RNA–Protein interactions for RNA: ENST00000513346.5

TCOF1-211, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 4,646 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-211ENST00000513346 RHOT1Q8IXI2 618 aa11.87□□□□□ -0.51
TCOF1-211ENST00000513346 TTC13Q8NBP0 860 aa11.87□□□□□ -0.51
TCOF1-211ENST00000513346 K7ERI5 159 aa11.87□□□□□ -0.51
TCOF1-211ENST00000513346 PDE5AO76074 875 aa11.87□□□□□ -0.51
TCOF1-211ENST00000513346 HSPA4LO95757 839 aa11.87□□□□□ -0.51
TCOF1-211ENST00000513346 MAGEA4P43358 317 aa11.87□□□□□ -0.51
TCOF1-211ENST00000513346 RIPK1Q13546 671 aa11.87□□□□□ -0.51
TCOF1-211ENST00000513346 MTMR1Q13613 665 aa11.87□□□□□ -0.51
TCOF1-211ENST00000513346 FBXO33Q7Z6M2 555 aa11.87□□□□□ -0.51
TCOF1-211ENST00000513346 TRPV6Q9H1D0 765 aa11.87□□□□□ -0.51
TCOF1-211ENST00000513346 RNF146Q9NTX7 359 aa11.87□□□□□ -0.51
TCOF1-211ENST00000513346 ADAM22Q9P0K1 906 aa11.87□□□□□ -0.51
TCOF1-211ENST00000513346 MID2Q9UJV3 735 aa11.87□□□□□ -0.51
TCOF1-211ENST00000513346 CCDC195A0A1B0GUA6 201 aa11.87□□□□□ -0.51
TCOF1-211ENST00000513346 H3BRJ5 948 aa11.87□□□□□ -0.51
TCOF1-211ENST00000513346 GOLGA8RI6L899 631 aa11.87□□□□□ -0.51
TCOF1-211ENST00000513346 TPP2P29144 1249 aaPredicted RBP11.87□□□□□ -0.51
TCOF1-211ENST00000513346 FNTAP49354 379 aa11.87□□□□□ -0.51
TCOF1-211ENST00000513346 ITGA8P53708 1063 aa11.87□□□□□ -0.51
TCOF1-211ENST00000513346 ALDH18A1P54886 795 aaKnown RBP11.87□□□□□ -0.51
TCOF1-211ENST00000513346 ALCAMQ13740 583 aa11.87□□□□□ -0.51
TCOF1-211ENST00000513346 QRICH1Q2TAL8 776 aa11.87□□□□□ -0.51
TCOF1-211ENST00000513346 SPDYCQ5MJ68 293 aa11.87□□□□□ -0.51
TCOF1-211ENST00000513346 PPM1NQ8N819 430 aa11.87□□□□□ -0.51
TCOF1-211ENST00000513346 SEMA4AQ9H3S1 761 aa11.87□□□□□ -0.51
TCOF1-211ENST00000513346 KBTBD4Q9NVX7 518 aa11.87□□□□□ -0.51
TCOF1-211ENST00000513346 ADCY3O60266 1144 aa11.87□□□□□ -0.51
TCOF1-211ENST00000513346 SNX3O60493 162 aa11.87□□□□□ -0.51
TCOF1-211ENST00000513346 HSPA8P11142 646 aaKnown RBP11.87□□□□□ -0.51
TCOF1-211ENST00000513346 GCLMP48507 274 aa11.87□□□□□ -0.51
TCOF1-211ENST00000513346 NPEPPSP55786 919 aa11.87□□□□□ -0.51
TCOF1-211ENST00000513346 KCNJ2P63252 427 aa11.87□□□□□ -0.51
TCOF1-211ENST00000513346 STXBP2Q15833 593 aa11.87□□□□□ -0.51
TCOF1-211ENST00000513346 ACCSLQ4AC99 568 aa11.87□□□□□ -0.51
TCOF1-211ENST00000513346 MDH1BQ5I0G3 518 aa11.87□□□□□ -0.51
TCOF1-211ENST00000513346 TEDDM1Q5T9Z0 273 aa11.87□□□□□ -0.51
TCOF1-211ENST00000513346 CLEC10AQ8IUN9 316 aa11.87□□□□□ -0.51
TCOF1-211ENST00000513346 DEPDC1BQ8WUY9 529 aa11.87□□□□□ -0.51
TCOF1-211ENST00000513346 MAML3Q96JK9 1138 aa11.87□□□□□ -0.51
TCOF1-211ENST00000513346 CALN1Q9BXU9 219 aa11.87□□□□□ -0.51
TCOF1-211ENST00000513346 DAGLAQ9Y4D2 1042 aa11.87□□□□□ -0.51
TCOF1-211ENST00000513346 TDP2O95551 362 aa11.86□□□□□ -0.51
TCOF1-211ENST00000513346 SRGAP2CP0DJJ0 459 aa11.86□□□□□ -0.51
TCOF1-211ENST00000513346 KRT3P12035 628 aa11.86□□□□□ -0.51
TCOF1-211ENST00000513346 IFI35P80217 286 aaPredicted RBP11.86□□□□□ -0.51
TCOF1-211ENST00000513346 SLC34A1Q06495 639 aa11.86□□□□□ -0.51
TCOF1-211ENST00000513346 GABPAQ06546 454 aa11.86□□□□□ -0.51
TCOF1-211ENST00000513346 HEY2Q9UBP5 337 aa11.86□□□□□ -0.51
TCOF1-211ENST00000513346 TSC22D4Q9Y3Q8 395 aa11.86□□□□□ -0.51
TCOF1-211ENST00000513346 MYOM1P52179 1685 aa11.86□□□□□ -0.51
TCOF1-211ENST00000513346 SLC16A3O15427 465 aaKnown RBP11.86□□□□□ -0.51
TCOF1-211ENST00000513346 KDM1AO60341 852 aa11.86□□□□□ -0.51
TCOF1-211ENST00000513346 SAT1P21673 171 aa11.86□□□□□ -0.51
TCOF1-211ENST00000513346 COMTP21964 271 aa11.86□□□□□ -0.51
TCOF1-211ENST00000513346 ARSEP51690 589 aa11.86□□□□□ -0.51
TCOF1-211ENST00000513346 PMS1P54277 932 aaKnown RBP11.86□□□□□ -0.51
TCOF1-211ENST00000513346 STX1BP61266 288 aa11.86□□□□□ -0.51
TCOF1-211ENST00000513346 HIF1AQ16665 826 aa11.86□□□□□ -0.51
TCOF1-211ENST00000513346 LACTB2Q53H82 288 aaPredicted RBP11.86□□□□□ -0.51
TCOF1-211ENST00000513346 NSUN6Q8TEA1 469 aaKnown RBP11.86□□□□□ -0.51
TCOF1-211ENST00000513346 TRAPPC9Q96Q05 1148 aa11.86□□□□□ -0.51
TCOF1-211ENST00000513346 ADAM33Q9BZ11 813 aa11.86□□□□□ -0.51
TCOF1-211ENST00000513346 MRPL40Q9NQ50 206 aaKnown RBP11.86□□□□□ -0.51
TCOF1-211ENST00000513346 PFDN4Q9NQP4 134 aa11.86□□□□□ -0.51
TCOF1-211ENST00000513346 CYP39A1Q9NYL5 469 aa11.86□□□□□ -0.51
TCOF1-211ENST00000513346 UVRAGQ9P2Y5 699 aa11.86□□□□□ -0.51
TCOF1-211ENST00000513346 TTC36A6NLP5 189 aa11.86□□□□□ -0.51
TCOF1-211ENST00000513346 AGPSO00116 658 aa11.86□□□□□ -0.51
TCOF1-211ENST00000513346 SUPT3HO75486 399 aa11.86□□□□□ -0.51
TCOF1-211ENST00000513346 KLRK1P26718 216 aa11.86□□□□□ -0.51
TCOF1-211ENST00000513346 OSTNP61366 133 aa11.86□□□□□ -0.51
TCOF1-211ENST00000513346 CENPPQ6IPU0 288 aa11.86□□□□□ -0.51
TCOF1-211ENST00000513346 SH3RF1Q7Z6J0 888 aa11.86□□□□□ -0.51
TCOF1-211ENST00000513346 KCTD6Q8NC69 237 aa11.86□□□□□ -0.51
TCOF1-211ENST00000513346 NLRP4Q96MN2 994 aa11.86□□□□□ -0.51
TCOF1-211ENST00000513346 MANSC1Q9H8J5 431 aa11.86□□□□□ -0.51
TCOF1-211ENST00000513346 NXF1Q9UBU9 619 aaKnown RBP11.86□□□□□ -0.51
TCOF1-211ENST00000513346 NEU2Q9Y3R4 380 aa11.86□□□□□ -0.51
TCOF1-211ENST00000513346 RGL2O15211 777 aa11.85□□□□□ -0.51
TCOF1-211ENST00000513346 ITGA4P13612 1032 aa11.85□□□□□ -0.51
TCOF1-211ENST00000513346 MMP14P50281 582 aa11.85□□□□□ -0.51
TCOF1-211ENST00000513346 JAK3P52333 1124 aa11.85□□□□□ -0.51
TCOF1-211ENST00000513346 PEX3P56589 373 aa11.85□□□□□ -0.51
TCOF1-211ENST00000513346 SBK1Q52WX2 424 aa11.85□□□□□ -0.51
TCOF1-211ENST00000513346 TAF1BQ53T94 588 aaPredicted RBP11.85□□□□□ -0.51
TCOF1-211ENST00000513346 JADE1Q6IE81 842 aa11.85□□□□□ -0.51
TCOF1-211ENST00000513346 PPP1R18Q6NYC8 613 aa11.85□□□□□ -0.51
TCOF1-211ENST00000513346 ZBTB33Q86T24 672 aa11.85□□□□□ -0.51
TCOF1-211ENST00000513346 FAM81AQ8TBF8 368 aa11.85□□□□□ -0.51
TCOF1-211ENST00000513346 NMD3Q96D46 503 aaKnown RBP11.85□□□□□ -0.51
TCOF1-211ENST00000513346 CLMNQ96JQ2 1002 aa11.85□□□□□ -0.51
TCOF1-211ENST00000513346 CATSPER2Q96P56 530 aa11.85□□□□□ -0.51
TCOF1-211ENST00000513346 KCNK16Q96T55 309 aa11.85□□□□□ -0.51
TCOF1-211ENST00000513346 STRNO43815 780 aa11.85□□□□□ -0.51
TCOF1-211ENST00000513346 CPA2P48052 419 aa11.85□□□□□ -0.51
TCOF1-211ENST00000513346 CASP7P55210 303 aa11.85□□□□□ -0.51
TCOF1-211ENST00000513346 PTENP60484 403 aa11.85□□□□□ -0.51
TCOF1-211ENST00000513346 P3H1Q32P28 736 aa11.85□□□□□ -0.51
TCOF1-211ENST00000513346 KLC3Q6P597 504 aa11.85□□□□□ -0.51
TCOF1-211ENST00000513346 WDR59Q6PJI9 974 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms