RNA–Protein interactions for RNA: ENST00000518839.1

TRAPPC9-205, Transcript of trafficking protein particle complex 9, humanhuman

TSL 4

Gene TRAPPC9, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-205ENST00000518839 TMEM132DQ14C87 1099 aa16.19■□□□□ 0.18
TRAPPC9-205ENST00000518839 ALKBH5Q6P6C2 394 aaKnown RBP16.19■□□□□ 0.18
TRAPPC9-205ENST00000518839 TMEM192Q8IY95 271 aa16.19■□□□□ 0.18
TRAPPC9-205ENST00000518839 TMEM40Q8WWA1 233 aa16.19■□□□□ 0.18
TRAPPC9-205ENST00000518839 AGPAT1Q99943 283 aa16.19■□□□□ 0.18
TRAPPC9-205ENST00000518839 PI4K2AQ9BTU6 479 aa16.19■□□□□ 0.18
TRAPPC9-205ENST00000518839 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.19■□□□□ 0.18
TRAPPC9-205ENST00000518839 CHST12Q9NRB3 414 aa16.19■□□□□ 0.18
TRAPPC9-205ENST00000518839 NAGPAQ9UK23 515 aa16.19■□□□□ 0.18
TRAPPC9-205ENST00000518839 GUCA1BQ9UMX6 200 aa16.19■□□□□ 0.18
TRAPPC9-205ENST00000518839 GRIN2DO15399 1336 aa16.19■□□□□ 0.18
TRAPPC9-205ENST00000518839 A0A0U1RQG5 324 aaPredicted RBP16.18■□□□□ 0.18
TRAPPC9-205ENST00000518839 BTNL10A8MVZ5 291 aa16.18■□□□□ 0.18
TRAPPC9-205ENST00000518839 KBTBD13C9JR72 458 aa16.18■□□□□ 0.18
TRAPPC9-205ENST00000518839 GPR182O15218 404 aa16.18■□□□□ 0.18
TRAPPC9-205ENST00000518839 RPS6KA5O75582 802 aa16.18■□□□□ 0.18
TRAPPC9-205ENST00000518839 CLSTN1O94985 981 aa16.18■□□□□ 0.18
TRAPPC9-205ENST00000518839 TERF1P54274 439 aa16.18■□□□□ 0.18
TRAPPC9-205ENST00000518839 MGAT3Q09327 533 aa16.18■□□□□ 0.18
TRAPPC9-205ENST00000518839 JADE1Q6IE81 842 aa16.18■□□□□ 0.18
TRAPPC9-205ENST00000518839 FAM228AQ86W67 206 aa16.18■□□□□ 0.18
TRAPPC9-205ENST00000518839 ZNF677Q86XU0 584 aa16.18■□□□□ 0.18
TRAPPC9-205ENST00000518839 GPIHBP1Q8IV16 184 aa16.18■□□□□ 0.18
TRAPPC9-205ENST00000518839 HACE1Q8IYU2 909 aa16.18■□□□□ 0.18
TRAPPC9-205ENST00000518839 RNF10Q8N5U6 811 aaKnown RBP16.18■□□□□ 0.18
TRAPPC9-205ENST00000518839 SLC30A5Q8TAD4 765 aa16.18■□□□□ 0.18
TRAPPC9-205ENST00000518839 KAT5Q92993 513 aa16.18■□□□□ 0.18
TRAPPC9-205ENST00000518839 SYT11Q9BT88 431 aa16.18■□□□□ 0.18
TRAPPC9-205ENST00000518839 SENP6Q9GZR1 1112 aaPredicted RBP16.18■□□□□ 0.18
TRAPPC9-205ENST00000518839 FAM124BQ9H5Z6 455 aaPredicted RBP16.18■□□□□ 0.18
TRAPPC9-205ENST00000518839 ITGA11Q9UKX5 1188 aa16.18■□□□□ 0.18
TRAPPC9-205ENST00000518839 PHF24Q9UPV7 400 aa16.18■□□□□ 0.18
TRAPPC9-205ENST00000518839 PTPN22Q9Y2R2 807 aa16.18■□□□□ 0.18
TRAPPC9-205ENST00000518839 SQORQ9Y6N5 450 aa16.18■□□□□ 0.18
TRAPPC9-205ENST00000518839 XPOTO43592 962 aaKnown RBP16.17■□□□□ 0.18
TRAPPC9-205ENST00000518839 STAU1O95793 577 aaKnown RBP16.17■□□□□ 0.18
TRAPPC9-205ENST00000518839 NFICP08651 508 aa16.17■□□□□ 0.18
TRAPPC9-205ENST00000518839 P4HA1P13674 534 aa16.17■□□□□ 0.18
TRAPPC9-205ENST00000518839 HSPA6P17066 643 aa16.17■□□□□ 0.18
TRAPPC9-205ENST00000518839 ZNF699Q32M78 642 aa16.17■□□□□ 0.18
TRAPPC9-205ENST00000518839 FAM26DQ5JW98 314 aa16.17■□□□□ 0.18
TRAPPC9-205ENST00000518839 ZNF569Q5MCW4 686 aa16.17■□□□□ 0.18
TRAPPC9-205ENST00000518839 USP38Q8NB14 1042 aa16.17■□□□□ 0.18
TRAPPC9-205ENST00000518839 SECISBP2LQ93073 1101 aaKnown RBP16.17■□□□□ 0.18
TRAPPC9-205ENST00000518839 SNX27Q96L92 541 aa16.17■□□□□ 0.18
TRAPPC9-205ENST00000518839 NIF3L1Q9GZT8 377 aa16.17■□□□□ 0.18
TRAPPC9-205ENST00000518839 LACRTQ9GZZ8 138 aa16.17■□□□□ 0.18
TRAPPC9-205ENST00000518839 VRTNQ9H8Y1 702 aa16.17■□□□□ 0.18
TRAPPC9-205ENST00000518839 APOBEC3GQ9HC16 384 aaKnown RBP16.17■□□□□ 0.18
TRAPPC9-205ENST00000518839 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.17■□□□□ 0.18
TRAPPC9-205ENST00000518839 STARD7Q9NQZ5 370 aa16.17■□□□□ 0.18
TRAPPC9-205ENST00000518839 SNTG2Q9NY99 539 aa16.17■□□□□ 0.18
TRAPPC9-205ENST00000518839 NENFQ9UMX5 172 aa16.17■□□□□ 0.18
TRAPPC9-205ENST00000518839 NOC2LQ9Y3T9 749 aaKnown RBP16.17■□□□□ 0.18
TRAPPC9-205ENST00000518839 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.17■□□□□ 0.18
TRAPPC9-205ENST00000518839 A0A0U1RQJ8 604 aa16.16■□□□□ 0.18
TRAPPC9-205ENST00000518839 DDX3XO00571 662 aaKnown RBP eCLIP16.16■□□□□ 0.18
TRAPPC9-205ENST00000518839 CYP26A1O43174 497 aa16.16■□□□□ 0.18
TRAPPC9-205ENST00000518839 TACC1O75410 805 aa16.16■□□□□ 0.18
TRAPPC9-205ENST00000518839 CST3P01034 146 aaPredicted RBP16.16■□□□□ 0.18
TRAPPC9-205ENST00000518839 H2AFZP0C0S5 128 aa16.16■□□□□ 0.18
TRAPPC9-205ENST00000518839 KRT5P13647 590 aa16.16■□□□□ 0.18
TRAPPC9-205ENST00000518839 THPOP40225 353 aa16.16■□□□□ 0.18
TRAPPC9-205ENST00000518839 MYL6P60660 151 aa16.16■□□□□ 0.18
TRAPPC9-205ENST00000518839 RBP5P82980 135 aa16.16■□□□□ 0.18
TRAPPC9-205ENST00000518839 TUBB2AQ13885 445 aa16.16■□□□□ 0.18
TRAPPC9-205ENST00000518839 IFI16Q16666 785 aaKnown RBP16.16■□□□□ 0.18
TRAPPC9-205ENST00000518839 ZNF667Q5HYK9 610 aa16.16■□□□□ 0.18
TRAPPC9-205ENST00000518839 TWF2Q6IBS0 349 aaKnown RBP16.16■□□□□ 0.18
TRAPPC9-205ENST00000518839 H2AFVQ71UI9 128 aa16.16■□□□□ 0.18
TRAPPC9-205ENST00000518839 C1orf127Q8N9H9 656 aa16.16■□□□□ 0.18
TRAPPC9-205ENST00000518839 SLC43A3Q8NBI5 491 aa16.16■□□□□ 0.18
TRAPPC9-205ENST00000518839 BEST2Q8NFU1 509 aa16.16■□□□□ 0.18
TRAPPC9-205ENST00000518839 TRIM58Q8NG06 486 aa16.16■□□□□ 0.18
TRAPPC9-205ENST00000518839 LNX1Q8TBB1 728 aaPredicted RBP16.16■□□□□ 0.18
TRAPPC9-205ENST00000518839 EPS8L1Q8TE68 723 aa16.16■□□□□ 0.18
TRAPPC9-205ENST00000518839 U2AF1L4Q8WU68 220 aaKnown RBP16.16■□□□□ 0.18
TRAPPC9-205ENST00000518839 ATRIPQ8WXE1 791 aa16.16■□□□□ 0.18
TRAPPC9-205ENST00000518839 KIF12Q96FN5 646 aa16.16■□□□□ 0.18
TRAPPC9-205ENST00000518839 ALS2CR12Q96Q35 445 aa16.16■□□□□ 0.18
TRAPPC9-205ENST00000518839 TUBB2BQ9BVA1 445 aa16.16■□□□□ 0.18
TRAPPC9-205ENST00000518839 EIF2AQ9BY44 585 aaKnown RBP16.16■□□□□ 0.18
TRAPPC9-205ENST00000518839 CNTN3Q9P232 1028 aa16.16■□□□□ 0.18
TRAPPC9-205ENST00000518839 CNTN6Q9UQ52 1028 aa16.16■□□□□ 0.18
TRAPPC9-205ENST00000518839 NUB1Q9Y5A7 615 aa16.16■□□□□ 0.18
TRAPPC9-205ENST00000518839 PCDHB4Q9Y5E5 795 aa16.16■□□□□ 0.18
TRAPPC9-205ENST00000518839 PCDHB2Q9Y5E7 798 aa16.16■□□□□ 0.18
TRAPPC9-205ENST00000518839 A0A1W2PQ45 241 aaPredicted RBP16.15■□□□□ 0.18
TRAPPC9-205ENST00000518839 A0A1W2PQY0 241 aa16.15■□□□□ 0.18
TRAPPC9-205ENST00000518839 CTAGE9A4FU28 777 aa16.15■□□□□ 0.18
TRAPPC9-205ENST00000518839 RCCD1A6NED2 376 aa16.15■□□□□ 0.18
TRAPPC9-205ENST00000518839 DNM1LO00429 736 aa16.15■□□□□ 0.18
TRAPPC9-205ENST00000518839 SGPL1O95470 568 aa16.15■□□□□ 0.18
TRAPPC9-205ENST00000518839 CHRNA1P02708 482 aa16.15■□□□□ 0.18
TRAPPC9-205ENST00000518839 KRT19P08727 400 aa16.15■□□□□ 0.18
TRAPPC9-205ENST00000518839 GZMAP12544 262 aa16.15■□□□□ 0.18
TRAPPC9-205ENST00000518839 CYP11B1P15538 503 aa16.15■□□□□ 0.18
TRAPPC9-205ENST00000518839 CDR2Q01850 454 aa16.15■□□□□ 0.18
TRAPPC9-205ENST00000518839 UBXN11Q5T124 520 aa16.15■□□□□ 0.18
TRAPPC9-205ENST00000518839 SPOPLQ6IQ16 392 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms