RNA–Protein interactions for RNA: ENST00000516842.1

RNU6-557P-201, Transcript of RNA, U6 small nuclear 557, pseudogene, humanhuman

BASIC

Gene RNU6-557P, Length 110 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-557P-201ENST00000516842 PROM1O43490 865 aa0.63□□□□□ -2.31
RNU6-557P-201ENST00000516842 ERN1O75460 977 aaKnown RBP0.63□□□□□ -2.31
RNU6-557P-201ENST00000516842 FSBPO95073 299 aa0.63□□□□□ -2.31
RNU6-557P-201ENST00000516842 LY86O95711 162 aa0.63□□□□□ -2.31
RNU6-557P-201ENST00000516842 TTLL1O95922 423 aa0.63□□□□□ -2.31
RNU6-557P-201ENST00000516842 ZNF16P17020 682 aaPredicted RBP0.63□□□□□ -2.31
RNU6-557P-201ENST00000516842 SLC6A2P23975 617 aa0.63□□□□□ -2.31
RNU6-557P-201ENST00000516842 IL1R2P27930 398 aa0.63□□□□□ -2.31
RNU6-557P-201ENST00000516842 SDHAP31040 664 aa0.63□□□□□ -2.31
RNU6-557P-201ENST00000516842 COMPP49747 757 aaPredicted RBP0.63□□□□□ -2.31
RNU6-557P-201ENST00000516842 VEGFCP49767 419 aa0.63□□□□□ -2.31
RNU6-557P-201ENST00000516842 CSRP3P50461 194 aa0.63□□□□□ -2.31
RNU6-557P-201ENST00000516842 HNRNPMP52272 730 aaKnown RBP eCLIP0.63□□□□□ -2.31
RNU6-557P-201ENST00000516842 GAS1P54826 345 aa0.63□□□□□ -2.31
RNU6-557P-201ENST00000516842 RAP2BP61225 183 aa0.63□□□□□ -2.31
RNU6-557P-201ENST00000516842 ROM1Q03395 351 aa0.63□□□□□ -2.31
RNU6-557P-201ENST00000516842 PAK1Q13153 545 aa0.63□□□□□ -2.31
RNU6-557P-201ENST00000516842 PTPRRQ15256 657 aa0.63□□□□□ -2.31
RNU6-557P-201ENST00000516842 NBPF8Q3BBV2 869 aa0.63□□□□□ -2.31
RNU6-557P-201ENST00000516842 PRAMEF9Q5VWM5 478 aa0.63□□□□□ -2.31
RNU6-557P-201ENST00000516842 STYK1Q6J9G0 422 aa0.63□□□□□ -2.31
RNU6-557P-201ENST00000516842 C6orf15Q6UXA7 325 aaPredicted RBP0.63□□□□□ -2.31
RNU6-557P-201ENST00000516842 UNQ6494/PRO21346Q6UXR6 183 aa0.63□□□□□ -2.31
RNU6-557P-201ENST00000516842 PIM3Q86V86 326 aa0.63□□□□□ -2.31
RNU6-557P-201ENST00000516842 ZFP28Q8NHY6 868 aa0.63□□□□□ -2.31
RNU6-557P-201ENST00000516842 DLG3Q92796 817 aa0.63□□□□□ -2.31
RNU6-557P-201ENST00000516842 FUBP3Q96I24 572 aaKnown RBP eCLIP0.63□□□□□ -2.31
RNU6-557P-201ENST00000516842 LCE3DQ9BYE3 92 aa0.63□□□□□ -2.31
RNU6-557P-201ENST00000516842 MRS2Q9HD23 443 aa0.63□□□□□ -2.31
RNU6-557P-201ENST00000516842 HSFX1Q9UBD0 423 aa0.63□□□□□ -2.31
RNU6-557P-201ENST00000516842 SCAF8Q9UPN6 1271 aaKnown RBP0.63□□□□□ -2.31
RNU6-557P-201ENST00000516842 GNEQ9Y223 722 aaKnown RBP0.63□□□□□ -2.31
RNU6-557P-201ENST00000516842 PCDHA8Q9Y5H6 950 aa0.63□□□□□ -2.31
RNU6-557P-201ENST00000516842 A0A0B4J293 547 aa0.62□□□□□ -2.31
RNU6-557P-201ENST00000516842 WDR27A2RRH5 827 aa0.62□□□□□ -2.31
RNU6-557P-201ENST00000516842 CCDC66A2RUB6 948 aa0.62□□□□□ -2.31
RNU6-557P-201ENST00000516842 JTBO76095 146 aa0.62□□□□□ -2.31
RNU6-557P-201ENST00000516842 PAK4O96013 591 aaPredicted RBP0.62□□□□□ -2.31
RNU6-557P-201ENST00000516842 RHOP08100 348 aa0.62□□□□□ -2.31
RNU6-557P-201ENST00000516842 SRGNP10124 158 aa0.62□□□□□ -2.31
RNU6-557P-201ENST00000516842 NR2F6P10588 404 aa0.62□□□□□ -2.31
RNU6-557P-201ENST00000516842 HOXA11P31270 313 aaPredicted RBP0.62□□□□□ -2.31
RNU6-557P-201ENST00000516842 CASP7P55210 303 aa0.62□□□□□ -2.31
RNU6-557P-201ENST00000516842 RBM39Q14498 530 aaKnown RBP0.62□□□□□ -2.31
RNU6-557P-201ENST00000516842 MYBPC3Q14896 1274 aa0.62□□□□□ -2.31
RNU6-557P-201ENST00000516842 NCAPHQ15003 741 aa0.62□□□□□ -2.31
RNU6-557P-201ENST00000516842 CRY1Q16526 586 aa0.62□□□□□ -2.31
RNU6-557P-201ENST00000516842 ZNF772Q68DY9 489 aaPredicted RBP0.62□□□□□ -2.31
RNU6-557P-201ENST00000516842 FOXR2Q6PJQ5 311 aa0.62□□□□□ -2.31
RNU6-557P-201ENST00000516842 C16orf59Q7L2K0 433 aa0.62□□□□□ -2.31
RNU6-557P-201ENST00000516842 RBM23Q86U06 439 aaKnown RBP0.62□□□□□ -2.31
RNU6-557P-201ENST00000516842 DNAJC5GQ8N7S2 189 aa0.62□□□□□ -2.31
RNU6-557P-201ENST00000516842 TMEM125Q96AQ2 219 aa0.62□□□□□ -2.31
RNU6-557P-201ENST00000516842 MARS2Q96GW9 593 aaKnown RBP0.62□□□□□ -2.31
RNU6-557P-201ENST00000516842 MED30Q96HR3 178 aa0.62□□□□□ -2.31
RNU6-557P-201ENST00000516842 MAML3Q96JK9 1138 aa0.62□□□□□ -2.31
RNU6-557P-201ENST00000516842 EXOC2Q96KP1 924 aa0.62□□□□□ -2.31
RNU6-557P-201ENST00000516842 ZFYVE21Q9BQ24 234 aa0.62□□□□□ -2.31
RNU6-557P-201ENST00000516842 OSBPL6Q9BZF3 934 aa0.62□□□□□ -2.31
RNU6-557P-201ENST00000516842 SENP6Q9GZR1 1112 aaPredicted RBP0.62□□□□□ -2.31
RNU6-557P-201ENST00000516842 MTG2Q9H4K7 406 aa0.62□□□□□ -2.31
RNU6-557P-201ENST00000516842 CDCP1Q9H5V8 836 aa0.62□□□□□ -2.31
RNU6-557P-201ENST00000516842 PRO0461Q9UI25 63 aa0.62□□□□□ -2.31
RNU6-557P-201ENST00000516842 SIK3Q9Y2K2 1263 aa0.62□□□□□ -2.31
RNU6-557P-201ENST00000516842 PCDHB6Q9Y5E3 794 aa0.62□□□□□ -2.31
RNU6-557P-201ENST00000516842 TNPO3Q9Y5L0 923 aaKnown RBP0.62□□□□□ -2.31
RNU6-557P-201ENST00000516842 B3GALT1Q9Y5Z6 326 aa0.62□□□□□ -2.31
RNU6-557P-201ENST00000516842 A0A0A6YYJ9 748 aa0.61□□□□□ -2.31
RNU6-557P-201ENST00000516842 A0A1W2PQU0 124 aa0.61□□□□□ -2.31
RNU6-557P-201ENST00000516842 PRODHO43272 600 aa0.61□□□□□ -2.31
RNU6-557P-201ENST00000516842 LDB3O75112 727 aa0.61□□□□□ -2.31
RNU6-557P-201ENST00000516842 URI1O94763 535 aaPredicted RBP0.61□□□□□ -2.31
RNU6-557P-201ENST00000516842 PAPSS2O95340 614 aaPredicted RBP0.61□□□□□ -2.31
RNU6-557P-201ENST00000516842 GSPT1P15170 499 aaKnown RBP0.61□□□□□ -2.31
RNU6-557P-201ENST00000516842 CD19P15391 556 aa0.61□□□□□ -2.31
RNU6-557P-201ENST00000516842 KEAP1Q14145 624 aa0.61□□□□□ -2.31
RNU6-557P-201ENST00000516842 TPRNQ4KMQ1 711 aa0.61□□□□□ -2.31
RNU6-557P-201ENST00000516842 MRM1Q6IN84 353 aaKnown RBP0.61□□□□□ -2.31
RNU6-557P-201ENST00000516842 CEP85Q6P2H3 762 aa0.61□□□□□ -2.31
RNU6-557P-201ENST00000516842 MEX3BQ6ZN04 569 aaKnown RBP0.61□□□□□ -2.31
RNU6-557P-201ENST00000516842 SPATA2LQ8IUW3 424 aaPredicted RBP0.61□□□□□ -2.31
RNU6-557P-201ENST00000516842 UNC5BQ8IZJ1 945 aa0.61□□□□□ -2.31
RNU6-557P-201ENST00000516842 Q8NA96 180 aa0.61□□□□□ -2.31
RNU6-557P-201ENST00000516842 OSBP2Q969R2 916 aa0.61□□□□□ -2.31
RNU6-557P-201ENST00000516842 ASB2Q96Q27 587 aa0.61□□□□□ -2.31
RNU6-557P-201ENST00000516842 CDC5LQ99459 802 aaKnown RBP0.61□□□□□ -2.31
RNU6-557P-201ENST00000516842 MACROD1Q9BQ69 325 aa0.61□□□□□ -2.31
RNU6-557P-201ENST00000516842 NOL10Q9BSC4 688 aaKnown RBP0.61□□□□□ -2.31
RNU6-557P-201ENST00000516842 RMI1Q9H9A7 625 aa0.61□□□□□ -2.31
RNU6-557P-201ENST00000516842 ZBTB40Q9NUA8 1239 aa0.61□□□□□ -2.31
RNU6-557P-201ENST00000516842 TMEM184CQ9NVA4 438 aa0.61□□□□□ -2.31
RNU6-557P-201ENST00000516842 PCDHGB7Q9Y5F8 929 aa0.61□□□□□ -2.31
RNU6-557P-201ENST00000516842 CXorf49A8MYA2 514 aaPredicted RBP0.6□□□□□ -2.31
RNU6-557P-201ENST00000516842 JUPP14923 745 aa0.6□□□□□ -2.31
RNU6-557P-201ENST00000516842 PPP3CBP16298 524 aa0.6□□□□□ -2.31
RNU6-557P-201ENST00000516842 GM2AP17900 193 aa0.6□□□□□ -2.31
RNU6-557P-201ENST00000516842 CANXP27824 592 aaKnown RBP0.6□□□□□ -2.31
RNU6-557P-201ENST00000516842 ME1P48163 572 aa0.6□□□□□ -2.31
RNU6-557P-201ENST00000516842 CLRN1P58418 232 aa0.6□□□□□ -2.31
RNU6-557P-201ENST00000516842 LACTBP83111 547 aaPredicted RBP0.6□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms