RNA–Protein interactions for RNA: ENST00000511767.3

PDLIM5-216, Transcript of PDZ and LIM domain 5, humanhuman

TSL 5

Gene PDLIM5, Length 463 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-216ENST00000511767 SERTAD1Q9UHV2 236 aa17.57■□□□□ 0.4
PDLIM5-216ENST00000511767 CDH22Q9UJ99 828 aa17.57■□□□□ 0.4
PDLIM5-216ENST00000511767 AGO2Q9UKV8 859 aaKnown RBP17.57■□□□□ 0.4
PDLIM5-216ENST00000511767 EXOC7Q9UPT5 735 aa17.57■□□□□ 0.4
PDLIM5-216ENST00000511767 FAM237AA0A1B0GTK4 181 aa17.56■□□□□ 0.4
PDLIM5-216ENST00000511767 A0A1B0GVL5 298 aa17.56■□□□□ 0.4
PDLIM5-216ENST00000511767 LOC730098B7Z3J9 87 aa17.56■□□□□ 0.4
PDLIM5-216ENST00000511767 I3L4J1 428 aa17.56■□□□□ 0.4
PDLIM5-216ENST00000511767 TGM5O43548 720 aa17.56■□□□□ 0.4
PDLIM5-216ENST00000511767 TRAPPC3O43617 180 aa17.56■□□□□ 0.4
PDLIM5-216ENST00000511767 SLFN14P0C7P3 912 aa17.56■□□□□ 0.4
PDLIM5-216ENST00000511767 SPATA31D3P0C874 917 aa17.56■□□□□ 0.4
PDLIM5-216ENST00000511767 CYP3A5P20815 502 aa17.56■□□□□ 0.4
PDLIM5-216ENST00000511767 CASP1P29466 404 aa17.56■□□□□ 0.4
PDLIM5-216ENST00000511767 LRPAP1P30533 357 aa17.56■□□□□ 0.4
PDLIM5-216ENST00000511767 SSTR3P32745 418 aaPredicted RBP17.56■□□□□ 0.4
PDLIM5-216ENST00000511767 HOXD13P35453 343 aa17.56■□□□□ 0.4
PDLIM5-216ENST00000511767 EHHADHQ08426 723 aa17.56■□□□□ 0.4
PDLIM5-216ENST00000511767 ALCAMQ13740 583 aa17.56■□□□□ 0.4
PDLIM5-216ENST00000511767 CBX2Q14781 532 aaPredicted RBP17.56■□□□□ 0.4
PDLIM5-216ENST00000511767 ATAT1Q5SQI0 421 aa17.56■□□□□ 0.4
PDLIM5-216ENST00000511767 RARS2Q5T160 578 aaKnown RBP17.56■□□□□ 0.4
PDLIM5-216ENST00000511767 CES5AQ6NT32 575 aa17.56■□□□□ 0.4
PDLIM5-216ENST00000511767 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.56■□□□□ 0.4
PDLIM5-216ENST00000511767 SPATA31D4Q6ZUB0 917 aa17.56■□□□□ 0.4
PDLIM5-216ENST00000511767 GLIS3Q8NEA6 775 aa17.56■□□□□ 0.4
PDLIM5-216ENST00000511767 ZNF507Q8TCN5 953 aa17.56■□□□□ 0.4
PDLIM5-216ENST00000511767 HDAC7Q8WUI4 952 aa17.56■□□□□ 0.4
PDLIM5-216ENST00000511767 PYM1Q9BRP8 204 aaKnown RBP17.56■□□□□ 0.4
PDLIM5-216ENST00000511767 SCAND2PQ9GZW5 306 aaPredicted RBP17.56■□□□□ 0.4
PDLIM5-216ENST00000511767 BLZF1Q9H2G9 400 aa17.56■□□□□ 0.4
PDLIM5-216ENST00000511767 MAGEF1Q9HAY2 307 aa17.56■□□□□ 0.4
PDLIM5-216ENST00000511767 HPSEQ9Y251 543 aa17.56■□□□□ 0.4
PDLIM5-216ENST00000511767 CITO14578 2027 aa17.55■□□□□ 0.4
PDLIM5-216ENST00000511767 PVALEFA0A1B0GWK0 134 aa17.55■□□□□ 0.4
PDLIM5-216ENST00000511767 PI4K2BG5E9Z4 385 aa17.55■□□□□ 0.4
PDLIM5-216ENST00000511767 ADAM12O43184 909 aa17.55■□□□□ 0.4
PDLIM5-216ENST00000511767 ACTN4O43707 911 aaKnown RBP17.55■□□□□ 0.4
PDLIM5-216ENST00000511767 WEE2P0C1S8 567 aa17.55■□□□□ 0.4
PDLIM5-216ENST00000511767 AFMP43652 599 aa17.55■□□□□ 0.4
PDLIM5-216ENST00000511767 CUL4BQ13620 913 aa17.55■□□□□ 0.4
PDLIM5-216ENST00000511767 MRPL58Q14197 206 aaKnown RBP17.55■□□□□ 0.4
PDLIM5-216ENST00000511767 RSPO2Q6UXX9 243 aaPredicted RBP17.55■□□□□ 0.4
PDLIM5-216ENST00000511767 TMC5Q6UXY8 1006 aa17.55■□□□□ 0.4
PDLIM5-216ENST00000511767 EPM2AIP1Q7L775 607 aaPredicted RBP17.55■□□□□ 0.4
PDLIM5-216ENST00000511767 GPR149Q86SP6 731 aa17.55■□□□□ 0.4
PDLIM5-216ENST00000511767 ZSWIM2Q8NEG5 633 aa17.55■□□□□ 0.4
PDLIM5-216ENST00000511767 POMGNT1Q8WZA1 660 aa17.55■□□□□ 0.4
PDLIM5-216ENST00000511767 KIF12Q96FN5 646 aa17.55■□□□□ 0.4
PDLIM5-216ENST00000511767 PAGE5Q96GU1 130 aa17.55■□□□□ 0.4
PDLIM5-216ENST00000511767 ASB7Q9H672 318 aa17.55■□□□□ 0.4
PDLIM5-216ENST00000511767 TUBGCP4Q9UGJ1 667 aa17.55■□□□□ 0.4
PDLIM5-216ENST00000511767 UBQLN1Q9UMX0 589 aaKnown RBP17.55■□□□□ 0.4
PDLIM5-216ENST00000511767 TBC1D4O60343 1298 aa17.54■□□□□ 0.4
PDLIM5-216ENST00000511767 PAPLNO95428 1278 aa17.54■□□□□ 0.4
PDLIM5-216ENST00000511767 GLUD1P00367 558 aa17.54■□□□□ 0.4
PDLIM5-216ENST00000511767 PFKFB1P16118 471 aa17.54■□□□□ 0.4
PDLIM5-216ENST00000511767 GARTP22102 1010 aa17.54■□□□□ 0.4
PDLIM5-216ENST00000511767 TKTP29401 623 aaKnown RBP17.54■□□□□ 0.4
PDLIM5-216ENST00000511767 MTHFRP42898 656 aa17.54■□□□□ 0.4
PDLIM5-216ENST00000511767 ASIC1P78348 528 aa17.54■□□□□ 0.4
PDLIM5-216ENST00000511767 NUCB2P80303 420 aa17.54■□□□□ 0.4
PDLIM5-216ENST00000511767 CREMQ03060 361 aa17.54■□□□□ 0.4
PDLIM5-216ENST00000511767 PPP2R3AQ06190 1150 aa17.54■□□□□ 0.4
PDLIM5-216ENST00000511767 RAB33AQ14088 237 aa17.54■□□□□ 0.4
PDLIM5-216ENST00000511767 PSMD5Q16401 504 aa17.54■□□□□ 0.4
PDLIM5-216ENST00000511767 SPATA1Q5VX52 437 aa17.54■□□□□ 0.4
PDLIM5-216ENST00000511767 PDXDC1Q6P996 788 aa17.54■□□□□ 0.4
PDLIM5-216ENST00000511767 UNC13DQ70J99 1090 aa17.54■□□□□ 0.4
PDLIM5-216ENST00000511767 GLYCTKQ8IVS8 523 aa17.54■□□□□ 0.4
PDLIM5-216ENST00000511767 SYCP3Q8IZU3 236 aa17.54■□□□□ 0.4
PDLIM5-216ENST00000511767 CMASQ8NFW8 434 aaPredicted RBP17.54■□□□□ 0.4
PDLIM5-216ENST00000511767 FAM212AQ96EL1 285 aa17.54■□□□□ 0.4
PDLIM5-216ENST00000511767 NECTIN4Q96NY8 510 aa17.54■□□□□ 0.4
PDLIM5-216ENST00000511767 POP1Q99575 1024 aaKnown RBP17.54■□□□□ 0.4
PDLIM5-216ENST00000511767 PLEKHA4Q9H4M7 779 aa17.54■□□□□ 0.4
PDLIM5-216ENST00000511767 TMEM206Q9H813 350 aa17.54■□□□□ 0.4
PDLIM5-216ENST00000511767 GTF3C5Q9Y5Q8 519 aaPredicted RBP17.54■□□□□ 0.4
PDLIM5-216ENST00000511767 BACE2Q9Y5Z0 518 aa17.54■□□□□ 0.4
PDLIM5-216ENST00000511767 TCHHQ07283 1943 aa17.53■□□□□ 0.4
PDLIM5-216ENST00000511767 A0A1W2PQ27 194 aa17.53■□□□□ 0.4
PDLIM5-216ENST00000511767 A0A1W2PQ64 194 aa17.53■□□□□ 0.4
PDLIM5-216ENST00000511767 A0A1W2PQD8 194 aa17.53■□□□□ 0.4
PDLIM5-216ENST00000511767 JADE1Q6IE81 842 aa17.53■□□□□ 0.4
PDLIM5-216ENST00000511767 GRAMD1CQ8IYS0 662 aa17.53■□□□□ 0.4
PDLIM5-216ENST00000511767 RPGRIP1Q96KN7 1286 aa17.53■□□□□ 0.4
PDLIM5-216ENST00000511767 SUSD3Q96L08 255 aa17.53■□□□□ 0.4
PDLIM5-216ENST00000511767 RIPOR3Q96MK2 946 aa17.53■□□□□ 0.4
PDLIM5-216ENST00000511767 POMKQ9H5K3 350 aa17.53■□□□□ 0.4
PDLIM5-216ENST00000511767 SFXN1Q9H9B4 322 aa17.53■□□□□ 0.4
PDLIM5-216ENST00000511767 MAN1C1Q9NR34 630 aa17.53■□□□□ 0.4
PDLIM5-216ENST00000511767 DPP7Q9UHL4 492 aa17.53■□□□□ 0.4
PDLIM5-216ENST00000511767 USP25Q9UHP3 1055 aa17.53■□□□□ 0.4
PDLIM5-216ENST00000511767 DERAQ9Y315 318 aa17.53■□□□□ 0.4
PDLIM5-216ENST00000511767 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.52■□□□□ 0.4
PDLIM5-216ENST00000511767 CCDC195A0A1B0GUA6 201 aa17.52■□□□□ 0.4
PDLIM5-216ENST00000511767 PIRO00625 290 aa17.52■□□□□ 0.4
PDLIM5-216ENST00000511767 SYN3O14994 580 aa17.52■□□□□ 0.4
PDLIM5-216ENST00000511767 KLRC4O43908 158 aa17.52■□□□□ 0.4
PDLIM5-216ENST00000511767 LDHAP00338 332 aaKnown RBP17.52■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms