEFVO15553 781 aaPredicted RBP13.31□□□□□ -0.28
SPIDR-209ENST00000519141 RPS6KA5O75582 802 aa13.31□□□□□ -0.28
SPIDR-209ENST00000519141 ASS1P00966 412 aaKnown RBP13.31□□□□□ -0.28
SPIDR-209ENST00000519141 FAM228BP0C875 321 aa13.31□□□□□ -0.28
SPIDR-209ENST00000519141 MAGEA1P43355 309 aa13.31□□□□□ -0.28
SPIDR-209ENST00000519141 GNG11P61952 73 aa13.31□□□□□ -0.28
SPIDR-209ENST00000519141 KIF5AQ12840 1032 aa13.31□□□□□ -0.28
SPIDR-209ENST00000519141 BMS1Q14692 1282 aaKnown RBP13.31□□□□□ -0.28
SPIDR-209ENST00000519141 TMEM132DQ14C87 1099 aa13.31□□□□□ -0.28
SPIDR-209ENST00000519141 SPOPLQ6IQ16 392 aa13.31□□□□□ -0.28
SPIDR-209ENST00000519141 SYT10Q6XYQ8 523 aa13.31□□□□□ -0.28
SPIDR-209ENST00000519141 NT5DC4Q86YG4 428 aa13.31□□□□□ -0.28
SPIDR-209ENST00000519141 KIF18AQ8NI77 898 aa13.31□□□□□ -0.28
SPIDR-209ENST00000519141 ELMO3Q96BJ8 720 aa13.31□□□□□ -0.28
SPIDR-209ENST00000519141 UNC93B1Q9H1C4 597 aa13.31□□□□□ -0.28
SPIDR-209ENST00000519141 STARD7Q9NQZ5 370 aa13.31□□□□□ -0.28
SPIDR-209ENST00000519141 C2CD2Q9Y426 696 aa13.31□□□□□ -0.28
SPIDR-209ENST00000519141 PDCD11Q14690 1871 aaKnown RBP13.31□□□□□ -0.28
SPIDR-209ENST00000519141 A0A0U1RQG5 324 aaPredicted RBP13.31□□□□□ -0.28
SPIDR-209ENST00000519141 CHRNA1P02708 482 aa13.31□□□□□ -0.28
SPIDR-209ENST00000519141 GJA8P48165 433 aa13.31□□□□□ -0.28
SPIDR-209ENST00000519141 MGAT3Q09327 533 aa13.31□□□□□ -0.28
SPIDR-209ENST00000519141 CUL2Q13617 745 aa13.31□□□□□ -0.28
SPIDR-209ENST00000519141 SGSM1Q2NKQ1 1148 aa13.31□□□□□ -0.28
SPIDR-209ENST00000519141 ZNF699Q32M78 642 aa13.31□□□□□ -0.28
SPIDR-209ENST00000519141 SNX27Q96L92 541 aa13.31□□□□□ -0.28
SPIDR-209ENST00000519141 NXF3Q9H4D5 531 aaKnown RBP13.31□□□□□ -0.28
SPIDR-209ENST00000519141 PLEKHA5Q9HAU0 1116 aa13.31□□□□□ -0.28
SPIDR-209ENST00000519141 APOBEC3GQ9HC16 384 aaKnown RBP13.31□□□□□ -0.28
SPIDR-209ENST00000519141 TRMT13Q9NUP7 481 aaKnown RBP13.31□□□□□ -0.28
SPIDR-209ENST00000519141 SNTG2Q9NY99 539 aa13.31□□□□□ -0.28
SPIDR-209ENST00000519141 DNAI1Q9UI46 699 aa13.31□□□□□ -0.28
SPIDR-209ENST00000519141 GUCA1BQ9UMX6 200 aa13.31□□□□□ -0.28
SPIDR-209ENST00000519141 PHF24Q9UPV7 400 aa13.31□□□□□ -0.28
SPIDR-209ENST00000519141 NUB1Q9Y5A7 615 aa13.31□□□□□ -0.28
SPIDR-209ENST00000519141 LAMA3Q16787 3333 aa13.3□□□□□ -0.28
SPIDR-209ENST00000519141 RCCD1A6NED2 376 aa13.3□□□□□ -0.28
SPIDR-209ENST00000519141 CST3P01034 146 aaPredicted RBP13.3□□□□□ -0.28
SPIDR-209ENST00000519141 KRT19P08727 400 aa13.3□□□□□ -0.28
SPIDR-209ENST00000519141 KRT5P13647 590 aa13.3□□□□□ -0.28
SPIDR-209ENST00000519141 MYL6P60660 151 aa13.3□□□□□ -0.28
SPIDR-209ENST00000519141 UBXN11Q5T124 520 aa13.3□□□□□ -0.28
SPIDR-209ENST00000519141 C10orf76Q5T2E6 689 aa13.3□□□□□ -0.28
SPIDR-209ENST00000519141 TWF2Q6IBS0 349 aaKnown RBP13.3□□□□□ -0.28
SPIDR-209ENST00000519141 DHX38Q92620 1227 aaKnown RBP13.3□□□□□ -0.28
SPIDR-209ENST00000519141 TAF4BQ92750 862 aa13.3□□□□□ -0.28
SPIDR-209ENST00000519141 KIF12Q96FN5 646 aa13.3□□□□□ -0.28
SPIDR-209ENST00000519141 ARID3AQ99856 593 aa13.3□□□□□ -0.28
SPIDR-209ENST00000519141 NIF3L1Q9GZT8 377 aa13.3□□□□□ -0.28
SPIDR-209ENST00000519141 LACRTQ9GZZ8 138 aa13.3□□□□□ -0.28
SPIDR-209ENST00000519141 MYO1AQ9UBC5 1043 aa13.3□□□□□ -0.28
SPIDR-209ENST00000519141 TFR2Q9UP52 801 aa13.3□□□□□ -0.28
SPIDR-209ENST00000519141 DERAQ9Y315 318 aa13.3□□□□□ -0.28
SPIDR-209ENST00000519141 R3HCC1Q9Y3T6 440 aaKnown RBP13.3□□□□□ -0.28
SPIDR-209ENST00000519141 DDX3XO00571 662 aaKnown RBP eCLIP13.29□□□□□ -0.28
SPIDR-209ENST00000519141 GPR182O15218 404 aa13.29□□□□□ -0.28
SPIDR-209ENST00000519141 PJA2O43164 708 aa13.29□□□□□ -0.28
SPIDR-209ENST00000519141 CYP26A1O43174 497 aa13.29□□□□□ -0.28
SPIDR-209ENST00000519141 CAND2O75155 1236 aa13.29□□□□□ -0.28
SPIDR-209ENST00000519141 RECQL4O94761 1208 aa13.29□□□□□ -0.28
SPIDR-209ENST00000519141 ITGB3P05106 788 aa13.29□□□□□ -0.28
SPIDR-209ENST00000519141 TNFAIP3P21580 790 aa13.29□□□□□ -0.28
SPIDR-209ENST00000519141 PDE6CP51160 858 aa13.29□□□□□ -0.28
SPIDR-209ENST00000519141 NAB2Q15742 525 aa13.29□□□□□ -0.28
SPIDR-209ENST00000519141 ALKBH5Q6P6C2 394 aaKnown RBP13.29□□□□□ -0.28
SPIDR-209ENST00000519141 GLYCTKQ8IVS8 523 aa13.29□□□□□ -0.28
SPIDR-209ENST00000519141 C1orf127Q8N9H9 656 aa13.29□□□□□ -0.28
SPIDR-209ENST00000519141 LNX1Q8TBB1 728 aaPredicted RBP13.29□□□□□ -0.28
SPIDR-209ENST00000519141 EPS8L1Q8TE68 723 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms