RNA–Protein interactions for RNA: ENST00000511739.1

USP38-203, Transcript of ubiquitin specific peptidase 38, humanhuman

TSL 2

Gene USP38, Length 6,376 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-203ENST00000511739 THAP9Q9H5L6 903 aa6.08□□□□□ -1.44
USP38-203ENST00000511739 AGO2Q9UKV8 859 aaKnown RBP6.08□□□□□ -1.44
USP38-203ENST00000511739 SNX9Q9Y5X1 595 aa6.08□□□□□ -1.44
USP38-203ENST00000511739 CACNA1FO60840 1977 aa6.08□□□□□ -1.44
USP38-203ENST00000511739 H0Y626 953 aa6.08□□□□□ -1.44
USP38-203ENST00000511739 PODXLO00592 558 aa6.08□□□□□ -1.44
USP38-203ENST00000511739 SH2B2O14492 632 aaPredicted RBP6.08□□□□□ -1.44
USP38-203ENST00000511739 FYNP06241 537 aa6.08□□□□□ -1.44
USP38-203ENST00000511739 CYP19A1P11511 503 aaPredicted RBP6.08□□□□□ -1.44
USP38-203ENST00000511739 PMS1P54277 932 aaKnown RBP6.08□□□□□ -1.44
USP38-203ENST00000511739 CDH6P55285 790 aa6.08□□□□□ -1.44
USP38-203ENST00000511739 HDAC4P56524 1084 aa6.08□□□□□ -1.44
USP38-203ENST00000511739 GPC5P78333 572 aa6.08□□□□□ -1.44
USP38-203ENST00000511739 TMED1Q13445 227 aa6.08□□□□□ -1.44
USP38-203ENST00000511739 MAPRE2Q15555 327 aa6.08□□□□□ -1.44
USP38-203ENST00000511739 ZSCAN26Q16670 478 aa6.08□□□□□ -1.44
USP38-203ENST00000511739 SUSD4Q5VX71 490 aa6.08□□□□□ -1.44
USP38-203ENST00000511739 ARRDC4Q8NCT1 418 aa6.08□□□□□ -1.44
USP38-203ENST00000511739 RIN2Q8WYP3 895 aaPredicted RBP6.08□□□□□ -1.44
USP38-203ENST00000511739 JADE3Q92613 823 aa6.08□□□□□ -1.44
USP38-203ENST00000511739 CD209Q9NNX6 404 aa6.08□□□□□ -1.44
USP38-203ENST00000511739 RRAGDQ9NQL2 400 aaPredicted RBP6.08□□□□□ -1.44
USP38-203ENST00000511739 NRBP1Q9UHY1 535 aa6.08□□□□□ -1.44
USP38-203ENST00000511739 TTC7AQ9ULT0 858 aaPredicted RBP6.08□□□□□ -1.44
USP38-203ENST00000511739 AGAP1Q9UPQ3 857 aa6.08□□□□□ -1.44
USP38-203ENST00000511739 CCDC195A0A1B0GUA6 201 aa6.08□□□□□ -1.44
USP38-203ENST00000511739 KDM4FA0A1W2PPD8 638 aa6.08□□□□□ -1.44
USP38-203ENST00000511739 APOL1O14791 398 aa6.08□□□□□ -1.44
USP38-203ENST00000511739 CHUKO15111 745 aa6.08□□□□□ -1.44
USP38-203ENST00000511739 CTIFO43310 598 aaKnown RBP6.08□□□□□ -1.44
USP38-203ENST00000511739 MMP1P03956 469 aa6.08□□□□□ -1.44
USP38-203ENST00000511739 PCSK1P29120 753 aa6.08□□□□□ -1.44
USP38-203ENST00000511739 SSTR3P32745 418 aaPredicted RBP6.08□□□□□ -1.44
USP38-203ENST00000511739 CPT1AP50416 773 aa6.08□□□□□ -1.44
USP38-203ENST00000511739 VAMP7P51809 220 aa6.08□□□□□ -1.44
USP38-203ENST00000511739 SLC16A1P53985 500 aa6.08□□□□□ -1.44
USP38-203ENST00000511739 ADCY2Q08462 1091 aa6.08□□□□□ -1.44
USP38-203ENST00000511739 STARD3Q14849 445 aa6.08□□□□□ -1.44
USP38-203ENST00000511739 ALFQ53S48 1182 aa6.08□□□□□ -1.44
USP38-203ENST00000511739 CHSY1Q86X52 802 aa6.08□□□□□ -1.44
USP38-203ENST00000511739 SFR1Q86XK3 245 aa6.08□□□□□ -1.44
USP38-203ENST00000511739 DGKHQ86XP1 1220 aa6.08□□□□□ -1.44
USP38-203ENST00000511739 DIS3LQ8TF46 1054 aaKnown RBP6.08□□□□□ -1.44
USP38-203ENST00000511739 ANKRD49Q8WVL7 239 aa6.08□□□□□ -1.44
USP38-203ENST00000511739 PNKPQ96T60 521 aa6.08□□□□□ -1.44
USP38-203ENST00000511739 MXD3Q9BW11 206 aa6.08□□□□□ -1.44
USP38-203ENST00000511739 PKD2L2Q9NZM6 624 aa6.08□□□□□ -1.44
USP38-203ENST00000511739 GTF2A1LQ9UNN4 478 aa6.08□□□□□ -1.44
USP38-203ENST00000511739 ATP11BQ9Y2G3 1177 aa6.08□□□□□ -1.44
USP38-203ENST00000511739 PRG3Q9Y2Y8 225 aaPredicted RBP6.08□□□□□ -1.44
USP38-203ENST00000511739 PCDHA10Q9Y5I2 948 aa6.08□□□□□ -1.44
USP38-203ENST00000511739 FHOD1Q9Y613 1164 aa6.08□□□□□ -1.44
USP38-203ENST00000511739 GGPS1O95749 300 aa6.07□□□□□ -1.44
USP38-203ENST00000511739 EIF3BP55884 814 aaKnown RBP6.07□□□□□ -1.44
USP38-203ENST00000511739 ETF1P62495 437 aaKnown RBP6.07□□□□□ -1.44
USP38-203ENST00000511739 RBP5P82980 135 aa6.07□□□□□ -1.44
USP38-203ENST00000511739 ZBED6P86452 979 aa6.07□□□□□ -1.44
USP38-203ENST00000511739 RBL2Q08999 1139 aa6.07□□□□□ -1.44
USP38-203ENST00000511739 MTMR2Q13614 643 aa6.07□□□□□ -1.44
USP38-203ENST00000511739 TXNRD1Q16881 649 aa6.07□□□□□ -1.44
USP38-203ENST00000511739 C10orf120Q5SQS8 335 aa6.07□□□□□ -1.44
USP38-203ENST00000511739 TDRD10Q5VZ19 366 aaKnown RBP6.07□□□□□ -1.44
USP38-203ENST00000511739 LRRC8EQ6NSJ5 796 aa6.07□□□□□ -1.44
USP38-203ENST00000511739 USP17L6PQ6QN14 398 aa6.07□□□□□ -1.44
USP38-203ENST00000511739 ENGASEQ8NFI3 743 aa6.07□□□□□ -1.44
USP38-203ENST00000511739 BHMTQ93088 406 aa6.07□□□□□ -1.44
USP38-203ENST00000511739 ATXN7L3BQ96GX2 97 aa6.07□□□□□ -1.44
USP38-203ENST00000511739 CCDC3Q9BQI4 270 aa6.07□□□□□ -1.44
USP38-203ENST00000511739 RWDD2AQ9UIY3 292 aa6.07□□□□□ -1.44
USP38-203ENST00000511739 ZNRF3Q9ULT6 936 aa6.07□□□□□ -1.44
USP38-203ENST00000511739 NOVA2Q9UNW9 492 aaKnown RBP6.07□□□□□ -1.44
USP38-203ENST00000511739 TBC1D12O60347 775 aa6.07□□□□□ -1.44
USP38-203ENST00000511739 CD4P01730 458 aa6.07□□□□□ -1.44
USP38-203ENST00000511739 FGGP02679 453 aa6.07□□□□□ -1.44
USP38-203ENST00000511739 GTF2E2P29084 291 aaKnown RBP6.07□□□□□ -1.44
USP38-203ENST00000511739 KPNA1P52294 538 aaPredicted RBP6.07□□□□□ -1.44
USP38-203ENST00000511739 TMEM62Q0P6H9 643 aa6.07□□□□□ -1.44
USP38-203ENST00000511739 GPD1LQ8N335 351 aa6.07□□□□□ -1.44
USP38-203ENST00000511739 MMGT1Q8N4V1 131 aa6.07□□□□□ -1.44
USP38-203ENST00000511739 SHCBP1Q8NEM2 672 aa6.07□□□□□ -1.44
USP38-203ENST00000511739 SLC7A14Q8TBB6 771 aa6.07□□□□□ -1.44
USP38-203ENST00000511739 USP33Q8TEY7 942 aa6.07□□□□□ -1.44
USP38-203ENST00000511739 MED15Q96RN5 788 aa6.07□□□□□ -1.44
USP38-203ENST00000511739 NHEJ1Q9H9Q4 299 aaPredicted RBP6.07□□□□□ -1.44
USP38-203ENST00000511739 JPH1Q9HDC5 661 aaPredicted RBP6.07□□□□□ -1.44
USP38-203ENST00000511739 UTP6Q9NYH9 597 aaKnown RBP6.07□□□□□ -1.44
USP38-203ENST00000511739 CD274Q9NZQ7 290 aa6.07□□□□□ -1.44
USP38-203ENST00000511739 ADAMTS1Q9UHI8 967 aa6.07□□□□□ -1.44
USP38-203ENST00000511739 NARFQ9UHQ1 456 aa6.07□□□□□ -1.44
USP38-203ENST00000511739 CDC23Q9UJX2 597 aa6.07□□□□□ -1.44
USP38-203ENST00000511739 APPL1Q9UKG1 709 aa6.07□□□□□ -1.44
USP38-203ENST00000511739 DIS3Q9Y2L1 958 aaKnown RBP6.07□□□□□ -1.44
USP38-203ENST00000511739 PCDHA13Q9Y5I0 950 aa6.07□□□□□ -1.44
USP38-203ENST00000511739 COL15A1P39059 1388 aa6.07□□□□□ -1.44
USP38-203ENST00000511739 A0A0G2JLW4 131 aa6.07□□□□□ -1.44
USP38-203ENST00000511739 HEATR9A2RTY3 570 aa6.07□□□□□ -1.44
USP38-203ENST00000511739 MIF4GDA9UHW6 222 aaKnown RBP6.07□□□□□ -1.44
USP38-203ENST00000511739 F5H6K3 240 aa6.07□□□□□ -1.44
USP38-203ENST00000511739 MAGEB2O15479 319 aa6.07□□□□□ -1.44
USP38-203ENST00000511739 WBP4O75554 376 aaKnown RBP6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms