RNA–Protein interactions for RNA: ENST00000511198.5

GYPB-212, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 444 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-212ENST00000511198 ZNF804BA4D1E1 1349 aa6.98□□□□□ -1.29
GYPB-212ENST00000511198 VPS13AQ96RL7 3174 aa6.98□□□□□ -1.29
GYPB-212ENST00000511198 ATRNL1Q5VV63 1379 aa6.97□□□□□ -1.29
GYPB-212ENST00000511198 GVINP1Q7Z2Y8 2422 aa6.97□□□□□ -1.29
GYPB-212ENST00000511198 PRAMEF25A6NGN4 478 aa6.97□□□□□ -1.29
GYPB-212ENST00000511198 TNPO2O14787 897 aaKnown RBP6.97□□□□□ -1.29
GYPB-212ENST00000511198 MPIG6BO95866 241 aa6.97□□□□□ -1.29
GYPB-212ENST00000511198 INSRRP14616 1297 aa6.97□□□□□ -1.29
GYPB-212ENST00000511198 ZNF20P17024 532 aa6.97□□□□□ -1.29
GYPB-212ENST00000511198 MC4RP32245 332 aa6.97□□□□□ -1.29
GYPB-212ENST00000511198 TOP3AQ13472 1001 aaPredicted RBP6.97□□□□□ -1.29
GYPB-212ENST00000511198 SNAPC2Q13487 334 aa6.97□□□□□ -1.29
GYPB-212ENST00000511198 MOGSQ13724 837 aa6.97□□□□□ -1.29
GYPB-212ENST00000511198 ICAM4Q14773 271 aa6.97□□□□□ -1.29
GYPB-212ENST00000511198 ANKRD23Q86SG2 305 aa6.97□□□□□ -1.29
GYPB-212ENST00000511198 DNERQ8NFT8 737 aa6.97□□□□□ -1.29
GYPB-212ENST00000511198 DDX55Q8NHQ9 600 aaKnown RBP eCLIP6.97□□□□□ -1.295e-10■□□□□ 9.2
GYPB-212ENST00000511198 HERVK_113Q902F9 699 aa6.97□□□□□ -1.29
GYPB-212ENST00000511198 GPR20Q99678 358 aa6.97□□□□□ -1.29
GYPB-212ENST00000511198 CD248Q9HCU0 757 aa6.97□□□□□ -1.29
GYPB-212ENST00000511198 ALG13Q9NP73 1137 aaKnown RBP6.97□□□□□ -1.29
GYPB-212ENST00000511198 INCENPQ9NQS7 918 aa6.97□□□□□ -1.29
GYPB-212ENST00000511198 GALNT8Q9NY28 637 aa6.97□□□□□ -1.29
GYPB-212ENST00000511198 FAM186AA6NE01 2351 aa6.97□□□□□ -1.29
GYPB-212ENST00000511198 CLSPNQ9HAW4 1339 aa6.97□□□□□ -1.29
GYPB-212ENST00000511198 FAM208BQ5VWN6 2430 aa6.96□□□□□ -1.3
GYPB-212ENST00000511198 ASPMQ8IZT6 3477 aa6.96□□□□□ -1.3
GYPB-212ENST00000511198 ESYT3A0FGR9 886 aa6.96□□□□□ -1.3
GYPB-212ENST00000511198 CLRN2A0PK11 232 aa6.96□□□□□ -1.3
GYPB-212ENST00000511198 TRIM43BA6NCK2 446 aa6.96□□□□□ -1.3
GYPB-212ENST00000511198 SCDO00767 359 aa6.96□□□□□ -1.3
GYPB-212ENST00000511198 HMGCRP04035 888 aa6.96□□□□□ -1.3
GYPB-212ENST00000511198 ZNF888P0CJ79 500 aaPredicted RBP6.96□□□□□ -1.3
GYPB-212ENST00000511198 IL13RA1P78552 427 aa6.96□□□□□ -1.3
GYPB-212ENST00000511198 TEFQ10587 303 aa6.96□□□□□ -1.3
GYPB-212ENST00000511198 STILQ15468 1287 aa6.96□□□□□ -1.3
GYPB-212ENST00000511198 ST3GAL2Q16842 350 aa6.96□□□□□ -1.3
GYPB-212ENST00000511198 CIR1Q86X95 450 aaPredicted RBP6.96□□□□□ -1.3
GYPB-212ENST00000511198 TRIM43Q96BQ3 446 aaPredicted RBP6.96□□□□□ -1.3
GYPB-212ENST00000511198 BORCS6Q96GS4 357 aa6.96□□□□□ -1.3
GYPB-212ENST00000511198 CLUHP3Q96NS8 147 aa6.96□□□□□ -1.3
GYPB-212ENST00000511198 UTP14AQ9BVJ6 771 aaKnown RBP6.96□□□□□ -1.3
GYPB-212ENST00000511198 AMNQ9BXJ7 453 aa6.96□□□□□ -1.3
GYPB-212ENST00000511198 KRTAP4-5Q9BYR2 181 aa6.96□□□□□ -1.3
GYPB-212ENST00000511198 JADE2Q9NQC1 790 aa6.96□□□□□ -1.3
GYPB-212ENST00000511198 MYRFQ9Y2G1 1151 aa6.96□□□□□ -1.3
GYPB-212ENST00000511198 CACNA1HO95180 2353 aa6.96□□□□□ -1.3
GYPB-212ENST00000511198 PLD2O14939 933 aa6.95□□□□□ -1.3
GYPB-212ENST00000511198 CUTAO60888 179 aa6.95□□□□□ -1.3
GYPB-212ENST00000511198 UFL1O94874 794 aa6.95□□□□□ -1.3
GYPB-212ENST00000511198 SNRPA1P09661 255 aaKnown RBP6.95□□□□□ -1.3
GYPB-212ENST00000511198 SQSTM1Q13501 440 aa6.95□□□□□ -1.3
GYPB-212ENST00000511198 BMS1Q14692 1282 aaKnown RBP6.95□□□□□ -1.3
GYPB-212ENST00000511198 MAP3K21Q5TCX8 1036 aa6.95□□□□□ -1.3
GYPB-212ENST00000511198 CHST13Q8NET6 341 aa6.95□□□□□ -1.3
GYPB-212ENST00000511198 DLG3Q92796 817 aa6.95□□□□□ -1.3
GYPB-212ENST00000511198 CARD11Q9BXL7 1154 aa6.95□□□□□ -1.3
GYPB-212ENST00000511198 SEC61A2Q9H9S3 476 aa6.95□□□□□ -1.3
GYPB-212ENST00000511198 COG5Q9UP83 839 aa6.95□□□□□ -1.3
GYPB-212ENST00000511198 ATP11BQ9Y2G3 1177 aa6.95□□□□□ -1.3
GYPB-212ENST00000511198 B3GALT1Q9Y5Z6 326 aa6.95□□□□□ -1.3
GYPB-212ENST00000511198 PRRC2BQ5JSZ5 2229 aaKnown RBP6.95□□□□□ -1.3
GYPB-212ENST00000511198 PATE3B3GLJ2 98 aa6.94□□□□□ -1.3
GYPB-212ENST00000511198 C1QTNF3-AMACRE9PGA6 284 aa6.94□□□□□ -1.3
GYPB-212ENST00000511198 DCXO43602 365 aa6.94□□□□□ -1.3
GYPB-212ENST00000511198 NPTXRO95502 500 aa6.94□□□□□ -1.3
GYPB-212ENST00000511198 MMEP08473 750 aa6.94□□□□□ -1.3
GYPB-212ENST00000511198 PPIL2Q13356 520 aa6.94□□□□□ -1.3
GYPB-212ENST00000511198 USP10Q14694 798 aaKnown RBP6.94□□□□□ -1.3
GYPB-212ENST00000511198 NFE2L2Q16236 605 aa6.94□□□□□ -1.3
GYPB-212ENST00000511198 PARP10Q53GL7 1025 aa6.94□□□□□ -1.3
GYPB-212ENST00000511198 CXXC5Q7LFL8 322 aaKnown RBP6.94□□□□□ -1.3
GYPB-212ENST00000511198 ERO1BQ86YB8 467 aa6.94□□□□□ -1.3
GYPB-212ENST00000511198 IGSF22Q8N9C0 903 aa6.94□□□□□ -1.3
GYPB-212ENST00000511198 GOLGA6L2Q8N9W4 650 aaPredicted RBP6.94□□□□□ -1.3
GYPB-212ENST00000511198 ASB15Q8WXK1 588 aa6.94□□□□□ -1.3
GYPB-212ENST00000511198 ZKSCAN4Q969J2 545 aaPredicted RBP6.94□□□□□ -1.3
GYPB-212ENST00000511198 PRMT6Q96LA8 375 aaPredicted RBP6.94□□□□□ -1.3
GYPB-212ENST00000511198 WWC2-AS2Q96NR7 200 aa6.94□□□□□ -1.3
GYPB-212ENST00000511198 KANSL2Q9H9L4 492 aa6.94□□□□□ -1.3
GYPB-212ENST00000511198 KCNH7Q9NS40 1196 aa6.94□□□□□ -1.3
GYPB-212ENST00000511198 UCKL1Q9NWZ5 548 aa6.94□□□□□ -1.3
GYPB-212ENST00000511198 GJD2Q9UKL4 321 aa6.94□□□□□ -1.3
GYPB-212ENST00000511198 NAV2Q8IVL1 2488 aa6.93□□□□□ -1.3
GYPB-212ENST00000511198 A0A0G2JMZ2 1700 aa6.93□□□□□ -1.3
GYPB-212ENST00000511198 PROB1E7EW31 1015 aa6.93□□□□□ -1.3
GYPB-212ENST00000511198 SDHAP31040 664 aa6.93□□□□□ -1.3
GYPB-212ENST00000511198 MMP14P50281 582 aa6.93□□□□□ -1.3
GYPB-212ENST00000511198 PUM1Q14671 1186 aaKnown RBP eCLIP6.93□□□□□ -1.3
GYPB-212ENST00000511198 DLGAP5Q15398 846 aa6.93□□□□□ -1.3
GYPB-212ENST00000511198 CDSNQ15517 529 aa6.93□□□□□ -1.3
GYPB-212ENST00000511198 WDR72Q3MJ13 1102 aa6.93□□□□□ -1.3
GYPB-212ENST00000511198 TMEM177Q53S58 311 aa6.93□□□□□ -1.3
GYPB-212ENST00000511198 STRIP1Q5VSL9 837 aa6.93□□□□□ -1.3
GYPB-212ENST00000511198 LRSAM1Q6UWE0 723 aa6.93□□□□□ -1.3
GYPB-212ENST00000511198 CCDC129Q6ZRS4 1044 aa6.93□□□□□ -1.3
GYPB-212ENST00000511198 TRIB2Q92519 343 aa6.93□□□□□ -1.3
GYPB-212ENST00000511198 DVL3Q92997 716 aaPredicted RBP6.93□□□□□ -1.3
GYPB-212ENST00000511198 BTBD2Q9BX70 525 aa6.93□□□□□ -1.3
GYPB-212ENST00000511198 ZDHHC5Q9C0B5 715 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms