RNA–Protein interactions for RNA: ENST00000509989.5

SNF8-206, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 3

Gene SNF8, Length 677 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-206ENST00000509989 EFCAB13Q8IY85 973 aa14.77□□□□□ -0.05
SNF8-206ENST00000509989 SMRP1Q8NCR6 262 aa14.77□□□□□ -0.05
SNF8-206ENST00000509989 KIAA0895Q8NCT3 520 aa14.77□□□□□ -0.05
SNF8-206ENST00000509989 LNX1Q8TBB1 728 aaPredicted RBP14.77□□□□□ -0.05
SNF8-206ENST00000509989 ZNF507Q8TCN5 953 aa14.77□□□□□ -0.05
SNF8-206ENST00000509989 POMGNT1Q8WZA1 660 aa14.77□□□□□ -0.05
SNF8-206ENST00000509989 ERCC4Q92889 916 aaPredicted RBP14.77□□□□□ -0.05
SNF8-206ENST00000509989 HVCN1Q96D96 273 aa14.77□□□□□ -0.05
SNF8-206ENST00000509989 KIF12Q96FN5 646 aa14.77□□□□□ -0.05
SNF8-206ENST00000509989 UHRF1Q96T88 793 aaPredicted RBP14.77□□□□□ -0.05
SNF8-206ENST00000509989 FAM213AQ9BRX8 229 aa14.77□□□□□ -0.05
SNF8-206ENST00000509989 RPF1Q9H9Y2 349 aaKnown RBP14.77□□□□□ -0.05
SNF8-206ENST00000509989 RXFP1Q9HBX9 757 aa14.77□□□□□ -0.05
SNF8-206ENST00000509989 MRPL17Q9NRX2 175 aaKnown RBP14.77□□□□□ -0.05
SNF8-206ENST00000509989 ATP6V1DQ9Y5K8 247 aa14.77□□□□□ -0.05
SNF8-206ENST00000509989 CLIC2O15247 247 aa14.76□□□□□ -0.05
SNF8-206ENST00000509989 ZNF202O95125 648 aa14.76□□□□□ -0.05
SNF8-206ENST00000509989 URODP06132 367 aa14.76□□□□□ -0.05
SNF8-206ENST00000509989 USP41Q3LFD5 358 aa14.76□□□□□ -0.05
SNF8-206ENST00000509989 DCLRE1AQ6PJP8 1040 aa14.76□□□□□ -0.05
SNF8-206ENST00000509989 KRBA2Q6ZNG9 492 aa14.76□□□□□ -0.05
SNF8-206ENST00000509989 CEP57L1Q8IYX8 460 aa14.76□□□□□ -0.05
SNF8-206ENST00000509989 SYCP3Q8IZU3 236 aa14.76□□□□□ -0.05
SNF8-206ENST00000509989 NOC3LQ8WTT2 800 aaKnown RBP14.76□□□□□ -0.05
SNF8-206ENST00000509989 PPP2R3CQ969Q6 453 aa14.76□□□□□ -0.05
SNF8-206ENST00000509989 CDCA3Q99618 268 aaPredicted RBP14.76□□□□□ -0.05
SNF8-206ENST00000509989 CLSTN3Q9BQT9 956 aa14.76□□□□□ -0.05
SNF8-206ENST00000509989 USP15Q9Y4E8 981 aaPredicted RBP14.76□□□□□ -0.05
SNF8-206ENST00000509989 PCDHB13Q9Y5F0 798 aa14.76□□□□□ -0.05
SNF8-206ENST00000509989 MYO10Q9HD67 2058 aa14.76□□□□□ -0.05
SNF8-206ENST00000509989 NOTCH4Q99466 2003 aa14.76□□□□□ -0.05
SNF8-206ENST00000509989 MUC3AQ02505 3323 aa14.75□□□□□ -0.05
SNF8-206ENST00000509989 SF3B1O75533 1304 aaKnown RBP eCLIP14.75□□□□□ -0.05
SNF8-206ENST00000509989 PTPRJQ12913 1337 aa14.75□□□□□ -0.05
SNF8-206ENST00000509989 TMEM189-UBE2V1I3L0A0 370 aa14.75□□□□□ -0.05
SNF8-206ENST00000509989 TULP1O00294 542 aaPredicted RBP14.75□□□□□ -0.05
SNF8-206ENST00000509989 SPTLC1O15269 473 aa14.75□□□□□ -0.05
SNF8-206ENST00000509989 NCK2O43639 380 aa14.75□□□□□ -0.05
SNF8-206ENST00000509989 NR1I2O75469 434 aa14.75□□□□□ -0.05
SNF8-206ENST00000509989 FGFR3P22607 806 aa14.75□□□□□ -0.05
SNF8-206ENST00000509989 KLRC2P26717 231 aa14.75□□□□□ -0.05
SNF8-206ENST00000509989 AMPD3Q01432 767 aa14.75□□□□□ -0.05
SNF8-206ENST00000509989 PPP2R3AQ06190 1150 aa14.75□□□□□ -0.05
SNF8-206ENST00000509989 SNW1Q13573 536 aaKnown RBP14.75□□□□□ -0.05
SNF8-206ENST00000509989 AAK1Q2M2I8 961 aa14.75□□□□□ -0.05
SNF8-206ENST00000509989 RARS2Q5T160 578 aaKnown RBP14.75□□□□□ -0.05
SNF8-206ENST00000509989 LMBRD2Q68DH5 695 aaPredicted RBP14.75□□□□□ -0.05
SNF8-206ENST00000509989 CBWD2Q8IUF1 395 aa14.75□□□□□ -0.05
SNF8-206ENST00000509989 FMR1NBQ8N0W7 255 aaPredicted RBP14.75□□□□□ -0.05
SNF8-206ENST00000509989 ENGASEQ8NFI3 743 aa14.75□□□□□ -0.05
SNF8-206ENST00000509989 DDX27Q96GQ7 796 aaKnown RBP14.75□□□□□ -0.05
SNF8-206ENST00000509989 MAGEF1Q9HAY2 307 aa14.75□□□□□ -0.05
SNF8-206ENST00000509989 PVALEFA0A1B0GWK0 134 aa14.74□□□□□ -0.05
SNF8-206ENST00000509989 SCP2P22307 547 aa14.74□□□□□ -0.05
SNF8-206ENST00000509989 SP100P23497 879 aaPredicted RBP14.74□□□□□ -0.05
SNF8-206ENST00000509989 CDR1P51861 262 aa14.74□□□□□ -0.05
SNF8-206ENST00000509989 DPYDQ12882 1025 aa14.74□□□□□ -0.05
SNF8-206ENST00000509989 SMAD4Q13485 552 aaKnown RBP14.74□□□□□ -0.05
SNF8-206ENST00000509989 SMAD2Q15796 467 aaKnown RBP14.74□□□□□ -0.05
SNF8-206ENST00000509989 PSMD5Q16401 504 aa14.74□□□□□ -0.05
SNF8-206ENST00000509989 SLFN12LQ6IEE8 588 aa14.74□□□□□ -0.05
SNF8-206ENST00000509989 KIAA1841Q6NSI8 718 aa14.74□□□□□ -0.05
SNF8-206ENST00000509989 TMC5Q6UXY8 1006 aa14.74□□□□□ -0.05
SNF8-206ENST00000509989 SUSD6Q92537 303 aa14.74□□□□□ -0.05
SNF8-206ENST00000509989 TTPALQ9BTX7 342 aa14.74□□□□□ -0.05
SNF8-206ENST00000509989 LRRC27Q9C0I9 530 aa14.74□□□□□ -0.05
SNF8-206ENST00000509989 PLEKHA5Q9HAU0 1116 aa14.74□□□□□ -0.05
SNF8-206ENST00000509989 PDE11AQ9HCR9 933 aa14.74□□□□□ -0.05
SNF8-206ENST00000509989 SLC38A7Q9NVC3 462 aa14.74□□□□□ -0.05
SNF8-206ENST00000509989 TIMM13Q9Y5L4 95 aaPredicted RBP14.74□□□□□ -0.05
SNF8-206ENST00000509989 DOCK8Q8NF50 2099 aa14.73□□□□□ -0.05
SNF8-206ENST00000509989 TGM5O43548 720 aa14.73□□□□□ -0.05
SNF8-206ENST00000509989 RFPL2O75678 378 aa14.73□□□□□ -0.05
SNF8-206ENST00000509989 RPN1P04843 607 aaKnown RBP14.73□□□□□ -0.05
SNF8-206ENST00000509989 LRPAP1P30533 357 aa14.73□□□□□ -0.05
SNF8-206ENST00000509989 ZP2Q05996 745 aa14.73□□□□□ -0.05
SNF8-206ENST00000509989 PNOCQ13519 176 aa14.73□□□□□ -0.05
SNF8-206ENST00000509989 SPATA1Q5VX52 437 aa14.73□□□□□ -0.05
SNF8-206ENST00000509989 ARMCX5Q6P1M9 558 aa14.73□□□□□ -0.05
SNF8-206ENST00000509989 LILRA6Q6PI73 481 aa14.73□□□□□ -0.05
SNF8-206ENST00000509989 RDH13Q8NBN7 331 aa14.73□□□□□ -0.05
SNF8-206ENST00000509989 PIK3R5Q8WYR1 880 aa14.73□□□□□ -0.05
SNF8-206ENST00000509989 CASP10Q92851 521 aa14.73□□□□□ -0.05
SNF8-206ENST00000509989 FBXL18Q96ME1 805 aa14.73□□□□□ -0.05
SNF8-206ENST00000509989 UROC1Q96N76 676 aa14.73□□□□□ -0.05
SNF8-206ENST00000509989 GZF1Q9H116 711 aaPredicted RBP14.73□□□□□ -0.05
SNF8-206ENST00000509989 MAN1C1Q9NR34 630 aa14.73□□□□□ -0.05
SNF8-206ENST00000509989 AGPAT3Q9NRZ7 376 aa14.73□□□□□ -0.05
SNF8-206ENST00000509989 UBQLN1Q9UMX0 589 aaKnown RBP14.73□□□□□ -0.05
SNF8-206ENST00000509989 EXOC7Q9UPT5 735 aa14.73□□□□□ -0.05
SNF8-206ENST00000509989 CARNS1A5YM72 827 aa14.72□□□□□ -0.05
SNF8-206ENST00000509989 EIF3DO15371 548 aaKnown RBP eCLIP14.72□□□□□ -0.05
SNF8-206ENST00000509989 GARTP22102 1010 aa14.72□□□□□ -0.05
SNF8-206ENST00000509989 MCM4P33991 863 aa14.72□□□□□ -0.05
SNF8-206ENST00000509989 ALCAMQ13740 583 aa14.72□□□□□ -0.05
SNF8-206ENST00000509989 TMEM132DQ14C87 1099 aa14.72□□□□□ -0.05
SNF8-206ENST00000509989 BMT2Q1RMZ1 405 aa14.72□□□□□ -0.05
SNF8-206ENST00000509989 C9orf57Q5W0N0 161 aa14.72□□□□□ -0.05
SNF8-206ENST00000509989 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.72□□□□□ -0.05
SNF8-206ENST00000509989 BRSK2Q8IWQ3 736 aa14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms