RNA–Protein interactions for RNA: ENST00000514231.1

PDE4D-221, Transcript of phosphodiesterase 4D, humanhuman

TSL 3

Gene PDE4D, Length 733 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-221ENST00000514231 MIGA2Q7L4E1 593 aa6.96□□□□□ -1.3
PDE4D-221ENST00000514231 UBE3BQ7Z3V4 1068 aa6.96□□□□□ -1.3
PDE4D-221ENST00000514231 CMTR2Q8IYT2 770 aaKnown RBP6.96□□□□□ -1.3
PDE4D-221ENST00000514231 FITM2Q8N6M3 262 aa6.96□□□□□ -1.3
PDE4D-221ENST00000514231 PRPF38AQ8NAV1 312 aaKnown RBP6.96□□□□□ -1.3
PDE4D-221ENST00000514231 NLGN4YQ8NFZ3 816 aaPredicted RBP6.96□□□□□ -1.3
PDE4D-221ENST00000514231 HDAC10Q969S8 669 aa6.96□□□□□ -1.3
PDE4D-221ENST00000514231 GSTO2Q9H4Y5 243 aa6.96□□□□□ -1.3
PDE4D-221ENST00000514231 MRFAP1Q9Y605 127 aa6.96□□□□□ -1.3
PDE4D-221ENST00000514231 EPN1Q9Y6I3 576 aaPredicted RBP6.96□□□□□ -1.3
PDE4D-221ENST00000514231 FZD9O00144 591 aa6.95□□□□□ -1.3
PDE4D-221ENST00000514231 GABRDO14764 452 aa6.95□□□□□ -1.3
PDE4D-221ENST00000514231 MT-CO1P00395 513 aa6.95□□□□□ -1.3
PDE4D-221ENST00000514231 CREMQ03060 361 aa6.95□□□□□ -1.3
PDE4D-221ENST00000514231 NUP133Q8WUM0 1156 aa6.95□□□□□ -1.3
PDE4D-221ENST00000514231 CCDC8Q9H0W5 538 aaPredicted RBP6.95□□□□□ -1.3
PDE4D-221ENST00000514231 RUVBL1Q9Y265 456 aaKnown RBP6.95□□□□□ -1.3
PDE4D-221ENST00000514231 IPPQ9Y573 584 aa6.95□□□□□ -1.3
PDE4D-221ENST00000514231 TCRBV7S2A1N4TA0A589 114 aa6.94□□□□□ -1.3
PDE4D-221ENST00000514231 SGTAO43765 313 aa6.94□□□□□ -1.3
PDE4D-221ENST00000514231 GPANK1O95872 356 aa6.94□□□□□ -1.3
PDE4D-221ENST00000514231 FGFR4P22455 802 aa6.94□□□□□ -1.3
PDE4D-221ENST00000514231 CDC42EP1Q00587 391 aa6.94□□□□□ -1.3
PDE4D-221ENST00000514231 FOXR2Q6PJQ5 311 aa6.94□□□□□ -1.3
PDE4D-221ENST00000514231 DNAJC10Q8IXB1 793 aa6.94□□□□□ -1.3
PDE4D-221ENST00000514231 ASB10Q8WXI3 467 aa6.94□□□□□ -1.3
PDE4D-221ENST00000514231 ZSWIM1Q9BR11 485 aa6.94□□□□□ -1.3
PDE4D-221ENST00000514231 ALOXE3Q9BYJ1 711 aa6.94□□□□□ -1.3
PDE4D-221ENST00000514231 C11orf54Q9H0W9 315 aaPredicted RBP6.94□□□□□ -1.3
PDE4D-221ENST00000514231 TDP1Q9NUW8 608 aa6.94□□□□□ -1.3
PDE4D-221ENST00000514231 PCDHA13Q9Y5I0 950 aa6.94□□□□□ -1.3
PDE4D-221ENST00000514231 WASHC2CQ9Y4E1 1318 aa6.94□□□□□ -1.3
PDE4D-221ENST00000514231 HTRA2O43464 458 aaPredicted RBP6.93□□□□□ -1.3
PDE4D-221ENST00000514231 KATNA1O75449 491 aa6.93□□□□□ -1.3
PDE4D-221ENST00000514231 BMP5P22003 454 aa6.93□□□□□ -1.3
PDE4D-221ENST00000514231 SEC24CP53992 1094 aa6.93□□□□□ -1.3
PDE4D-221ENST00000514231 NANOS3P60323 173 aaKnown RBP6.93□□□□□ -1.3
PDE4D-221ENST00000514231 CXADRP78310 365 aa6.93□□□□□ -1.3
PDE4D-221ENST00000514231 SCAPQ12770 1279 aa6.93□□□□□ -1.3
PDE4D-221ENST00000514231 PCBP2Q15366 365 aaKnown RBP eCLIP6.93□□□□□ -1.36e-7■■■■■ 30.1
PDE4D-221ENST00000514231 OLFML1Q6UWY5 402 aa6.93□□□□□ -1.3
PDE4D-221ENST00000514231 GPR149Q86SP6 731 aa6.93□□□□□ -1.3
PDE4D-221ENST00000514231 RSPH3Q86UC2 560 aa6.93□□□□□ -1.3
PDE4D-221ENST00000514231 CAVIN3Q969G5 261 aa6.93□□□□□ -1.3
PDE4D-221ENST00000514231 COA7Q96BR5 231 aa6.93□□□□□ -1.3
PDE4D-221ENST00000514231 MARS2Q96GW9 593 aaKnown RBP6.93□□□□□ -1.3
PDE4D-221ENST00000514231 PNKPQ96T60 521 aa6.93□□□□□ -1.3
PDE4D-221ENST00000514231 SLC13A1Q9BZW2 595 aa6.93□□□□□ -1.3
PDE4D-221ENST00000514231 GALNT9Q9HCQ5 603 aa6.93□□□□□ -1.3
PDE4D-221ENST00000514231 KCNE5Q9UJ90 142 aa6.93□□□□□ -1.3
PDE4D-221ENST00000514231 LIMCH1Q9UPQ0 1083 aa6.93□□□□□ -1.3
PDE4D-221ENST00000514231 CCDC78A2IDD5 438 aa6.92□□□□□ -1.3
PDE4D-221ENST00000514231 MYADML2A6NDP7 307 aa6.92□□□□□ -1.3
PDE4D-221ENST00000514231 XPOTO43592 962 aaKnown RBP6.92□□□□□ -1.3
PDE4D-221ENST00000514231 ESRRBO95718 433 aa6.92□□□□□ -1.3
PDE4D-221ENST00000514231 ITGAMP11215 1152 aa6.92□□□□□ -1.3
PDE4D-221ENST00000514231 EDNRBP24530 442 aa6.92□□□□□ -1.3
PDE4D-221ENST00000514231 HSD11B2P80365 405 aa6.92□□□□□ -1.3
PDE4D-221ENST00000514231 TARDBPQ13148 414 aaKnown RBP eCLIP6.92□□□□□ -1.3
PDE4D-221ENST00000514231 ABCB5Q2M3G0 1257 aa6.92□□□□□ -1.3
PDE4D-221ENST00000514231 PPP4R3AQ6IN85 833 aa6.92□□□□□ -1.3
PDE4D-221ENST00000514231 MTMR8Q96EF0 704 aa6.92□□□□□ -1.3
PDE4D-221ENST00000514231 TEKT5Q96M29 485 aa6.92□□□□□ -1.3
PDE4D-221ENST00000514231 MED15Q96RN5 788 aa6.92□□□□□ -1.3
PDE4D-221ENST00000514231 SPEF1Q9Y4P9 236 aa6.92□□□□□ -1.3
PDE4D-221ENST00000514231 AATKQ6ZMQ8 1374 aa6.92□□□□□ -1.3
PDE4D-221ENST00000514231 KIAA0391O15091 583 aaKnown RBP6.91□□□□□ -1.3
PDE4D-221ENST00000514231 PPFIA2O75334 1257 aa6.91□□□□□ -1.3
PDE4D-221ENST00000514231 MTHFD1P11586 935 aaKnown RBP6.91□□□□□ -1.3
PDE4D-221ENST00000514231 NOMO3P69849 1222 aa6.91□□□□□ -1.3
PDE4D-221ENST00000514231 FOXI1Q12951 378 aa6.91□□□□□ -1.3
PDE4D-221ENST00000514231 FAM50AQ14320 339 aaKnown RBP6.91□□□□□ -1.3
PDE4D-221ENST00000514231 CYP2A13Q16696 494 aa6.91□□□□□ -1.3
PDE4D-221ENST00000514231 PABPC1LQ4VXU2 614 aaKnown RBP6.91□□□□□ -1.3
PDE4D-221ENST00000514231 NOMO2Q5JPE7 1267 aa6.91□□□□□ -1.3
PDE4D-221ENST00000514231 DCBLD1Q8N8Z6 715 aa6.91□□□□□ -1.3
PDE4D-221ENST00000514231 IL17RDQ8NFM7 739 aa6.91□□□□□ -1.3
PDE4D-221ENST00000514231 IFI44Q8TCB0 444 aa6.91□□□□□ -1.3
PDE4D-221ENST00000514231 SLC9A6Q92581 669 aa6.91□□□□□ -1.3
PDE4D-221ENST00000514231 NACC2Q96BF6 587 aa6.91□□□□□ -1.3
PDE4D-221ENST00000514231 TMX3Q96JJ7 454 aa6.91□□□□□ -1.3
PDE4D-221ENST00000514231 NIPSNAP3AQ9UFN0 247 aaPredicted RBP6.91□□□□□ -1.3
PDE4D-221ENST00000514231 MAST3O60307 1309 aa6.91□□□□□ -1.3
PDE4D-221ENST00000514231 CDHR4A6H8M9 788 aa6.9□□□□□ -1.3
PDE4D-221ENST00000514231 RPLP2P05387 115 aaKnown RBP6.9□□□□□ -1.3
PDE4D-221ENST00000514231 FDXRP22570 491 aa6.9□□□□□ -1.3
PDE4D-221ENST00000514231 MPLP40238 635 aa6.9□□□□□ -1.3
PDE4D-221ENST00000514231 EVA1CP58658 441 aa6.9□□□□□ -1.3
PDE4D-221ENST00000514231 RAB39AQ14964 217 aa6.9□□□□□ -1.3
PDE4D-221ENST00000514231 EFCAB2Q5VUJ9 269 aa6.9□□□□□ -1.3
PDE4D-221ENST00000514231 TBC1D15Q8TC07 691 aa6.9□□□□□ -1.3
PDE4D-221ENST00000514231 RNF31Q96EP0 1072 aa6.9□□□□□ -1.3
PDE4D-221ENST00000514231 MRGPRX4Q96LA9 322 aa6.9□□□□□ -1.3
PDE4D-221ENST00000514231 CRAMP1Q96RY5 1269 aa6.9□□□□□ -1.3
PDE4D-221ENST00000514231 RIOX1Q9H6W3 641 aa6.9□□□□□ -1.3
PDE4D-221ENST00000514231 SYNPO2LQ9H987 977 aa6.9□□□□□ -1.3
PDE4D-221ENST00000514231 PCDH12Q9NPG4 1184 aa6.9□□□□□ -1.3
PDE4D-221ENST00000514231 TBCCD1Q9NVR7 557 aa6.9□□□□□ -1.3
PDE4D-221ENST00000514231 CALCOCO1Q9P1Z2 691 aa6.9□□□□□ -1.3
PDE4D-221ENST00000514231 USP25Q9UHP3 1055 aa6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms