RNA–Protein interactions for RNA: ENST00000517862.1

CPNE3-204, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 654 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-204ENST00000517862 GALNT11Q8NCW6 608 aa4.01□□□□□ -1.77
CPNE3-204ENST00000517862 CHAC2Q8WUX2 184 aa4.01□□□□□ -1.77
CPNE3-204ENST00000517862 PPP1R14AQ96A00 147 aa4.01□□□□□ -1.77
CPNE3-204ENST00000517862 CLUHP3Q96NS8 147 aa4.01□□□□□ -1.77
CPNE3-204ENST00000517862 PHAXQ9H814 394 aaKnown RBP4.01□□□□□ -1.77
CPNE3-204ENST00000517862 NCOA5Q9HCD5 579 aaKnown RBP4.01□□□□□ -1.77
CPNE3-204ENST00000517862 ARHGEF4Q9NR80 690 aa4.01□□□□□ -1.77
CPNE3-204ENST00000517862 VPS45Q9NRW7 570 aa4.01□□□□□ -1.77
CPNE3-204ENST00000517862 DBR1Q9UK59 544 aaKnown RBP4.01□□□□□ -1.77
CPNE3-204ENST00000517862 MINPP1Q9UNW1 487 aa4.01□□□□□ -1.77
CPNE3-204ENST00000517862 CNPY2Q9Y2B0 182 aa4.01□□□□□ -1.77
CPNE3-204ENST00000517862 ATP8A1Q9Y2Q0 1164 aa4.01□□□□□ -1.77
CPNE3-204ENST00000517862 RWDD3Q9Y3V2 267 aa4.01□□□□□ -1.77
CPNE3-204ENST00000517862 SLC12A7Q9Y666 1083 aa4.01□□□□□ -1.77
CPNE3-204ENST00000517862 A0A1W2PQU0 124 aa4□□□□□ -1.77
CPNE3-204ENST00000517862 KANSL1LA0AUZ9 987 aa4□□□□□ -1.77
CPNE3-204ENST00000517862 FAM170BA6NMN3 283 aa4□□□□□ -1.77
CPNE3-204ENST00000517862 RRP8O43159 456 aaKnown RBP4□□□□□ -1.77
CPNE3-204ENST00000517862 TBX1O43435 398 aa4□□□□□ -1.77
CPNE3-204ENST00000517862 EIF5BO60841 1220 aaKnown RBP4□□□□□ -1.77
CPNE3-204ENST00000517862 PEX14O75381 377 aa4□□□□□ -1.77
CPNE3-204ENST00000517862 DLGAP3O95886 979 aa4□□□□□ -1.77
CPNE3-204ENST00000517862 EOMESO95936 686 aa4□□□□□ -1.77
CPNE3-204ENST00000517862 CYP11A1P05108 521 aa4□□□□□ -1.77
CPNE3-204ENST00000517862 CELA3BP08861 270 aa4□□□□□ -1.77
CPNE3-204ENST00000517862 WEE2P0C1S8 567 aa4□□□□□ -1.77
CPNE3-204ENST00000517862 TDGF1P13385 188 aa4□□□□□ -1.77
CPNE3-204ENST00000517862 SDSP20132 328 aa4□□□□□ -1.77
CPNE3-204ENST00000517862 DNAJB1P25685 340 aa4□□□□□ -1.77
CPNE3-204ENST00000517862 CNR2P34972 360 aa4□□□□□ -1.77
CPNE3-204ENST00000517862 MPLP40238 635 aa4□□□□□ -1.77
CPNE3-204ENST00000517862 MTHFRP42898 656 aa4□□□□□ -1.77
CPNE3-204ENST00000517862 GJA9P57773 515 aa4□□□□□ -1.77
CPNE3-204ENST00000517862 STARD6P59095 220 aa4□□□□□ -1.77
CPNE3-204ENST00000517862 PSMC6P62333 389 aa4□□□□□ -1.77
CPNE3-204ENST00000517862 ETF1P62495 437 aaKnown RBP4□□□□□ -1.77
CPNE3-204ENST00000517862 BEX3Q00994 111 aa4□□□□□ -1.77
CPNE3-204ENST00000517862 BFSP2Q13515 415 aa4□□□□□ -1.77
CPNE3-204ENST00000517862 KCNC3Q14003 757 aa4□□□□□ -1.77
CPNE3-204ENST00000517862 UBE4AQ14139 1066 aa4□□□□□ -1.77
CPNE3-204ENST00000517862 KCNMB1Q16558 191 aa4□□□□□ -1.77
CPNE3-204ENST00000517862 TCTN1Q2MV58 587 aa4□□□□□ -1.77
CPNE3-204ENST00000517862 HSP90AB3PQ58FF7 597 aa4□□□□□ -1.77
CPNE3-204ENST00000517862 CDCP2Q5VXM1 449 aa4□□□□□ -1.77
CPNE3-204ENST00000517862 CYFIP1Q7L576 1253 aa4□□□□□ -1.77
CPNE3-204ENST00000517862 CXXC5Q7LFL8 322 aaKnown RBP4□□□□□ -1.77
CPNE3-204ENST00000517862 UBE3DQ7Z6J8 389 aa4□□□□□ -1.77
CPNE3-204ENST00000517862 LRRC47Q8N1G4 583 aaKnown RBP4□□□□□ -1.77
CPNE3-204ENST00000517862 FIBCD1Q8N539 461 aa4□□□□□ -1.77
CPNE3-204ENST00000517862 FAM13CQ8NE31 585 aa4□□□□□ -1.77
CPNE3-204ENST00000517862 IL17REQ8NFR9 667 aa4□□□□□ -1.77
CPNE3-204ENST00000517862 CXorf38Q8TB03 319 aa4□□□□□ -1.77
CPNE3-204ENST00000517862 BCL7CQ8WUZ0 217 aaPredicted RBP4□□□□□ -1.77
CPNE3-204ENST00000517862 TSR2Q969E8 191 aaKnown RBP4□□□□□ -1.77
CPNE3-204ENST00000517862 ZNF669Q96BR6 464 aaPredicted RBP4□□□□□ -1.77
CPNE3-204ENST00000517862 KLHDC7BQ96G42 594 aa4□□□□□ -1.77
CPNE3-204ENST00000517862 ZNF512BQ96KM6 892 aaPredicted RBP4□□□□□ -1.77
CPNE3-204ENST00000517862 FGD4Q96M96 766 aa4□□□□□ -1.77
CPNE3-204ENST00000517862 SLC6A18Q96N87 628 aa4□□□□□ -1.77
CPNE3-204ENST00000517862 CDC6Q99741 560 aa4□□□□□ -1.77
CPNE3-204ENST00000517862 TARS2Q9BW92 718 aaKnown RBP4□□□□□ -1.77
CPNE3-204ENST00000517862 ADAM7Q9H2U9 754 aa4□□□□□ -1.77
CPNE3-204ENST00000517862 SOX17Q9H6I2 414 aaPredicted RBP4□□□□□ -1.77
CPNE3-204ENST00000517862 TMEM9BQ9NQ34 198 aa4□□□□□ -1.77
CPNE3-204ENST00000517862 IGSF9Q9P2J2 1179 aa4□□□□□ -1.77
CPNE3-204ENST00000517862 DKK3Q9UBP4 350 aa4□□□□□ -1.77
CPNE3-204ENST00000517862 APEX2Q9UBZ4 518 aa4□□□□□ -1.77
CPNE3-204ENST00000517862 ZNF214Q9UL59 606 aaPredicted RBP4□□□□□ -1.77
CPNE3-204ENST00000517862 PLAGL2Q9UPG8 496 aa4□□□□□ -1.77
CPNE3-204ENST00000517862 ZNF281Q9Y2X9 895 aa4□□□□□ -1.77
CPNE3-204ENST00000517862 MRPS23Q9Y3D9 190 aaKnown RBP4□□□□□ -1.77
CPNE3-204ENST00000517862 MTF2Q9Y483 593 aaPredicted RBP4□□□□□ -1.77
CPNE3-204ENST00000517862 IL16Q14005 1332 aa3.99□□□□□ -1.77
CPNE3-204ENST00000517862 TRABD2BA6NFA1 517 aa3.99□□□□□ -1.77
CPNE3-204ENST00000517862 C9IYK1 514 aa3.99□□□□□ -1.77
CPNE3-204ENST00000517862 ADAM11O75078 769 aa3.99□□□□□ -1.77
CPNE3-204ENST00000517862 EPN2O95208 641 aa3.99□□□□□ -1.77
CPNE3-204ENST00000517862 EPHX1P07099 455 aa3.99□□□□□ -1.77
CPNE3-204ENST00000517862 RNASE1P07998 156 aaKnown RBP3.99□□□□□ -1.77
CPNE3-204ENST00000517862 MMP3P08254 477 aa3.99□□□□□ -1.77
CPNE3-204ENST00000517862 CCNFP41002 786 aa3.99□□□□□ -1.77
CPNE3-204ENST00000517862 GRIA2P42262 883 aa3.99□□□□□ -1.77
CPNE3-204ENST00000517862 KCNJ4P48050 445 aa3.99□□□□□ -1.77
CPNE3-204ENST00000517862 TLE1Q04724 770 aa3.99□□□□□ -1.77
CPNE3-204ENST00000517862 ITIH3Q06033 890 aa3.99□□□□□ -1.77
CPNE3-204ENST00000517862 PDE4BQ07343 736 aa3.99□□□□□ -1.77
CPNE3-204ENST00000517862 MTAPQ13126 283 aa3.99□□□□□ -1.77
CPNE3-204ENST00000517862 NOLC1Q14978 699 aaKnown RBP eCLIP3.99□□□□□ -1.77
CPNE3-204ENST00000517862 NONOQ15233 471 aaKnown RBP eCLIP3.99□□□□□ -1.77
CPNE3-204ENST00000517862 TMEM201Q5SNT2 666 aa3.99□□□□□ -1.77
CPNE3-204ENST00000517862 SCARA3Q6AZY7 606 aa3.99□□□□□ -1.77
CPNE3-204ENST00000517862 TMEM184AQ6ZMB5 413 aa3.99□□□□□ -1.77
CPNE3-204ENST00000517862 COPS6Q7L5N1 327 aa3.99□□□□□ -1.77
CPNE3-204ENST00000517862 STRA8Q7Z7C7 330 aa3.99□□□□□ -1.77
CPNE3-204ENST00000517862 WDR75Q8IWA0 830 aaKnown RBP3.99□□□□□ -1.77
CPNE3-204ENST00000517862 CCDC146Q8IYE0 955 aa3.99□□□□□ -1.77
CPNE3-204ENST00000517862 PHACTR4Q8IZ21 702 aa3.99□□□□□ -1.77
CPNE3-204ENST00000517862 SYNPOQ8N3V7 929 aa3.99□□□□□ -1.77
CPNE3-204ENST00000517862 UBASH3BQ8TF42 649 aa3.99□□□□□ -1.77
CPNE3-204ENST00000517862 RSAD2Q8WXG1 361 aa3.99□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms