RNA–Protein interactions for RNA: ENST00000511426.5

SCLT1-209, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 1,696 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-209ENST00000511426 XPOTO43592 962 aaKnown RBP16.34■□□□□ 0.21
SCLT1-209ENST00000511426 CASQ1P31415 396 aa16.34■□□□□ 0.21
SCLT1-209ENST00000511426 PDE6CP51160 858 aa16.34■□□□□ 0.21
SCLT1-209ENST00000511426 CYP27A1Q02318 531 aa16.34■□□□□ 0.21
SCLT1-209ENST00000511426 MGAT3Q09327 533 aa16.34■□□□□ 0.21
SCLT1-209ENST00000511426 TMEM132DQ14C87 1099 aa16.34■□□□□ 0.21
SCLT1-209ENST00000511426 FAM26DQ5JW98 314 aa16.34■□□□□ 0.21
SCLT1-209ENST00000511426 CDR2LQ86X02 465 aaPredicted RBP16.34■□□□□ 0.21
SCLT1-209ENST00000511426 SLC43A3Q8NBI5 491 aa16.34■□□□□ 0.21
SCLT1-209ENST00000511426 TMEM40Q8WWA1 233 aa16.34■□□□□ 0.21
SCLT1-209ENST00000511426 NIF3L1Q9GZT8 377 aa16.34■□□□□ 0.21
SCLT1-209ENST00000511426 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.34■□□□□ 0.21
SCLT1-209ENST00000511426 DNAI1Q9UI46 699 aa16.34■□□□□ 0.21
SCLT1-209ENST00000511426 R3HCC1Q9Y3T6 440 aaKnown RBP16.34■□□□□ 0.21
SCLT1-209ENST00000511426 PCDHB2Q9Y5E7 798 aa16.34■□□□□ 0.21
SCLT1-209ENST00000511426 PTCH2Q9Y6C5 1203 aa16.34■□□□□ 0.21
SCLT1-209ENST00000511426 GRIN2DO15399 1336 aa16.34■□□□□ 0.21
SCLT1-209ENST00000511426 A0A0A6YYK5 440 aaPredicted RBP16.34■□□□□ 0.21
SCLT1-209ENST00000511426 A0A0U1RQG5 324 aaPredicted RBP16.34■□□□□ 0.21
SCLT1-209ENST00000511426 LACTBL1A8MY62 500 aa16.34■□□□□ 0.21
SCLT1-209ENST00000511426 NPTXRO95502 500 aa16.34■□□□□ 0.21
SCLT1-209ENST00000511426 GZMAP12544 262 aa16.34■□□□□ 0.21
SCLT1-209ENST00000511426 P4HA1P13674 534 aa16.34■□□□□ 0.21
SCLT1-209ENST00000511426 TNFAIP3P21580 790 aa16.34■□□□□ 0.21
SCLT1-209ENST00000511426 OSTNP61366 133 aa16.34■□□□□ 0.21
SCLT1-209ENST00000511426 HTRA3P83110 453 aa16.34■□□□□ 0.21
SCLT1-209ENST00000511426 IFI16Q16666 785 aaKnown RBP16.34■□□□□ 0.21
SCLT1-209ENST00000511426 EPS8L1Q8TE68 723 aa16.34■□□□□ 0.21
SCLT1-209ENST00000511426 UBE2Q2Q8WVN8 375 aa16.34■□□□□ 0.21
SCLT1-209ENST00000511426 SECISBP2LQ93073 1101 aaKnown RBP16.34■□□□□ 0.21
SCLT1-209ENST00000511426 TATDN2Q93075 761 aa16.34■□□□□ 0.21
SCLT1-209ENST00000511426 SNX27Q96L92 541 aa16.34■□□□□ 0.21
SCLT1-209ENST00000511426 AGPAT1Q99943 283 aa16.34■□□□□ 0.21
SCLT1-209ENST00000511426 TRAIPQ9BWF2 469 aa16.34■□□□□ 0.21
SCLT1-209ENST00000511426 CNTN3Q9P232 1028 aa16.34■□□□□ 0.21
SCLT1-209ENST00000511426 PHF24Q9UPV7 400 aa16.34■□□□□ 0.21
SCLT1-209ENST00000511426 NOD1Q9Y239 953 aa16.34■□□□□ 0.21
SCLT1-209ENST00000511426 RALGAPA2Q2PPJ7 1873 aa16.33■□□□□ 0.2
SCLT1-209ENST00000511426 ANO9A1A5B4 782 aa16.33■□□□□ 0.2
SCLT1-209ENST00000511426 KBTBD13C9JR72 458 aa16.33■□□□□ 0.2
SCLT1-209ENST00000511426 DDX3XO00571 662 aaKnown RBP eCLIP16.33■□□□□ 0.22e-13■■□□□ 13
SCLT1-209ENST00000511426 RPS6KA5O75582 802 aa16.33■□□□□ 0.2
SCLT1-209ENST00000511426 ZNF699Q32M78 642 aa16.33■□□□□ 0.2
SCLT1-209ENST00000511426 JADE1Q6IE81 842 aa16.33■□□□□ 0.2
SCLT1-209ENST00000511426 FAM228AQ86W67 206 aa16.33■□□□□ 0.2
SCLT1-209ENST00000511426 TMEM192Q8IY95 271 aa16.33■□□□□ 0.2
SCLT1-209ENST00000511426 ALS2CR12Q96Q35 445 aa16.33■□□□□ 0.2
SCLT1-209ENST00000511426 GUCA1BQ9UMX6 200 aa16.33■□□□□ 0.2
SCLT1-209ENST00000511426 PTPN22Q9Y2R2 807 aa16.33■□□□□ 0.2
SCLT1-209ENST00000511426 TULP1O00294 542 aaPredicted RBP16.32■□□□□ 0.2
SCLT1-209ENST00000511426 DNM1LO00429 736 aa16.32■□□□□ 0.2
SCLT1-209ENST00000511426 TACC1O75410 805 aa16.32■□□□□ 0.2
SCLT1-209ENST00000511426 H2AFZP0C0S5 128 aa16.32■□□□□ 0.2
SCLT1-209ENST00000511426 HSPA6P17066 643 aa16.32■□□□□ 0.2
SCLT1-209ENST00000511426 FGFR4P22455 802 aa16.32■□□□□ 0.2
SCLT1-209ENST00000511426 XKR4Q5GH76 650 aa16.32■□□□□ 0.2
SCLT1-209ENST00000511426 ZNF569Q5MCW4 686 aa16.32■□□□□ 0.2
SCLT1-209ENST00000511426 H2AFVQ71UI9 128 aa16.32■□□□□ 0.2
SCLT1-209ENST00000511426 C1orf127Q8N9H9 656 aa16.32■□□□□ 0.2
SCLT1-209ENST00000511426 ZNF592Q92610 1267 aa16.32■□□□□ 0.2
SCLT1-209ENST00000511426 KAT5Q92993 513 aa16.32■□□□□ 0.2
SCLT1-209ENST00000511426 PI4K2AQ9BTU6 479 aa16.32■□□□□ 0.2
SCLT1-209ENST00000511426 LACRTQ9GZZ8 138 aa16.32■□□□□ 0.2
SCLT1-209ENST00000511426 XYLT2Q9H1B5 865 aa16.32■□□□□ 0.2
SCLT1-209ENST00000511426 L2HGDHQ9H9P8 463 aa16.32■□□□□ 0.2
SCLT1-209ENST00000511426 APOBEC3GQ9HC16 384 aaKnown RBP16.32■□□□□ 0.2
SCLT1-209ENST00000511426 NOCTQ9UK39 431 aaKnown RBP16.32■□□□□ 0.2
SCLT1-209ENST00000511426 CTAGE9A4FU28 777 aa16.31■□□□□ 0.2
SCLT1-209ENST00000511426 CST3P01034 146 aaPredicted RBP16.31■□□□□ 0.2
SCLT1-209ENST00000511426 NFICP08651 508 aa16.31■□□□□ 0.2
SCLT1-209ENST00000511426 PNMA6AP0CW24 399 aaPredicted RBP16.31■□□□□ 0.2
SCLT1-209ENST00000511426 CYP11B1P15538 503 aa16.31■□□□□ 0.2
SCLT1-209ENST00000511426 RAB27AP51159 221 aa16.31■□□□□ 0.2
SCLT1-209ENST00000511426 RBP5P82980 135 aa16.31■□□□□ 0.2
SCLT1-209ENST00000511426 CDR2Q01850 454 aa16.31■□□□□ 0.2
SCLT1-209ENST00000511426 ALKAL1Q6UXT8 129 aa16.31■□□□□ 0.2
SCLT1-209ENST00000511426 TRIM72Q6ZMU5 477 aa16.31■□□□□ 0.2
SCLT1-209ENST00000511426 BEST2Q8NFU1 509 aa16.31■□□□□ 0.2
SCLT1-209ENST00000511426 NOX5Q96PH1 765 aa16.31■□□□□ 0.2
SCLT1-209ENST00000511426 CYP3A43Q9HB55 503 aa16.31■□□□□ 0.2
SCLT1-209ENST00000511426 PAK6Q9NQU5 681 aaPredicted RBP16.31■□□□□ 0.2
SCLT1-209ENST00000511426 STARD7Q9NQZ5 370 aa16.31■□□□□ 0.2
SCLT1-209ENST00000511426 WBP1LQ9NX94 342 aa16.31■□□□□ 0.2
SCLT1-209ENST00000511426 UBQLN1Q9UMX0 589 aaKnown RBP16.31■□□□□ 0.2
SCLT1-209ENST00000511426 NOC2LQ9Y3T9 749 aaKnown RBP16.31■□□□□ 0.2
SCLT1-209ENST00000511426 NUB1Q9Y5A7 615 aa16.31■□□□□ 0.2
SCLT1-209ENST00000511426 A0A1W2PQ45 241 aaPredicted RBP16.3■□□□□ 0.2
SCLT1-209ENST00000511426 A0A1W2PQY0 241 aa16.3■□□□□ 0.2
SCLT1-209ENST00000511426 CYP26A1O43174 497 aa16.3■□□□□ 0.2
SCLT1-209ENST00000511426 CD4P01730 458 aa16.3■□□□□ 0.2
SCLT1-209ENST00000511426 CHRNA1P02708 482 aa16.3■□□□□ 0.2
SCLT1-209ENST00000511426 MYCNP04198 464 aaPredicted RBP16.3■□□□□ 0.2
SCLT1-209ENST00000511426 SKIP12755 728 aa16.3■□□□□ 0.2
SCLT1-209ENST00000511426 KRT5P13647 590 aa16.3■□□□□ 0.2
SCLT1-209ENST00000511426 KCNE1P15382 129 aa16.3■□□□□ 0.2
SCLT1-209ENST00000511426 CYP3A5P20815 502 aa16.3■□□□□ 0.2
SCLT1-209ENST00000511426 ACO1P21399 889 aaKnown RBP16.3■□□□□ 0.2
SCLT1-209ENST00000511426 USP8P40818 1118 aa16.3■□□□□ 0.2
SCLT1-209ENST00000511426 MYL6P60660 151 aa16.3■□□□□ 0.2
SCLT1-209ENST00000511426 ZBTB6Q15916 424 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms