RNA–Protein interactions for RNA: ENST00000515385.1

SMAD1-215, Transcript of SMAD family member 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SMAD1, Length 2,085 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-215ENST00000515385 CYLC2Q14093 348 aaPredicted RBP13.58□□□□□ -0.24
SMAD1-215ENST00000515385 NFIL3Q16649 462 aa13.58□□□□□ -0.24
SMAD1-215ENST00000515385 LARP7Q4G0J3 582 aaKnown RBP eCLIP13.58□□□□□ -0.24
SMAD1-215ENST00000515385 MFSD4BQ5TF39 518 aa13.58□□□□□ -0.24
SMAD1-215ENST00000515385 TMCO4Q5TGY1 634 aa13.58□□□□□ -0.24
SMAD1-215ENST00000515385 AAGABQ6PD74 315 aa13.58□□□□□ -0.24
SMAD1-215ENST00000515385 B3GNT6Q6ZMB0 384 aa13.58□□□□□ -0.24
SMAD1-215ENST00000515385 SPOCK2Q92563 424 aa13.58□□□□□ -0.24
SMAD1-215ENST00000515385 DYDC2Q96IM9 177 aa13.58□□□□□ -0.24
SMAD1-215ENST00000515385 MPP4Q96JB8 637 aa13.58□□□□□ -0.24
SMAD1-215ENST00000515385 ARPC5LQ9BPX5 153 aa13.58□□□□□ -0.24
SMAD1-215ENST00000515385 ANKRD2Q9GZV1 360 aa13.58□□□□□ -0.24
SMAD1-215ENST00000515385 SEPT11Q9NVA2 429 aaKnown RBP13.58□□□□□ -0.24
SMAD1-215ENST00000515385 TAS2R1Q9NYW7 299 aa13.58□□□□□ -0.24
SMAD1-215ENST00000515385 EXOC1LA0A1B0GW35 172 aa13.57□□□□□ -0.24
SMAD1-215ENST00000515385 TCRBV7S2A1N4TA0A589 114 aa13.57□□□□□ -0.24
SMAD1-215ENST00000515385 AP1G1O43747 822 aa13.57□□□□□ -0.24
SMAD1-215ENST00000515385 MARCH6O60337 910 aa13.57□□□□□ -0.24
SMAD1-215ENST00000515385 OPHN1O60890 802 aa13.57□□□□□ -0.24
SMAD1-215ENST00000515385 VIL1P09327 827 aaKnown RBP13.57□□□□□ -0.24
SMAD1-215ENST00000515385 CYP2D6P10635 497 aa13.57□□□□□ -0.24
SMAD1-215ENST00000515385 IDO1P14902 403 aa13.57□□□□□ -0.24
SMAD1-215ENST00000515385 CPA3P15088 417 aa13.57□□□□□ -0.24
SMAD1-215ENST00000515385 CA4P22748 312 aa13.57□□□□□ -0.24
SMAD1-215ENST00000515385 SERPINB3P29508 390 aa13.57□□□□□ -0.24
SMAD1-215ENST00000515385 ADCY7P51828 1080 aa13.57□□□□□ -0.24
SMAD1-215ENST00000515385 MED21Q13503 144 aa13.57□□□□□ -0.24
SMAD1-215ENST00000515385 MESDQ14696 234 aa13.57□□□□□ -0.24
SMAD1-215ENST00000515385 KBTBD12Q3ZCT8 623 aa13.57□□□□□ -0.24
SMAD1-215ENST00000515385 HSP90AA5PQ58FG0 334 aa13.57□□□□□ -0.24
SMAD1-215ENST00000515385 CFAP157Q5JU67 520 aa13.57□□□□□ -0.24
SMAD1-215ENST00000515385 MAP3K21Q5TCX8 1036 aa13.57□□□□□ -0.24
SMAD1-215ENST00000515385 TMPRSS6Q8IU80 811 aa13.57□□□□□ -0.24
SMAD1-215ENST00000515385 TMEM47Q9BQJ4 181 aa13.57□□□□□ -0.24
SMAD1-215ENST00000515385 MKNK1Q9BUB5 465 aa13.57□□□□□ -0.24
SMAD1-215ENST00000515385 POLR3CQ9BUI4 534 aaPredicted RBP13.57□□□□□ -0.24
SMAD1-215ENST00000515385 HEY2Q9UBP5 337 aa13.57□□□□□ -0.24
SMAD1-215ENST00000515385 ITGB1BP2Q9UKP3 347 aa13.57□□□□□ -0.24
SMAD1-215ENST00000515385 PAIP2BQ9ULR5 123 aaKnown RBP13.57□□□□□ -0.24
SMAD1-215ENST00000515385 TMEM98Q9Y2Y6 226 aa13.57□□□□□ -0.24
SMAD1-215ENST00000515385 GSTTP1A0A1W2PQM5 241 aa13.57□□□□□ -0.24
SMAD1-215ENST00000515385 TMEM110-MUSTN1A8MSY1 372 aa13.57□□□□□ -0.24
SMAD1-215ENST00000515385 SPOPO43791 374 aa13.57□□□□□ -0.24
SMAD1-215ENST00000515385 FTLP02792 175 aaPredicted RBP13.57□□□□□ -0.24
SMAD1-215ENST00000515385 TSPY3P0CV98 308 aa13.57□□□□□ -0.24
SMAD1-215ENST00000515385 TSPY8P0CW00 308 aa13.57□□□□□ -0.24
SMAD1-215ENST00000515385 CHRNB2P17787 502 aa13.57□□□□□ -0.24
SMAD1-215ENST00000515385 ADCY8P40145 1251 aa13.57□□□□□ -0.24
SMAD1-215ENST00000515385 CCNFP41002 786 aa13.57□□□□□ -0.24
SMAD1-215ENST00000515385 ARFIP2P53365 341 aa13.57□□□□□ -0.24
SMAD1-215ENST00000515385 CDK16Q00536 496 aa13.57□□□□□ -0.24
SMAD1-215ENST00000515385 ZBTB16Q05516 673 aa13.57□□□□□ -0.24
SMAD1-215ENST00000515385 CHRNDQ07001 517 aa13.57□□□□□ -0.24
SMAD1-215ENST00000515385 ADCY1Q08828 1119 aa13.57□□□□□ -0.24
SMAD1-215ENST00000515385 CDC16Q13042 620 aa13.57□□□□□ -0.24
SMAD1-215ENST00000515385 USH1GQ495M9 461 aa13.57□□□□□ -0.24
SMAD1-215ENST00000515385 CAVIN4Q5BKX8 364 aa13.57□□□□□ -0.24
SMAD1-215ENST00000515385 ANKS1BQ7Z6G8 1248 aa13.57□□□□□ -0.24
SMAD1-215ENST00000515385 CCDC89Q8N998 374 aa13.57□□□□□ -0.24
SMAD1-215ENST00000515385 SLC35B4Q969S0 331 aa13.57□□□□□ -0.24
SMAD1-215ENST00000515385 SKA1Q96BD8 255 aa13.57□□□□□ -0.24
SMAD1-215ENST00000515385 NSUN4Q96CB9 384 aaKnown RBP13.57□□□□□ -0.24
SMAD1-215ENST00000515385 CLMNQ96JQ2 1002 aa13.57□□□□□ -0.24
SMAD1-215ENST00000515385 KIAA1586Q9HCI6 787 aa13.57□□□□□ -0.24
SMAD1-215ENST00000515385 PCDH18Q9HCL0 1135 aa13.57□□□□□ -0.24
SMAD1-215ENST00000515385 TBCCD1Q9NVR7 557 aa13.57□□□□□ -0.24
SMAD1-215ENST00000515385 RHBDL2Q9NX52 303 aa13.57□□□□□ -0.24
SMAD1-215ENST00000515385 TAS2R14Q9NYV8 317 aa13.57□□□□□ -0.24
SMAD1-215ENST00000515385 SLC24A2Q9UI40 661 aa13.57□□□□□ -0.24
SMAD1-215ENST00000515385 PCDHA12Q9UN75 941 aa13.57□□□□□ -0.24
SMAD1-215ENST00000515385 KIAA1024Q9UPX6 916 aa13.57□□□□□ -0.24
SMAD1-215ENST00000515385 CHMP2BQ9UQN3 213 aa13.57□□□□□ -0.24
SMAD1-215ENST00000515385 SH3GLB1Q9Y371 365 aa13.57□□□□□ -0.24
SMAD1-215ENST00000515385 WASF2Q9Y6W5 498 aa13.57□□□□□ -0.24
SMAD1-215ENST00000515385 DCCP43146 1447 aa13.56□□□□□ -0.24
SMAD1-215ENST00000515385 A0A0J9YVX5 310 aa13.56□□□□□ -0.24
SMAD1-215ENST00000515385 E9PMD0 336 aa13.56□□□□□ -0.24
SMAD1-215ENST00000515385 TYROBPO43914 113 aa13.56□□□□□ -0.24
SMAD1-215ENST00000515385 KRT15P19012 456 aa13.56□□□□□ -0.24
SMAD1-215ENST00000515385 RPA3P35244 121 aaPredicted RBP13.56□□□□□ -0.24
SMAD1-215ENST00000515385 PSMC2P35998 433 aaKnown RBP13.56□□□□□ -0.24
SMAD1-215ENST00000515385 CENPCQ03188 943 aa13.56□□□□□ -0.24
SMAD1-215ENST00000515385 UBE4AQ14139 1066 aa13.56□□□□□ -0.24
SMAD1-215ENST00000515385 C12orf60Q5U649 245 aa13.56□□□□□ -0.24
SMAD1-215ENST00000515385 DNAJC10Q8IXB1 793 aa13.56□□□□□ -0.24
SMAD1-215ENST00000515385 ZNF34Q8IZ26 560 aa13.56□□□□□ -0.24
SMAD1-215ENST00000515385 RSPH1Q8WYR4 309 aa13.56□□□□□ -0.24
SMAD1-215ENST00000515385 POP1Q99575 1024 aaKnown RBP13.56□□□□□ -0.24
SMAD1-215ENST00000515385 GPR88Q9GZN0 384 aa13.56□□□□□ -0.24
SMAD1-215ENST00000515385 MKNK2Q9HBH9 465 aa13.56□□□□□ -0.24
SMAD1-215ENST00000515385 TMEM260Q9NX78 707 aa13.56□□□□□ -0.24
SMAD1-215ENST00000515385 APEX2Q9UBZ4 518 aa13.56□□□□□ -0.24
SMAD1-215ENST00000515385 DDX25Q9UHL0 483 aaKnown RBP13.56□□□□□ -0.24
SMAD1-215ENST00000515385 GRID1Q9ULK0 1009 aa13.56□□□□□ -0.24
SMAD1-215ENST00000515385 KIAA1551Q9HCM1 1747 aa13.56□□□□□ -0.24
SMAD1-215ENST00000515385 RNASEH1O60930 286 aaKnown RBP13.55□□□□□ -0.24
SMAD1-215ENST00000515385 BCRP11274 1271 aa13.55□□□□□ -0.24
SMAD1-215ENST00000515385 ETS2P15036 469 aa13.55□□□□□ -0.24
SMAD1-215ENST00000515385 ZFXP17010 805 aaPredicted RBP13.55□□□□□ -0.24
SMAD1-215ENST00000515385 MAGEA4P43358 317 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms