RNA–Protein interactions for RNA: ENST00000517490.5

CPNE3-203, Transcript of copine 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE3, Length 4,865 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-203ENST00000517490 HAUS6Q7Z4H7 955 aa7.04□□□□□ -1.28
CPNE3-203ENST00000517490 RASSF3Q86WH2 238 aa7.04□□□□□ -1.28
CPNE3-203ENST00000517490 SLC20A1Q8WUM9 679 aa7.04□□□□□ -1.28
CPNE3-203ENST00000517490 NGLY1Q96IV0 654 aa7.04□□□□□ -1.28
CPNE3-203ENST00000517490 TIPINQ9BVW5 301 aa7.04□□□□□ -1.28
CPNE3-203ENST00000517490 COA1Q9GZY4 146 aa7.04□□□□□ -1.28
CPNE3-203ENST00000517490 CCDC134Q9H6E4 229 aa7.04□□□□□ -1.28
CPNE3-203ENST00000517490 PARVAQ9NVD7 372 aa7.04□□□□□ -1.28
CPNE3-203ENST00000517490 PNMA3Q9UL41 463 aa7.04□□□□□ -1.28
CPNE3-203ENST00000517490 ARFGEF2Q9Y6D5 1785 aa7.04□□□□□ -1.28
CPNE3-203ENST00000517490 SMAPO00193 183 aa7.04□□□□□ -1.28
CPNE3-203ENST00000517490 PSTPIP1O43586 416 aa7.04□□□□□ -1.28
CPNE3-203ENST00000517490 RALAP11233 206 aa7.04□□□□□ -1.28
CPNE3-203ENST00000517490 PEX5P50542 639 aa7.04□□□□□ -1.28
CPNE3-203ENST00000517490 SNX16P57768 344 aa7.04□□□□□ -1.28
CPNE3-203ENST00000517490 ROR2Q01974 943 aaKnown RBP7.04□□□□□ -1.28
CPNE3-203ENST00000517490 DEUP1Q05D60 604 aa7.04□□□□□ -1.28
CPNE3-203ENST00000517490 MKRN4PQ13434 485 aaPredicted RBP7.04□□□□□ -1.28
CPNE3-203ENST00000517490 MED21Q13503 144 aa7.04□□□□□ -1.28
CPNE3-203ENST00000517490 CCNG2Q16589 344 aa7.04□□□□□ -1.28
CPNE3-203ENST00000517490 DARS2Q6PI48 645 aaKnown RBP7.04□□□□□ -1.28
CPNE3-203ENST00000517490 DPH6Q7L8W6 267 aa7.04□□□□□ -1.28
CPNE3-203ENST00000517490 ZNF677Q86XU0 584 aa7.04□□□□□ -1.28
CPNE3-203ENST00000517490 CDAN1Q8IWY9 1227 aa7.04□□□□□ -1.28
CPNE3-203ENST00000517490 SERPINI1Q99574 410 aa7.04□□□□□ -1.28
CPNE3-203ENST00000517490 TMEM117Q9H0C3 514 aa7.04□□□□□ -1.28
CPNE3-203ENST00000517490 XPO5Q9HAV4 1204 aaKnown RBP eCLIP7.04□□□□□ -1.28
CPNE3-203ENST00000517490 CHORDC1Q9UHD1 332 aaPredicted RBP7.04□□□□□ -1.28
CPNE3-203ENST00000517490 APOBEC2Q9Y235 224 aaKnown RBP7.04□□□□□ -1.28
CPNE3-203ENST00000517490 SUGT1Q9Y2Z0 365 aa7.04□□□□□ -1.28
CPNE3-203ENST00000517490 SLC16A4O15374 487 aa7.04□□□□□ -1.28
CPNE3-203ENST00000517490 TOM1L1O75674 476 aa7.04□□□□□ -1.28
CPNE3-203ENST00000517490 SGPL1O95470 568 aa7.04□□□□□ -1.28
CPNE3-203ENST00000517490 CD58P19256 250 aa7.04□□□□□ -1.28
CPNE3-203ENST00000517490 SLC34A1Q06495 639 aa7.04□□□□□ -1.28
CPNE3-203ENST00000517490 ZYXQ15942 572 aaKnown RBP7.04□□□□□ -1.28
CPNE3-203ENST00000517490 MTDHQ86UE4 582 aaKnown RBP7.04□□□□□ -1.28
CPNE3-203ENST00000517490 SPICE1Q8N0Z3 855 aa7.04□□□□□ -1.28
CPNE3-203ENST00000517490 ATG4AQ8WYN0 398 aa7.04□□□□□ -1.28
CPNE3-203ENST00000517490 HAS1Q92839 578 aa7.04□□□□□ -1.28
CPNE3-203ENST00000517490 CNKSR1Q969H4 720 aa7.04□□□□□ -1.28
CPNE3-203ENST00000517490 FAM192AQ9GZU8 254 aa7.04□□□□□ -1.28
CPNE3-203ENST00000517490 DNAJC18Q9H819 358 aa7.04□□□□□ -1.28
CPNE3-203ENST00000517490 HEY2Q9UBP5 337 aa7.04□□□□□ -1.28
CPNE3-203ENST00000517490 G3BP2Q9UN86 482 aaKnown RBP7.04□□□□□ -1.28
CPNE3-203ENST00000517490 MAD1L1Q9Y6D9 718 aa7.04□□□□□ -1.28
CPNE3-203ENST00000517490 B2RBV5 119 aa7.04□□□□□ -1.28
CPNE3-203ENST00000517490 F5H6K3 240 aa7.04□□□□□ -1.28
CPNE3-203ENST00000517490 M0R2N6 131 aa7.04□□□□□ -1.28
CPNE3-203ENST00000517490 MSH4O15457 936 aa7.04□□□□□ -1.28
CPNE3-203ENST00000517490 ATP9AO75110 1047 aa7.04□□□□□ -1.28
CPNE3-203ENST00000517490 GDF11O95390 407 aa7.04□□□□□ -1.28
CPNE3-203ENST00000517490 VCAM1P19320 739 aa7.04□□□□□ -1.28
CPNE3-203ENST00000517490 EPHB2P29323 1055 aa7.04□□□□□ -1.28
CPNE3-203ENST00000517490 CCNHP51946 323 aaPredicted RBP7.04□□□□□ -1.28
CPNE3-203ENST00000517490 THOC5Q13769 683 aaKnown RBP7.04□□□□□ -1.28
CPNE3-203ENST00000517490 HIC1Q14526 733 aa7.04□□□□□ -1.28
CPNE3-203ENST00000517490 SLC45A4Q5BKX6 768 aa7.04□□□□□ -1.28
CPNE3-203ENST00000517490 SNX30Q5VWJ9 437 aa7.04□□□□□ -1.28
CPNE3-203ENST00000517490 ANO5Q75V66 913 aa7.04□□□□□ -1.28
CPNE3-203ENST00000517490 ANKMY2Q8IV38 441 aa7.04□□□□□ -1.28
CPNE3-203ENST00000517490 KCTD6Q8NC69 237 aa7.04□□□□□ -1.28
CPNE3-203ENST00000517490 RBM46Q8TBY0 533 aaKnown RBP7.04□□□□□ -1.28
CPNE3-203ENST00000517490 KRT35Q92764 455 aa7.04□□□□□ -1.28
CPNE3-203ENST00000517490 ATP6V0A1Q93050 837 aa7.04□□□□□ -1.28
CPNE3-203ENST00000517490 CFAP36Q96G28 342 aa7.04□□□□□ -1.28
CPNE3-203ENST00000517490 BTBD6Q96KE9 485 aa7.04□□□□□ -1.28
CPNE3-203ENST00000517490 ZNF317Q96PQ6 595 aaPredicted RBP7.04□□□□□ -1.28
CPNE3-203ENST00000517490 TMEM237Q96Q45 408 aa7.04□□□□□ -1.28
CPNE3-203ENST00000517490 DCLK3Q9C098 648 aa7.04□□□□□ -1.28
CPNE3-203ENST00000517490 LRRC19Q9H756 370 aa7.04□□□□□ -1.28
CPNE3-203ENST00000517490 NYAP2Q9P242 653 aa7.04□□□□□ -1.28
CPNE3-203ENST00000517490 DAGLAQ9Y4D2 1042 aa7.04□□□□□ -1.28
CPNE3-203ENST00000517490 PECAM1P16284 738 aaPredicted RBP7.03□□□□□ -1.28
CPNE3-203ENST00000517490 KRT4P19013 534 aa7.03□□□□□ -1.28
CPNE3-203ENST00000517490 CDC25CP30307 473 aa7.03□□□□□ -1.28
CPNE3-203ENST00000517490 GARSP41250 739 aaKnown RBP7.03□□□□□ -1.28
CPNE3-203ENST00000517490 CACNA2D1P54289 1103 aa7.03□□□□□ -1.28
CPNE3-203ENST00000517490 PSMC6P62333 389 aa7.03□□□□□ -1.28
CPNE3-203ENST00000517490 DSG1Q02413 1049 aa7.03□□□□□ -1.28
CPNE3-203ENST00000517490 TAP1Q03518 808 aa7.03□□□□□ -1.28
CPNE3-203ENST00000517490 LAMB3Q13751 1172 aa7.03□□□□□ -1.28
CPNE3-203ENST00000517490 TBCCQ15814 346 aa7.03□□□□□ -1.28
CPNE3-203ENST00000517490 DBN1Q16643 649 aa7.03□□□□□ -1.28
CPNE3-203ENST00000517490 BMT2Q1RMZ1 405 aa7.03□□□□□ -1.28
CPNE3-203ENST00000517490 TBC1D10BQ4KMP7 808 aaPredicted RBP7.03□□□□□ -1.28
CPNE3-203ENST00000517490 ANKRD20A4Q4UJ75 823 aa7.03□□□□□ -1.28
CPNE3-203ENST00000517490 CEP55Q53EZ4 464 aa7.03□□□□□ -1.28
CPNE3-203ENST00000517490 RGS9BPQ6ZS82 235 aa7.03□□□□□ -1.28
CPNE3-203ENST00000517490 ZNF720Q7Z2F6 126 aa7.03□□□□□ -1.28
CPNE3-203ENST00000517490 RHPN2Q8IUC4 686 aa7.03□□□□□ -1.28
CPNE3-203ENST00000517490 TMEM35BQ8NCS4 154 aa7.03□□□□□ -1.28
CPNE3-203ENST00000517490 MTBPQ96DY7 904 aa7.03□□□□□ -1.28
CPNE3-203ENST00000517490 TRAPPC9Q96Q05 1148 aa7.03□□□□□ -1.28
CPNE3-203ENST00000517490 BTBD10Q9BSF8 475 aa7.03□□□□□ -1.28
CPNE3-203ENST00000517490 RTFDC1Q9BY42 306 aaPredicted RBP7.03□□□□□ -1.28
CPNE3-203ENST00000517490 LRMDAQ9H2I8 198 aa7.03□□□□□ -1.28
CPNE3-203ENST00000517490 TMEM8AQ9HCN3 771 aa7.03□□□□□ -1.28
CPNE3-203ENST00000517490 CCPG1Q9ULG6 757 aa7.03□□□□□ -1.28
CPNE3-203ENST00000517490 STXBP5LQ9Y2K9 1186 aa7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 105.3 ms