RNA–Protein interactions for RNA: ENST00000508465.5

NUP54-206, Transcript of nucleoporin 54, humanhuman

TSL 3

Gene NUP54, Length 744 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-206ENST00000508465 TAX1BP1Q86VP1 789 aa5.42□□□□□ -1.54
NUP54-206ENST00000508465 METTL16Q86W50 562 aaKnown RBP5.42□□□□□ -1.54
NUP54-206ENST00000508465 SLC44A5Q8NCS7 719 aa5.42□□□□□ -1.54
NUP54-206ENST00000508465 KREMEN2Q8NCW0 462 aa5.42□□□□□ -1.54
NUP54-206ENST00000508465 ACER1Q8TDN7 264 aa5.42□□□□□ -1.54
NUP54-206ENST00000508465 EDAQ92838 391 aa5.42□□□□□ -1.54
NUP54-206ENST00000508465 OSBP2Q969R2 916 aa5.42□□□□□ -1.54
NUP54-206ENST00000508465 STRBPQ96SI9 672 aaKnown RBP5.42□□□□□ -1.54
NUP54-206ENST00000508465 CEP89Q96ST8 783 aa5.42□□□□□ -1.54
NUP54-206ENST00000508465 SEC62Q99442 399 aaKnown RBP5.42□□□□□ -1.54
NUP54-206ENST00000508465 LGR4Q9BXB1 951 aa5.42□□□□□ -1.54
NUP54-206ENST00000508465 DDX24Q9GZR7 859 aaKnown RBP eCLIP5.42□□□□□ -1.54
NUP54-206ENST00000508465 DHX36Q9H2U1 1008 aaKnown RBP5.42□□□□□ -1.54
NUP54-206ENST00000508465 RWDD1Q9H446 243 aaPredicted RBP5.42□□□□□ -1.54
NUP54-206ENST00000508465 ASH2LQ9UBL3 628 aa5.42□□□□□ -1.54
NUP54-206ENST00000508465 HERC5Q9UII4 1024 aaKnown RBP5.42□□□□□ -1.54
NUP54-206ENST00000508465 FBXL7Q9UJT9 491 aa5.42□□□□□ -1.54
NUP54-206ENST00000508465 SLC4A4Q9Y6R1 1079 aa5.42□□□□□ -1.54
NUP54-206ENST00000508465 TNRC18O15417 2968 aaPredicted RBP5.42□□□□□ -1.54
NUP54-206ENST00000508465 MKI67P46013 3256 aaKnown RBP5.42□□□□□ -1.54
NUP54-206ENST00000508465 MPHOSPH10O00566 681 aaKnown RBP5.41□□□□□ -1.54
NUP54-206ENST00000508465 SCAMP3O14828 347 aaKnown RBP5.41□□□□□ -1.54
NUP54-206ENST00000508465 TLR2O60603 784 aa5.41□□□□□ -1.54
NUP54-206ENST00000508465 IGSF3O75054 1194 aa5.41□□□□□ -1.54
NUP54-206ENST00000508465 APPP05067 770 aa5.41□□□□□ -1.54
NUP54-206ENST00000508465 MX1P20591 662 aa5.41□□□□□ -1.54
NUP54-206ENST00000508465 GUCY1A2P33402 732 aa5.41□□□□□ -1.54
NUP54-206ENST00000508465 SHMT1P34896 483 aa5.41□□□□□ -1.54
NUP54-206ENST00000508465 PSMC4P43686 418 aa5.41□□□□□ -1.54
NUP54-206ENST00000508465 PDE1AP54750 535 aa5.41□□□□□ -1.54
NUP54-206ENST00000508465 SOX10P56693 466 aa5.41□□□□□ -1.54
NUP54-206ENST00000508465 DPTQ07507 201 aa5.41□□□□□ -1.54
NUP54-206ENST00000508465 SEPT2Q15019 361 aa5.41□□□□□ -1.54
NUP54-206ENST00000508465 UBE3CQ15386 1083 aa5.41□□□□□ -1.54
NUP54-206ENST00000508465 ABCB5Q2M3G0 1257 aa5.41□□□□□ -1.54
NUP54-206ENST00000508465 ZSCAN25Q6NSZ9 544 aa5.41□□□□□ -1.54
NUP54-206ENST00000508465 CTR9Q6PD62 1173 aa5.41□□□□□ -1.54
NUP54-206ENST00000508465 C17orf99Q6UX52 265 aa5.41□□□□□ -1.54
NUP54-206ENST00000508465 CCDC129Q6ZRS4 1044 aa5.41□□□□□ -1.54
NUP54-206ENST00000508465 REXO1L1PQ8IX06 675 aa5.41□□□□□ -1.54
NUP54-206ENST00000508465 DTX3Q8N9I9 347 aa5.41□□□□□ -1.54
NUP54-206ENST00000508465 KBTBD3Q8NAB2 608 aa5.41□□□□□ -1.54
NUP54-206ENST00000508465 GCC1Q96CN9 775 aa5.41□□□□□ -1.54
NUP54-206ENST00000508465 ERO1AQ96HE7 468 aa5.41□□□□□ -1.54
NUP54-206ENST00000508465 SEC16BQ96JE7 1060 aa5.41□□□□□ -1.54
NUP54-206ENST00000508465 INCENPQ9NQS7 918 aa5.41□□□□□ -1.54
NUP54-206ENST00000508465 STAP2Q9UGK3 403 aa5.41□□□□□ -1.54
NUP54-206ENST00000508465 SERPINB13Q9UIV8 391 aa5.41□□□□□ -1.54
NUP54-206ENST00000508465 ZBTB21Q9ULJ3 1066 aa5.41□□□□□ -1.54
NUP54-206ENST00000508465 STRIP2Q9ULQ0 834 aa5.41□□□□□ -1.54
NUP54-206ENST00000508465 NUB1Q9Y5A7 615 aa5.41□□□□□ -1.54
NUP54-206ENST00000508465 OTOFQ9HC10 1997 aa5.41□□□□□ -1.54
NUP54-206ENST00000508465 GSG1L2A8MUP6 293 aa5.4□□□□□ -1.54
NUP54-206ENST00000508465 ERC2O15083 957 aa5.4□□□□□ -1.54
NUP54-206ENST00000508465 GLRX3O76003 335 aaKnown RBP5.4□□□□□ -1.54
NUP54-206ENST00000508465 KNG1P01042 644 aa5.4□□□□□ -1.54
NUP54-206ENST00000508465 CKMP06732 381 aa5.4□□□□□ -1.54
NUP54-206ENST00000508465 ITGAVP06756 1048 aa5.4□□□□□ -1.54
NUP54-206ENST00000508465 ASNSP08243 561 aa5.4□□□□□ -1.54
NUP54-206ENST00000508465 ENO2P09104 434 aaPredicted RBP5.4□□□□□ -1.54
NUP54-206ENST00000508465 LCP1P13796 627 aa5.4□□□□□ -1.54
NUP54-206ENST00000508465 BACE1P56817 501 aa5.4□□□□□ -1.54
NUP54-206ENST00000508465 LACTBP83111 547 aaPredicted RBP5.4□□□□□ -1.54
NUP54-206ENST00000508465 NUCB1Q02818 461 aa5.4□□□□□ -1.54
NUP54-206ENST00000508465 PTH1RQ03431 593 aa5.4□□□□□ -1.54
NUP54-206ENST00000508465 GABPAQ06546 454 aa5.4□□□□□ -1.54
NUP54-206ENST00000508465 LSM12Q3MHD2 195 aaKnown RBP5.4□□□□□ -1.54
NUP54-206ENST00000508465 KIAA1755Q5JYT7 1200 aa5.4□□□□□ -1.54
NUP54-206ENST00000508465 C12orf60Q5U649 245 aa5.4□□□□□ -1.54
NUP54-206ENST00000508465 TATDN1Q6P1N9 297 aa5.4□□□□□ -1.54
NUP54-206ENST00000508465 FBXO46Q6PJ61 603 aaPredicted RBP5.4□□□□□ -1.54
NUP54-206ENST00000508465 CHD1LQ86WJ1 897 aa5.4□□□□□ -1.54
NUP54-206ENST00000508465 SMC5Q8IY18 1101 aa5.4□□□□□ -1.54
NUP54-206ENST00000508465 ANKRD13CQ8N6S4 541 aa5.4□□□□□ -1.54
NUP54-206ENST00000508465 AMER2Q8N7J2 671 aa5.4□□□□□ -1.54
NUP54-206ENST00000508465 RILPL2Q969X0 211 aa5.4□□□□□ -1.54
NUP54-206ENST00000508465 CHMP4CQ96CF2 233 aa5.4□□□□□ -1.54
NUP54-206ENST00000508465 P2RX7Q99572 595 aaKnown RBP5.4□□□□□ -1.54
NUP54-206ENST00000508465 FSD1Q9BTV5 496 aa5.4□□□□□ -1.54
NUP54-206ENST00000508465 SLC6A20Q9NP91 592 aa5.4□□□□□ -1.54
NUP54-206ENST00000508465 ATP8A2Q9NTI2 1148 aa5.4□□□□□ -1.54
NUP54-206ENST00000508465 ARHGAP20Q9P2F6 1191 aa5.4□□□□□ -1.54
NUP54-206ENST00000508465 RBPJLQ9UBG7 517 aa5.4□□□□□ -1.54
NUP54-206ENST00000508465 PTPN22Q9Y2R2 807 aa5.4□□□□□ -1.54
NUP54-206ENST00000508465 TTC41PQ6P2S7 1318 aa5.4□□□□□ -1.55
NUP54-206ENST00000508465 A0A1W2PRG0 241 aa5.39□□□□□ -1.55
NUP54-206ENST00000508465 GPAA1O43292 621 aa5.39□□□□□ -1.55
NUP54-206ENST00000508465 PRDM1O75626 825 aa5.39□□□□□ -1.55
NUP54-206ENST00000508465 AKR1B1P15121 316 aa5.39□□□□□ -1.55
NUP54-206ENST00000508465 CSF2RBP32927 897 aa5.39□□□□□ -1.55
NUP54-206ENST00000508465 GJA8P48165 433 aa5.39□□□□□ -1.55
NUP54-206ENST00000508465 RAC3P60763 192 aa5.39□□□□□ -1.55
NUP54-206ENST00000508465 GRIN1Q05586 938 aa5.39□□□□□ -1.55
NUP54-206ENST00000508465 KIF22Q14807 665 aa5.39□□□□□ -1.55
NUP54-206ENST00000508465 PKN2Q16513 984 aaKnown RBP5.39□□□□□ -1.55
NUP54-206ENST00000508465 SKIDA1Q1XH10 827 aa5.39□□□□□ -1.55
NUP54-206ENST00000508465 PHF19Q5T6S3 580 aa5.39□□□□□ -1.55
NUP54-206ENST00000508465 AGBL4Q5VU57 503 aa5.39□□□□□ -1.55
NUP54-206ENST00000508465 TMED8Q6PL24 325 aaPredicted RBP5.39□□□□□ -1.55
NUP54-206ENST00000508465 GPR155Q7Z3F1 870 aa5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms