RNA–Protein interactions for RNA: ENST00000515239.5

CSF1R-208, Transcript of colony stimulating factor 1 receptor, humanhuman

TSL 3

Gene CSF1R, Length 584 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSF1R-208ENST00000515239 DDX27Q96GQ7 796 aaKnown RBP13.08□□□□□ -0.32
CSF1R-208ENST00000515239 MSANTD3Q96H12 275 aa13.08□□□□□ -0.32
CSF1R-208ENST00000515239 NFKBIZQ9BYH8 718 aa13.08□□□□□ -0.32
CSF1R-208ENST00000515239 C8orf33Q9H7E9 229 aaPredicted RBP13.08□□□□□ -0.32
CSF1R-208ENST00000515239 VPS45Q9NRW7 570 aa13.08□□□□□ -0.32
CSF1R-208ENST00000515239 VAV3Q9UKW4 847 aa13.08□□□□□ -0.32
CSF1R-208ENST00000515239 SLC38A8A6NNN8 435 aa13.07□□□□□ -0.32
CSF1R-208ENST00000515239 HEPACAM2A8MVW5 462 aa13.07□□□□□ -0.32
CSF1R-208ENST00000515239 CHADO15335 359 aa13.07□□□□□ -0.32
CSF1R-208ENST00000515239 DKC1O60832 514 aaKnown RBP eCLIP13.07□□□□□ -0.32
CSF1R-208ENST00000515239 SEC24AO95486 1093 aa13.07□□□□□ -0.32
CSF1R-208ENST00000515239 ATF2P15336 505 aa13.07□□□□□ -0.32
CSF1R-208ENST00000515239 GJA1P17302 382 aa13.07□□□□□ -0.32
CSF1R-208ENST00000515239 KPNA1P52294 538 aaPredicted RBP13.07□□□□□ -0.32
CSF1R-208ENST00000515239 CAPSQ13938 189 aa13.07□□□□□ -0.32
CSF1R-208ENST00000515239 CCINQ13939 588 aa13.07□□□□□ -0.32
CSF1R-208ENST00000515239 TFDP1Q14186 410 aa13.07□□□□□ -0.32
CSF1R-208ENST00000515239 CYP4A22Q5TCH4 519 aa13.07□□□□□ -0.32
CSF1R-208ENST00000515239 SLC8B1Q6J4K2 584 aa13.07□□□□□ -0.32
CSF1R-208ENST00000515239 PDZD4Q76G19 769 aaPredicted RBP13.07□□□□□ -0.32
CSF1R-208ENST00000515239 OTUD6AQ7L8S5 288 aa13.07□□□□□ -0.32
CSF1R-208ENST00000515239 SYNPOQ8N3V7 929 aa13.07□□□□□ -0.32
CSF1R-208ENST00000515239 ZSCAN18Q8TBC5 510 aaPredicted RBP13.07□□□□□ -0.32
CSF1R-208ENST00000515239 CSGALNACT1Q8TDX6 532 aa13.07□□□□□ -0.32
CSF1R-208ENST00000515239 MTRQ99707 1265 aa13.07□□□□□ -0.32
CSF1R-208ENST00000515239 RGL1Q9NZL6 768 aa13.07□□□□□ -0.32
CSF1R-208ENST00000515239 VPS54Q9P1Q0 977 aa13.07□□□□□ -0.32
CSF1R-208ENST00000515239 LAMA1P25391 3075 aa13.07□□□□□ -0.32
CSF1R-208ENST00000515239 FLNBO75369 2602 aaKnown RBP13.06□□□□□ -0.32
CSF1R-208ENST00000515239 CCDC196A0A1B0GTZ2 297 aa13.06□□□□□ -0.32
CSF1R-208ENST00000515239 SPECC1L-ADORA2AF8WAN1 911 aa13.06□□□□□ -0.32
CSF1R-208ENST00000515239 TMEM189-UBE2V1I3L0A0 370 aa13.06□□□□□ -0.32
CSF1R-208ENST00000515239 I3L4J1 428 aa13.06□□□□□ -0.32
CSF1R-208ENST00000515239 PRRG1O14668 218 aa13.06□□□□□ -0.32
CSF1R-208ENST00000515239 B3GAT3O94766 335 aa13.06□□□□□ -0.32
CSF1R-208ENST00000515239 CEACAM1P13688 526 aa13.06□□□□□ -0.32
CSF1R-208ENST00000515239 ELF1P32519 619 aa13.06□□□□□ -0.32
CSF1R-208ENST00000515239 CTHP32929 405 aa13.06□□□□□ -0.32
CSF1R-208ENST00000515239 ARL2P36404 184 aa13.06□□□□□ -0.32
CSF1R-208ENST00000515239 FCHO2Q0JRZ9 810 aa13.06□□□□□ -0.32
CSF1R-208ENST00000515239 NTRK3Q16288 839 aa13.06□□□□□ -0.32
CSF1R-208ENST00000515239 SOWAHCQ53LP3 525 aaPredicted RBP13.06□□□□□ -0.32
CSF1R-208ENST00000515239 PKN3Q6P5Z2 889 aa13.06□□□□□ -0.32
CSF1R-208ENST00000515239 MOXD1Q6UVY6 613 aa13.06□□□□□ -0.32
CSF1R-208ENST00000515239 ANKS3Q6ZW76 656 aa13.06□□□□□ -0.32
CSF1R-208ENST00000515239 RALGPS2Q86X27 583 aaPredicted RBP13.06□□□□□ -0.32
CSF1R-208ENST00000515239 CCDC148Q8NFR7 591 aa13.06□□□□□ -0.32
CSF1R-208ENST00000515239 LXNQ9BS40 222 aa13.06□□□□□ -0.32
CSF1R-208ENST00000515239 EDEM2Q9BV94 578 aa13.06□□□□□ -0.32
CSF1R-208ENST00000515239 SLKQ9H2G2 1235 aaPredicted RBP13.06□□□□□ -0.32
CSF1R-208ENST00000515239 SNTG2Q9NY99 539 aa13.06□□□□□ -0.32
CSF1R-208ENST00000515239 CEP72Q9P209 647 aa13.06□□□□□ -0.32
CSF1R-208ENST00000515239 INSL5Q9Y5Q6 135 aa13.06□□□□□ -0.32
CSF1R-208ENST00000515239 GCN1Q92616 2671 aaKnown RBP13.06□□□□□ -0.32
CSF1R-208ENST00000515239 PDCD11Q14690 1871 aaKnown RBP13.06□□□□□ -0.32
CSF1R-208ENST00000515239 NBEAQ8NFP9 2946 aa13.06□□□□□ -0.32
CSF1R-208ENST00000515239 TTLL13PA6NNM8 815 aa13.05□□□□□ -0.32
CSF1R-208ENST00000515239 SLC37A4O43826 429 aa13.05□□□□□ -0.32
CSF1R-208ENST00000515239 AKAP3O75969 853 aa13.05□□□□□ -0.32
CSF1R-208ENST00000515239 CCDC192P0DO97 292 aa13.05□□□□□ -0.32
CSF1R-208ENST00000515239 CSRP1P21291 193 aaKnown RBP13.05□□□□□ -0.32
CSF1R-208ENST00000515239 GLRA2P23416 452 aa13.05□□□□□ -0.32
CSF1R-208ENST00000515239 BRCC3P46736 316 aa13.05□□□□□ -0.32
CSF1R-208ENST00000515239 RBM25P49756 843 aaKnown RBP13.05□□□□□ -0.32
CSF1R-208ENST00000515239 CLCNKBP51801 687 aa13.05□□□□□ -0.32
CSF1R-208ENST00000515239 EPHA5P54756 1037 aa13.05□□□□□ -0.32
CSF1R-208ENST00000515239 PON2Q15165 354 aa13.05□□□□□ -0.32
CSF1R-208ENST00000515239 EPHA7Q15375 998 aa13.05□□□□□ -0.32
CSF1R-208ENST00000515239 ADCK5Q3MIX3 580 aa13.05□□□□□ -0.32
CSF1R-208ENST00000515239 PLK5Q496M5 336 aa13.05□□□□□ -0.32
CSF1R-208ENST00000515239 DAB2IPQ5VWQ8 1189 aa13.05□□□□□ -0.32
CSF1R-208ENST00000515239 C3orf58Q8NDZ4 430 aa13.05□□□□□ -0.32
CSF1R-208ENST00000515239 TTC8Q8TAM2 541 aa13.05□□□□□ -0.32
CSF1R-208ENST00000515239 E2F7Q96AV8 911 aa13.05□□□□□ -0.32
CSF1R-208ENST00000515239 LRRC3BQ96PB8 259 aa13.05□□□□□ -0.32
CSF1R-208ENST00000515239 C22orf23Q9BZE7 217 aa13.05□□□□□ -0.32
CSF1R-208ENST00000515239 DUSP15Q9H1R2 295 aaPredicted RBP13.05□□□□□ -0.32
CSF1R-208ENST00000515239 CYP4F11Q9HBI6 524 aa13.05□□□□□ -0.32
CSF1R-208ENST00000515239 KCNMB3Q9NPA1 279 aa13.05□□□□□ -0.32
CSF1R-208ENST00000515239 GTSE1Q9NYZ3 720 aa13.05□□□□□ -0.32
CSF1R-208ENST00000515239 DDX25Q9UHL0 483 aaKnown RBP13.05□□□□□ -0.32
CSF1R-208ENST00000515239 NAP1L2Q9ULW6 460 aaPredicted RBP13.05□□□□□ -0.32
CSF1R-208ENST00000515239 M0R2N6 131 aa13.04□□□□□ -0.32
CSF1R-208ENST00000515239 TBX3O15119 743 aa13.04□□□□□ -0.32
CSF1R-208ENST00000515239 RECQL4O94761 1208 aa13.04□□□□□ -0.32
CSF1R-208ENST00000515239 MYL4P12829 197 aa13.04□□□□□ -0.32
CSF1R-208ENST00000515239 NLRP5P59047 1200 aa13.04□□□□□ -0.32
CSF1R-208ENST00000515239 TEAD2Q15562 447 aa13.04□□□□□ -0.32
CSF1R-208ENST00000515239 GPIHBP1Q8IV16 184 aa13.04□□□□□ -0.32
CSF1R-208ENST00000515239 YAF2Q8IY57 180 aa13.04□□□□□ -0.32
CSF1R-208ENST00000515239 RASEFQ8IZ41 740 aa13.04□□□□□ -0.32
CSF1R-208ENST00000515239 DYDC2Q96IM9 177 aa13.04□□□□□ -0.32
CSF1R-208ENST00000515239 ZNF512Q96ME7 567 aaPredicted RBP13.04□□□□□ -0.32
CSF1R-208ENST00000515239 FAM20AQ96MK3 541 aa13.04□□□□□ -0.32
CSF1R-208ENST00000515239 ESYT1Q9BSJ8 1104 aa13.04□□□□□ -0.32
CSF1R-208ENST00000515239 GPR88Q9GZN0 384 aa13.04□□□□□ -0.32
CSF1R-208ENST00000515239 ZSWIM4Q9H7M6 989 aa13.04□□□□□ -0.32
CSF1R-208ENST00000515239 SH3GLB2Q9NR46 395 aa13.04□□□□□ -0.32
CSF1R-208ENST00000515239 EML5Q05BV3 1969 aa13.03□□□□□ -0.32
CSF1R-208ENST00000515239 LNP1A1A4G5 178 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms