RNA–Protein interactions for RNA: ENST00000512418.5

CCHCR1-229, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 4

Gene CCHCR1, Length 565 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-229ENST00000512418 ROR1Q01973 937 aa16.08■□□□□ 0.16
CCHCR1-229ENST00000512418 ANGPT1Q15389 498 aa16.08■□□□□ 0.16
CCHCR1-229ENST00000512418 PABPC1LQ4VXU2 614 aaKnown RBP16.08■□□□□ 0.16
CCHCR1-229ENST00000512418 VARS2Q5ST30 1063 aaKnown RBP16.08■□□□□ 0.16
CCHCR1-229ENST00000512418 PARM1Q6UWI2 310 aa16.08■□□□□ 0.16
CCHCR1-229ENST00000512418 ZPBP2Q6X784 338 aa16.08■□□□□ 0.16
CCHCR1-229ENST00000512418 ASCL5Q7RTU5 278 aa16.08■□□□□ 0.16
CCHCR1-229ENST00000512418 ZNF461Q8TAF7 563 aa16.08■□□□□ 0.16
CCHCR1-229ENST00000512418 LARSQ9P2J5 1176 aaKnown RBP16.08■□□□□ 0.16
CCHCR1-229ENST00000512418 NUB1Q9Y5A7 615 aa16.08■□□□□ 0.16
CCHCR1-229ENST00000512418 H0YCG3 227 aa16.07■□□□□ 0.16
CCHCR1-229ENST00000512418 CLDN3O15551 220 aa16.07■□□□□ 0.16
CCHCR1-229ENST00000512418 MEFVO15553 781 aaPredicted RBP16.07■□□□□ 0.16
CCHCR1-229ENST00000512418 PLA2G4BP0C869 781 aa16.07■□□□□ 0.16
CCHCR1-229ENST00000512418 MCM2P49736 904 aa16.07■□□□□ 0.16
CCHCR1-229ENST00000512418 TMEM119Q4V9L6 283 aa16.07■□□□□ 0.16
CCHCR1-229ENST00000512418 FRMD5Q7Z6J6 570 aa16.07■□□□□ 0.16
CCHCR1-229ENST00000512418 NPAS3Q8IXF0 933 aa16.07■□□□□ 0.16
CCHCR1-229ENST00000512418 ST13P5Q8NFI4 369 aaPredicted RBP16.07■□□□□ 0.16
CCHCR1-229ENST00000512418 ITFG1Q8TB96 612 aa16.07■□□□□ 0.16
CCHCR1-229ENST00000512418 NKD2Q969F2 451 aaPredicted RBP16.07■□□□□ 0.16
CCHCR1-229ENST00000512418 C18orf25Q96B23 403 aaPredicted RBP16.07■□□□□ 0.16
CCHCR1-229ENST00000512418 ZBTB45Q96K62 511 aaPredicted RBP16.07■□□□□ 0.16
CCHCR1-229ENST00000512418 AK8Q96MA6 479 aa16.07■□□□□ 0.16
CCHCR1-229ENST00000512418 PLIN2Q99541 437 aa16.07■□□□□ 0.16
CCHCR1-229ENST00000512418 RPP25Q9BUL9 199 aaKnown RBP16.07■□□□□ 0.16
CCHCR1-229ENST00000512418 UPF2Q9HAU5 1272 aaKnown RBP16.07■□□□□ 0.16
CCHCR1-229ENST00000512418 HCFC1R1Q9NWW0 138 aa16.07■□□□□ 0.16
CCHCR1-229ENST00000512418 DNMT3BQ9UBC3 853 aaKnown RBP16.07■□□□□ 0.16
CCHCR1-229ENST00000512418 MYH15Q9Y2K3 1946 aa16.07■□□□□ 0.16
CCHCR1-229ENST00000512418 PDCD11Q14690 1871 aaKnown RBP16.06■□□□□ 0.16
CCHCR1-229ENST00000512418 ARHGEF37A1IGU5 675 aa16.06■□□□□ 0.16
CCHCR1-229ENST00000512418 WDR27A2RRH5 827 aa16.06■□□□□ 0.16
CCHCR1-229ENST00000512418 H7C4K7 107 aa16.06■□□□□ 0.16
CCHCR1-229ENST00000512418 SLC26A4O43511 780 aa16.06■□□□□ 0.16
CCHCR1-229ENST00000512418 TBC1D4O60343 1298 aa16.06■□□□□ 0.16
CCHCR1-229ENST00000512418 ABLIM3O94929 683 aa16.06■□□□□ 0.16
CCHCR1-229ENST00000512418 CD2BP2O95400 341 aaKnown RBP16.06■□□□□ 0.16
CCHCR1-229ENST00000512418 ATF2P15336 505 aa16.06■□□□□ 0.16
CCHCR1-229ENST00000512418 ELF1P32519 619 aa16.06■□□□□ 0.16
CCHCR1-229ENST00000512418 GPC5P78333 572 aa16.06■□□□□ 0.16
CCHCR1-229ENST00000512418 MCL1Q07820 350 aa16.06■□□□□ 0.16
CCHCR1-229ENST00000512418 SLC10A6Q3KNW5 377 aa16.06■□□□□ 0.16
CCHCR1-229ENST00000512418 KCNN1Q92952 543 aa16.06■□□□□ 0.16
CCHCR1-229ENST00000512418 SHDQ96IW2 340 aa16.06■□□□□ 0.16
CCHCR1-229ENST00000512418 SUSD3Q96L08 255 aa16.06■□□□□ 0.16
CCHCR1-229ENST00000512418 ODF2LQ9ULJ1 636 aa16.06■□□□□ 0.16
CCHCR1-229ENST00000512418 SMC3Q9UQE7 1217 aa16.06■□□□□ 0.16
CCHCR1-229ENST00000512418 NOTCH4Q99466 2003 aa16.06■□□□□ 0.16
CCHCR1-229ENST00000512418 PRRG1O14668 218 aa16.05■□□□□ 0.16
CCHCR1-229ENST00000512418 LRG1P02750 347 aa16.05■□□□□ 0.16
CCHCR1-229ENST00000512418 RHOP08100 348 aa16.05■□□□□ 0.16
CCHCR1-229ENST00000512418 SCP2P22307 547 aa16.05■□□□□ 0.16
CCHCR1-229ENST00000512418 MCM4P33991 863 aa16.05■□□□□ 0.16
CCHCR1-229ENST00000512418 NCKAP1LP55160 1127 aa16.05■□□□□ 0.16
CCHCR1-229ENST00000512418 CACNB1Q02641 598 aaPredicted RBP16.05■□□□□ 0.16
CCHCR1-229ENST00000512418 MRPL58Q14197 206 aaKnown RBP16.05■□□□□ 0.16
CCHCR1-229ENST00000512418 SEZ6Q53EL9 994 aa16.05■□□□□ 0.16
CCHCR1-229ENST00000512418 BICD1Q96G01 975 aa16.05■□□□□ 0.16
CCHCR1-229ENST00000512418 PLEKHA5Q9HAU0 1116 aa16.05■□□□□ 0.16
CCHCR1-229ENST00000512418 AVENQ9NQS1 362 aaPredicted RBP16.05■□□□□ 0.16
CCHCR1-229ENST00000512418 FBXL5Q9UKA1 691 aa16.05■□□□□ 0.16
CCHCR1-229ENST00000512418 MRPS23Q9Y3D9 190 aaKnown RBP16.05■□□□□ 0.16
CCHCR1-229ENST00000512418 SIT1Q9Y3P8 196 aa16.05■□□□□ 0.16
CCHCR1-229ENST00000512418 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.05■□□□□ 0.16
CCHCR1-229ENST00000512418 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.05■□□□□ 0.16
CCHCR1-229ENST00000512418 NPHP3-ACAD11A0A0J9YXS1 232 aa16.04■□□□□ 0.16
CCHCR1-229ENST00000512418 BMP15O95972 392 aa16.04■□□□□ 0.16
CCHCR1-229ENST00000512418 CLTAP09496 248 aa16.04■□□□□ 0.16
CCHCR1-229ENST00000512418 CXCL8P10145 99 aa16.04■□□□□ 0.16
CCHCR1-229ENST00000512418 UBA7P41226 1012 aa16.04■□□□□ 0.16
CCHCR1-229ENST00000512418 MATR3P43243 847 aaKnown RBP eCLIP16.04■□□□□ 0.16
CCHCR1-229ENST00000512418 ARPP19P56211 112 aa16.04■□□□□ 0.16
CCHCR1-229ENST00000512418 STARD6P59095 220 aa16.04■□□□□ 0.16
CCHCR1-229ENST00000512418 PFKPQ01813 784 aa16.04■□□□□ 0.16
CCHCR1-229ENST00000512418 SLC5A9Q2M3M2 681 aa16.04■□□□□ 0.16
CCHCR1-229ENST00000512418 CTXN3Q4LDR2 81 aa16.04■□□□□ 0.16
CCHCR1-229ENST00000512418 ARSHQ5FYA8 562 aa16.04■□□□□ 0.16
CCHCR1-229ENST00000512418 TPGS2Q68CL5 300 aa16.04■□□□□ 0.16
CCHCR1-229ENST00000512418 ZNF280DQ6N043 979 aa16.04■□□□□ 0.16
CCHCR1-229ENST00000512418 HAUS6Q7Z4H7 955 aa16.04■□□□□ 0.16
CCHCR1-229ENST00000512418 TCEAL8Q8IYN2 117 aa16.04■□□□□ 0.16
CCHCR1-229ENST00000512418 APPL2Q8NEU8 664 aa16.04■□□□□ 0.16
CCHCR1-229ENST00000512418 PJA1Q8NG27 643 aa16.04■□□□□ 0.16
CCHCR1-229ENST00000512418 ING5Q8WYH8 240 aa16.04■□□□□ 0.16
CCHCR1-229ENST00000512418 CALML4Q96GE6 196 aa16.04■□□□□ 0.16
CCHCR1-229ENST00000512418 TBC1D32Q96NH3 1257 aa16.04■□□□□ 0.16
CCHCR1-229ENST00000512418 REEP2Q9BRK0 252 aa16.04■□□□□ 0.16
CCHCR1-229ENST00000512418 CYP4F11Q9HBI6 524 aa16.04■□□□□ 0.16
CCHCR1-229ENST00000512418 GDE1Q9NZC3 331 aa16.04■□□□□ 0.16
CCHCR1-229ENST00000512418 DLGAP2Q9P1A6 1054 aa16.04■□□□□ 0.16
CCHCR1-229ENST00000512418 TUBGCP4Q9UGJ1 667 aa16.04■□□□□ 0.16
CCHCR1-229ENST00000512418 RIF1Q5UIP0 2472 aaKnown RBP16.04■□□□□ 0.16
CCHCR1-229ENST00000512418 DCNP07585 359 aaKnown RBP16.03■□□□□ 0.16
CCHCR1-229ENST00000512418 PTPN2P17706 415 aa16.03■□□□□ 0.16
CCHCR1-229ENST00000512418 KYAT1Q16773 422 aa16.03■□□□□ 0.16
CCHCR1-229ENST00000512418 SPECC1Q5M775 1068 aa16.03■□□□□ 0.16
CCHCR1-229ENST00000512418 LARP1BQ659C4 914 aaKnown RBP16.03■□□□□ 0.16
CCHCR1-229ENST00000512418 BRAPQ7Z569 592 aa16.03■□□□□ 0.16
CCHCR1-229ENST00000512418 DDX12PQ92771 950 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms