RNA–Protein interactions for RNA: ENST00000513013.5

SUB1-212, Transcript of SUB1 homolog, transcriptional regulator, humanhuman

TSL 5

Gene SUB1, Length 493 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUB1-212ENST00000513013 TARDBPQ13148 414 aaKnown RBP eCLIP4.23□□□□□ -1.73
SUB1-212ENST00000513013 PLS1Q14651 629 aa4.23□□□□□ -1.73
SUB1-212ENST00000513013 TMEM200BQ69YZ2 307 aa4.23□□□□□ -1.73
SUB1-212ENST00000513013 CCDC174Q6PII3 467 aa4.23□□□□□ -1.73
SUB1-212ENST00000513013 GADL1Q6ZQY3 521 aa4.23□□□□□ -1.73
SUB1-212ENST00000513013 RSPH3Q86UC2 560 aa4.23□□□□□ -1.73
SUB1-212ENST00000513013 CIR1Q86X95 450 aaPredicted RBP4.23□□□□□ -1.73
SUB1-212ENST00000513013 SYTL1Q8IYJ3 562 aa4.23□□□□□ -1.73
SUB1-212ENST00000513013 FAM26EQ8N5C1 309 aa4.23□□□□□ -1.73
SUB1-212ENST00000513013 RNF152Q8N8N0 203 aa4.23□□□□□ -1.73
SUB1-212ENST00000513013 BRIX1Q8TDN6 353 aaKnown RBP4.23□□□□□ -1.73
SUB1-212ENST00000513013 SH3RF3Q8TEJ3 882 aaPredicted RBP4.23□□□□□ -1.73
SUB1-212ENST00000513013 ZNF480Q8WV37 535 aa4.23□□□□□ -1.73
SUB1-212ENST00000513013 SNX33Q8WV41 574 aa4.23□□□□□ -1.73
SUB1-212ENST00000513013 LTV1Q96GA3 475 aaPredicted RBP4.23□□□□□ -1.73
SUB1-212ENST00000513013 NT5C1BQ96P26 610 aa4.23□□□□□ -1.73
SUB1-212ENST00000513013 DMRTA2Q96SC8 542 aa4.23□□□□□ -1.73
SUB1-212ENST00000513013 TTLL2Q9BWV7 592 aa4.23□□□□□ -1.73
SUB1-212ENST00000513013 ARMT1Q9H993 441 aa4.23□□□□□ -1.73
SUB1-212ENST00000513013 BCO1Q9HAY6 547 aa4.23□□□□□ -1.73
SUB1-212ENST00000513013 BARX1Q9HBU1 254 aaPredicted RBP4.23□□□□□ -1.73
SUB1-212ENST00000513013 SARS2Q9NP81 518 aaKnown RBP4.23□□□□□ -1.73
SUB1-212ENST00000513013 JADE2Q9NQC1 790 aa4.23□□□□□ -1.73
SUB1-212ENST00000513013 PIH1D1Q9NWS0 290 aaKnown RBP4.23□□□□□ -1.73
SUB1-212ENST00000513013 C9orf78Q9NZ63 289 aaPredicted RBP4.23□□□□□ -1.73
SUB1-212ENST00000513013 SAE1Q9UBE0 346 aaPredicted RBP4.23□□□□□ -1.73
SUB1-212ENST00000513013 CDC23Q9UJX2 597 aa4.23□□□□□ -1.73
SUB1-212ENST00000513013 PAXBP1Q9Y5B6 917 aa4.23□□□□□ -1.73
SUB1-212ENST00000513013 A0A1W2PPC4 97 aa4.22□□□□□ -1.73
SUB1-212ENST00000513013 LRRC14BA6NHZ5 514 aa4.22□□□□□ -1.73
SUB1-212ENST00000513013 PRRT4C9JH25 899 aa4.22□□□□□ -1.73
SUB1-212ENST00000513013 APOL1O14791 398 aa4.22□□□□□ -1.73
SUB1-212ENST00000513013 SKAP2O75563 359 aaPredicted RBP4.22□□□□□ -1.73
SUB1-212ENST00000513013 CSTBP04080 98 aaKnown RBP4.22□□□□□ -1.73
SUB1-212ENST00000513013 CENPBP07199 599 aaPredicted RBP4.22□□□□□ -1.73
SUB1-212ENST00000513013 PARP1P09874 1014 aaKnown RBP4.22□□□□□ -1.73
SUB1-212ENST00000513013 BRAFP15056 766 aa4.22□□□□□ -1.73
SUB1-212ENST00000513013 ZNF28P17035 718 aa4.22□□□□□ -1.73
SUB1-212ENST00000513013 MALP21145 153 aa4.22□□□□□ -1.73
SUB1-212ENST00000513013 POLD1P28340 1107 aa4.22□□□□□ -1.73
SUB1-212ENST00000513013 SMARCA1P28370 1054 aa4.22□□□□□ -1.73
SUB1-212ENST00000513013 SLC6A9P48067 706 aa4.22□□□□□ -1.73
SUB1-212ENST00000513013 MAPK10P53779 464 aa4.22□□□□□ -1.73
SUB1-212ENST00000513013 WNT3AP56704 352 aa4.22□□□□□ -1.73
SUB1-212ENST00000513013 SESN2P58004 480 aaPredicted RBP4.22□□□□□ -1.73
SUB1-212ENST00000513013 PPP2CBP62714 309 aa4.22□□□□□ -1.73
SUB1-212ENST00000513013 PPP2CAP67775 309 aa4.22□□□□□ -1.73
SUB1-212ENST00000513013 CD83Q01151 205 aa4.22□□□□□ -1.73
SUB1-212ENST00000513013 FMO1Q01740 532 aa4.22□□□□□ -1.73
SUB1-212ENST00000513013 TLE1Q04724 770 aa4.22□□□□□ -1.73
SUB1-212ENST00000513013 LMOD3Q0VAK6 560 aa4.22□□□□□ -1.73
SUB1-212ENST00000513013 PPFIA1Q13136 1202 aa4.22□□□□□ -1.73
SUB1-212ENST00000513013 STARD3Q14849 445 aa4.22□□□□□ -1.73
SUB1-212ENST00000513013 PUM3Q15397 648 aaKnown RBP4.22□□□□□ -1.73
SUB1-212ENST00000513013 KHDC1Q4VXA5 237 aaKnown RBP4.22□□□□□ -1.73
SUB1-212ENST00000513013 CCDC38Q502W7 563 aa4.22□□□□□ -1.73
SUB1-212ENST00000513013 WDR78Q5VTH9 848 aa4.22□□□□□ -1.73
SUB1-212ENST00000513013 HIBCHQ6NVY1 386 aaPredicted RBP4.22□□□□□ -1.73
SUB1-212ENST00000513013 TMC5Q6UXY8 1006 aa4.22□□□□□ -1.73
SUB1-212ENST00000513013 ARHGEF18Q6ZSZ5 1173 aa4.22□□□□□ -1.73
SUB1-212ENST00000513013 TAS1R1Q7RTX1 841 aa4.22□□□□□ -1.73
SUB1-212ENST00000513013 LIMS2Q7Z4I7 341 aa4.22□□□□□ -1.73
SUB1-212ENST00000513013 COL23A1Q86Y22 540 aaPredicted RBP4.22□□□□□ -1.73
SUB1-212ENST00000513013 ANKRD18AQ8IVF6 992 aa4.22□□□□□ -1.73
SUB1-212ENST00000513013 NME8Q8N427 588 aa4.22□□□□□ -1.73
SUB1-212ENST00000513013 MYCT1Q8N699 235 aa4.22□□□□□ -1.73
SUB1-212ENST00000513013 ZNF527Q8NB42 609 aa4.22□□□□□ -1.73
SUB1-212ENST00000513013 IFI44Q8TCB0 444 aa4.22□□□□□ -1.73
SUB1-212ENST00000513013 KBTBD7Q8WVZ9 684 aa4.22□□□□□ -1.73
SUB1-212ENST00000513013 WDR92Q96MX6 357 aa4.22□□□□□ -1.73
SUB1-212ENST00000513013 SSBP3Q9BWW4 388 aaPredicted RBP4.22□□□□□ -1.73
SUB1-212ENST00000513013 EIF2AQ9BY44 585 aaKnown RBP4.22□□□□□ -1.73
SUB1-212ENST00000513013 KLC2Q9H0B6 622 aa4.22□□□□□ -1.73
SUB1-212ENST00000513013 DEF6Q9H4E7 631 aa4.22□□□□□ -1.73
SUB1-212ENST00000513013 C14orf93Q9H972 538 aaKnown RBP4.22□□□□□ -1.73
SUB1-212ENST00000513013 SERHLQ9NQF3 203 aa4.22□□□□□ -1.73
SUB1-212ENST00000513013 SAGE1Q9NXZ1 904 aa4.22□□□□□ -1.73
SUB1-212ENST00000513013 ABCF2Q9UG63 623 aa4.22□□□□□ -1.73
SUB1-212ENST00000513013 STAP2Q9UGK3 403 aa4.22□□□□□ -1.73
SUB1-212ENST00000513013 AFF4Q9UHB7 1163 aaKnown RBP4.22□□□□□ -1.73
SUB1-212ENST00000513013 FBXO9Q9UK97 447 aaPredicted RBP4.22□□□□□ -1.73
SUB1-212ENST00000513013 TCAF1Q9Y4C2 921 aa4.22□□□□□ -1.73
SUB1-212ENST00000513013 PCDHGB3Q9Y5G1 929 aa4.22□□□□□ -1.73
SUB1-212ENST00000513013 PCDHA3Q9Y5H8 950 aa4.22□□□□□ -1.73
SUB1-212ENST00000513013 A0A0G2JNJ9 132 aa4.21□□□□□ -1.74
SUB1-212ENST00000513013 GOLGA6L3A6NEY3 463 aa4.21□□□□□ -1.74
SUB1-212ENST00000513013 FFAR2O15552 330 aa4.21□□□□□ -1.74
SUB1-212ENST00000513013 B4GALT3O60512 393 aa4.21□□□□□ -1.74
SUB1-212ENST00000513013 PRAMEF4O60810 478 aa4.21□□□□□ -1.74
SUB1-212ENST00000513013 IL18BPO95998 194 aa4.21□□□□□ -1.74
SUB1-212ENST00000513013 GASTP01350 101 aa4.21□□□□□ -1.74
SUB1-212ENST00000513013 GAAP10253 952 aa4.21□□□□□ -1.74
SUB1-212ENST00000513013 NPR1P16066 1061 aa4.21□□□□□ -1.74
SUB1-212ENST00000513013 CASP2P42575 452 aa4.21□□□□□ -1.74
SUB1-212ENST00000513013 HSPA7P48741 367 aa4.21□□□□□ -1.74
SUB1-212ENST00000513013 EPHB4P54760 987 aa4.21□□□□□ -1.74
SUB1-212ENST00000513013 TBX2Q13207 712 aaPredicted RBP4.21□□□□□ -1.74
SUB1-212ENST00000513013 PMS2P11Q13670 270 aa4.21□□□□□ -1.74
SUB1-212ENST00000513013 MPEG1Q2M385 716 aa4.21□□□□□ -1.74
SUB1-212ENST00000513013 WDR72Q3MJ13 1102 aa4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms