RNA–Protein interactions for RNA: ENST00000514654.5

ATP2C1-222, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

TSL 1 (best)

Gene ATP2C1, Length 4,730 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-222ENST00000514654 NIF3L1Q9GZT8 377 aa6.52□□□□□ -1.36
ATP2C1-222ENST00000514654 PRMT7Q9NVM4 692 aaPredicted RBP6.52□□□□□ -1.36
ATP2C1-222ENST00000514654 EIF2AK3Q9NZJ5 1116 aaKnown RBP6.52□□□□□ -1.36
ATP2C1-222ENST00000514654 ARHGAP20Q9P2F6 1191 aa6.52□□□□□ -1.36
ATP2C1-222ENST00000514654 CPA4Q9UI42 421 aa6.52□□□□□ -1.36
ATP2C1-222ENST00000514654 DCTN4Q9UJW0 460 aa6.52□□□□□ -1.36
ATP2C1-222ENST00000514654 ANGPTL3Q9Y5C1 460 aa6.52□□□□□ -1.36
ATP2C1-222ENST00000514654 CLGNO14967 610 aa6.52□□□□□ -1.37
ATP2C1-222ENST00000514654 PLSCR1O15162 318 aa6.52□□□□□ -1.37
ATP2C1-222ENST00000514654 MAP3K6O95382 1288 aa6.52□□□□□ -1.37
ATP2C1-222ENST00000514654 KITP10721 976 aa6.52□□□□□ -1.37
ATP2C1-222ENST00000514654 SERPINB6P35237 376 aa6.52□□□□□ -1.37
ATP2C1-222ENST00000514654 LAMC2Q13753 1193 aa6.52□□□□□ -1.37
ATP2C1-222ENST00000514654 DGKDQ16760 1214 aa6.52□□□□□ -1.37
ATP2C1-222ENST00000514654 MUM1Q2TAK8 710 aa6.52□□□□□ -1.37
ATP2C1-222ENST00000514654 JADE1Q6IE81 842 aa6.52□□□□□ -1.37
ATP2C1-222ENST00000514654 LRRC31Q6UY01 552 aa6.52□□□□□ -1.37
ATP2C1-222ENST00000514654 TBC1D1Q86TI0 1168 aaPredicted RBP6.52□□□□□ -1.37
ATP2C1-222ENST00000514654 SPATA24Q86W54 205 aa6.52□□□□□ -1.37
ATP2C1-222ENST00000514654 URGCPQ8TCY9 931 aa6.52□□□□□ -1.37
ATP2C1-222ENST00000514654 MORC4Q8TE76 937 aa6.52□□□□□ -1.37
ATP2C1-222ENST00000514654 DUSP9Q99956 384 aaKnown RBP6.52□□□□□ -1.37
ATP2C1-222ENST00000514654 VCX3BQ9H321 246 aa6.52□□□□□ -1.37
ATP2C1-222ENST00000514654 GAKO14976 1311 aa6.52□□□□□ -1.37
ATP2C1-222ENST00000514654 SIPA1L2Q9P2F8 1722 aaPredicted RBP6.52□□□□□ -1.37
ATP2C1-222ENST00000514654 TISP43B9A030 160 aa6.52□□□□□ -1.37
ATP2C1-222ENST00000514654 CFLARO15519 480 aa6.52□□□□□ -1.37
ATP2C1-222ENST00000514654 KCNN4O15554 427 aa6.52□□□□□ -1.37
ATP2C1-222ENST00000514654 ATP9BO43861 1147 aa6.52□□□□□ -1.37
ATP2C1-222ENST00000514654 TFRCP02786 760 aaKnown RBP6.52□□□□□ -1.37
ATP2C1-222ENST00000514654 HMBSP08397 361 aa6.52□□□□□ -1.37
ATP2C1-222ENST00000514654 HOXD10P28358 340 aa6.52□□□□□ -1.37
ATP2C1-222ENST00000514654 GRIK1P39086 918 aa6.52□□□□□ -1.37
ATP2C1-222ENST00000514654 CASP2P42575 452 aa6.52□□□□□ -1.37
ATP2C1-222ENST00000514654 SPARCL1Q14515 664 aa6.52□□□□□ -1.37
ATP2C1-222ENST00000514654 P3H1Q32P28 736 aa6.52□□□□□ -1.37
ATP2C1-222ENST00000514654 PCNX4Q63HM2 1172 aa6.52□□□□□ -1.37
ATP2C1-222ENST00000514654 OTOP1Q7RTM1 612 aa6.52□□□□□ -1.37
ATP2C1-222ENST00000514654 SLC20A1Q8WUM9 679 aa6.52□□□□□ -1.37
ATP2C1-222ENST00000514654 TRAPPC12Q8WVT3 735 aa6.52□□□□□ -1.37
ATP2C1-222ENST00000514654 OPTNQ96CV9 577 aa6.52□□□□□ -1.37
ATP2C1-222ENST00000514654 DDX23Q9BUQ8 820 aaKnown RBP6.52□□□□□ -1.37
ATP2C1-222ENST00000514654 NT5C1AQ9BXI3 368 aa6.52□□□□□ -1.37
ATP2C1-222ENST00000514654 OSBPL8Q9BZF1 889 aa6.52□□□□□ -1.37
ATP2C1-222ENST00000514654 SPATC1LQ9H0A9 340 aa6.52□□□□□ -1.37
ATP2C1-222ENST00000514654 KIAA1683Q9H0B3 1180 aa6.52□□□□□ -1.37
ATP2C1-222ENST00000514654 ZFYVE28Q9HCC9 887 aa6.52□□□□□ -1.37
ATP2C1-222ENST00000514654 DDX56Q9NY93 547 aaKnown RBP6.52□□□□□ -1.37
ATP2C1-222ENST00000514654 INTUQ9ULD6 942 aa6.52□□□□□ -1.37
ATP2C1-222ENST00000514654 A0A1B0GUA9 196 aa6.52□□□□□ -1.37
ATP2C1-222ENST00000514654 DFFAO00273 331 aa6.52□□□□□ -1.37
ATP2C1-222ENST00000514654 ASAP2O43150 1006 aa6.52□□□□□ -1.37
ATP2C1-222ENST00000514654 APRTP07741 180 aa6.52□□□□□ -1.37
ATP2C1-222ENST00000514654 CYP2C8P10632 490 aa6.52□□□□□ -1.37
ATP2C1-222ENST00000514654 DSG3P32926 999 aa6.52□□□□□ -1.37
ATP2C1-222ENST00000514654 SLC1A1P43005 524 aa6.52□□□□□ -1.37
ATP2C1-222ENST00000514654 RARRES1P49788 294 aa6.52□□□□□ -1.37
ATP2C1-222ENST00000514654 PPP2R2AP63151 447 aa6.52□□□□□ -1.37
ATP2C1-222ENST00000514654 DHX34Q14147 1143 aaKnown RBP6.52□□□□□ -1.37
ATP2C1-222ENST00000514654 ZNF571Q7Z3V5 609 aaPredicted RBP6.52□□□□□ -1.37
ATP2C1-222ENST00000514654 PDCD7Q8N8D1 485 aaKnown RBP6.52□□□□□ -1.37
ATP2C1-222ENST00000514654 USP33Q8TEY7 942 aa6.52□□□□□ -1.37
ATP2C1-222ENST00000514654 PPP1R13LQ8WUF5 828 aa6.52□□□□□ -1.37
ATP2C1-222ENST00000514654 ATP6V1G3Q96LB4 118 aa6.52□□□□□ -1.37
ATP2C1-222ENST00000514654 TRIM56Q9BRZ2 755 aaKnown RBP6.52□□□□□ -1.37
ATP2C1-222ENST00000514654 NUF2Q9BZD4 464 aa6.52□□□□□ -1.37
ATP2C1-222ENST00000514654 OSGEPQ9NPF4 335 aa6.52□□□□□ -1.37
ATP2C1-222ENST00000514654 PRDM5Q9NQX1 630 aaPredicted RBP6.52□□□□□ -1.37
ATP2C1-222ENST00000514654 TSR3Q9UJK0 312 aaKnown RBP6.52□□□□□ -1.37
ATP2C1-222ENST00000514654 TARSL2A2RTX5 802 aaKnown RBP6.51□□□□□ -1.37
ATP2C1-222ENST00000514654 KRT38O76015 456 aa6.51□□□□□ -1.37
ATP2C1-222ENST00000514654 BMP6P22004 513 aa6.51□□□□□ -1.37
ATP2C1-222ENST00000514654 SULT1E1P49888 294 aa6.51□□□□□ -1.37
ATP2C1-222ENST00000514654 HERVK_113P62684 666 aa6.51□□□□□ -1.37
ATP2C1-222ENST00000514654 CUL2Q13617 745 aa6.51□□□□□ -1.37
ATP2C1-222ENST00000514654 JAMLQ86YT9 394 aa6.51□□□□□ -1.37
ATP2C1-222ENST00000514654 TRIM42Q8IWZ5 723 aa6.51□□□□□ -1.37
ATP2C1-222ENST00000514654 TTC39CQ8N584 583 aa6.51□□□□□ -1.37
ATP2C1-222ENST00000514654 RDM1Q8NG50 284 aa6.51□□□□□ -1.37
ATP2C1-222ENST00000514654 TPCN2Q8NHX9 752 aa6.51□□□□□ -1.37
ATP2C1-222ENST00000514654 ALKBH8Q96BT7 664 aaKnown RBP6.51□□□□□ -1.37
ATP2C1-222ENST00000514654 CPB2Q96IY4 423 aa6.51□□□□□ -1.37
ATP2C1-222ENST00000514654 DBR1Q9UK59 544 aaKnown RBP6.51□□□□□ -1.37
ATP2C1-222ENST00000514654 PRG3Q9Y2Y8 225 aaPredicted RBP6.51□□□□□ -1.37
ATP2C1-222ENST00000514654 MORC2Q9Y6X9 1032 aaPredicted RBP6.51□□□□□ -1.37
ATP2C1-222ENST00000514654 APOL1O14791 398 aa6.51□□□□□ -1.37
ATP2C1-222ENST00000514654 ZBTB24O43167 697 aaPredicted RBP6.51□□□□□ -1.37
ATP2C1-222ENST00000514654 CST8O60676 142 aa6.51□□□□□ -1.37
ATP2C1-222ENST00000514654 ZNF286BP0CG31 522 aa6.51□□□□□ -1.37
ATP2C1-222ENST00000514654 NUMBP49757 651 aa6.51□□□□□ -1.37
ATP2C1-222ENST00000514654 CDK17Q00537 523 aa6.51□□□□□ -1.37
ATP2C1-222ENST00000514654 CAV1Q03135 178 aa6.51□□□□□ -1.37
ATP2C1-222ENST00000514654 POU5F1BQ06416 359 aa6.51□□□□□ -1.37
ATP2C1-222ENST00000514654 LONRF1Q17RB8 773 aa6.51□□□□□ -1.37
ATP2C1-222ENST00000514654 PAN2Q504Q3 1202 aaKnown RBP6.51□□□□□ -1.37
ATP2C1-222ENST00000514654 SV2AQ7L0J3 742 aa6.51□□□□□ -1.37
ATP2C1-222ENST00000514654 RAB44Q7Z6P3 723 aaPredicted RBP6.51□□□□□ -1.37
ATP2C1-222ENST00000514654 EFCAB13Q8IY85 973 aa6.51□□□□□ -1.37
ATP2C1-222ENST00000514654 CCDC33Q8N5R6 958 aa6.51□□□□□ -1.37
ATP2C1-222ENST00000514654 USP38Q8NB14 1042 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms