RNA–Protein interactions for RNA: ENST00000507638.1

VEGFC-201, Transcript of vascular endothelial growth factor C, humanhuman

TSL 3

Gene VEGFC, Length 759 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFC-201ENST00000507638 SUCLG2Q96I99 432 aa6.39□□□□□ -1.39
VEGFC-201ENST00000507638 NOL10Q9BSC4 688 aaKnown RBP6.39□□□□□ -1.39
VEGFC-201ENST00000507638 TEX13BQ9BXU2 312 aa6.39□□□□□ -1.39
VEGFC-201ENST00000507638 CHMP4AQ9BY43 222 aa6.39□□□□□ -1.39
VEGFC-201ENST00000507638 LRRC3Q9BY71 257 aa6.39□□□□□ -1.39
VEGFC-201ENST00000507638 LRRC4CQ9HCJ2 640 aa6.39□□□□□ -1.39
VEGFC-201ENST00000507638 IGSF9Q9P2J2 1179 aa6.39□□□□□ -1.39
VEGFC-201ENST00000507638 KLK13Q9UKR3 277 aa6.39□□□□□ -1.39
VEGFC-201ENST00000507638 VAV3Q9UKW4 847 aa6.39□□□□□ -1.39
VEGFC-201ENST00000507638 PCDHB5Q9Y5E4 795 aa6.39□□□□□ -1.39
VEGFC-201ENST00000507638 MRPL42Q9Y6G3 142 aaKnown RBP6.39□□□□□ -1.39
VEGFC-201ENST00000507638 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP6.39□□□□□ -1.39
VEGFC-201ENST00000507638 PTPRCP08575 1304 aa6.39□□□□□ -1.39
VEGFC-201ENST00000507638 EMSYQ7Z589 1322 aa6.39□□□□□ -1.39
VEGFC-201ENST00000507638 C2CD3Q4AC94 2353 aa6.39□□□□□ -1.39
VEGFC-201ENST00000507638 KALRNO60229 2985 aa6.39□□□□□ -1.39
VEGFC-201ENST00000507638 UBR5O95071 2799 aaPredicted RBP6.38□□□□□ -1.39
VEGFC-201ENST00000507638 COL12A1Q99715 3063 aa6.38□□□□□ -1.39
VEGFC-201ENST00000507638 FAM221AA4D161 298 aa6.38□□□□□ -1.39
VEGFC-201ENST00000507638 GRM8O00222 908 aa6.38□□□□□ -1.39
VEGFC-201ENST00000507638 NEMFO60524 1076 aa6.38□□□□□ -1.39
VEGFC-201ENST00000507638 PGRP06401 933 aa6.38□□□□□ -1.39
VEGFC-201ENST00000507638 ETV3P41162 512 aa6.38□□□□□ -1.39
VEGFC-201ENST00000507638 RASGRF1Q13972 1273 aa6.38□□□□□ -1.39
VEGFC-201ENST00000507638 SIM2Q14190 667 aaPredicted RBP6.38□□□□□ -1.39
VEGFC-201ENST00000507638 TMEM201Q5SNT2 666 aa6.38□□□□□ -1.39
VEGFC-201ENST00000507638 RARS2Q5T160 578 aaKnown RBP6.38□□□□□ -1.39
VEGFC-201ENST00000507638 DCLRE1AQ6PJP8 1040 aa6.38□□□□□ -1.39
VEGFC-201ENST00000507638 MCATQ8IVS2 390 aaKnown RBP6.38□□□□□ -1.39
VEGFC-201ENST00000507638 SLC44A3Q8N4M1 653 aa6.38□□□□□ -1.39
VEGFC-201ENST00000507638 TOP6BLQ8N6T0 577 aa6.38□□□□□ -1.39
VEGFC-201ENST00000507638 C12orf76Q8N812 135 aaPredicted RBP6.38□□□□□ -1.39
VEGFC-201ENST00000507638 TSPYL6Q8N831 410 aa6.38□□□□□ -1.39
VEGFC-201ENST00000507638 RASGRP4Q8TDF6 673 aa6.38□□□□□ -1.39
VEGFC-201ENST00000507638 KAZALD1Q96I82 304 aa6.38□□□□□ -1.39
VEGFC-201ENST00000507638 STK31Q9BXU1 1019 aa6.38□□□□□ -1.39
VEGFC-201ENST00000507638 WDR11Q9BZH6 1224 aa6.38□□□□□ -1.39
VEGFC-201ENST00000507638 RC3H2Q9HBD1 1191 aaKnown RBP6.38□□□□□ -1.39
VEGFC-201ENST00000507638 ARHGEF3Q9NR81 526 aa6.38□□□□□ -1.39
VEGFC-201ENST00000507638 C9orf78Q9NZ63 289 aaPredicted RBP6.38□□□□□ -1.39
VEGFC-201ENST00000507638 RAI14Q9P0K7 980 aa6.38□□□□□ -1.39
VEGFC-201ENST00000507638 SERPINB13Q9UIV8 391 aa6.38□□□□□ -1.39
VEGFC-201ENST00000507638 GGT7Q9UJ14 662 aa6.38□□□□□ -1.39
VEGFC-201ENST00000507638 SLC5A6Q9Y289 635 aa6.38□□□□□ -1.39
VEGFC-201ENST00000507638 TLR6Q9Y2C9 796 aa6.38□□□□□ -1.39
VEGFC-201ENST00000507638 KIAA1217Q5T5P2 1943 aa6.38□□□□□ -1.39
VEGFC-201ENST00000507638 ACACAQ13085 2346 aa6.37□□□□□ -1.39
VEGFC-201ENST00000507638 DOPEY2Q9Y3R5 2298 aa6.37□□□□□ -1.39
VEGFC-201ENST00000507638 KIF2AO00139 706 aaPredicted RBP6.37□□□□□ -1.39
VEGFC-201ENST00000507638 MED26O95402 600 aa6.37□□□□□ -1.39
VEGFC-201ENST00000507638 BAG3O95817 575 aa6.37□□□□□ -1.39
VEGFC-201ENST00000507638 PF4P02776 101 aa6.37□□□□□ -1.39
VEGFC-201ENST00000507638 CEACAM5P06731 702 aa6.37□□□□□ -1.39
VEGFC-201ENST00000507638 CDK11BP21127 795 aaKnown RBP6.37□□□□□ -1.39
VEGFC-201ENST00000507638 ZNF76P36508 570 aa6.37□□□□□ -1.39
VEGFC-201ENST00000507638 KIR3DL1P43629 444 aa6.37□□□□□ -1.39
VEGFC-201ENST00000507638 CLCN7P51798 805 aa6.37□□□□□ -1.39
VEGFC-201ENST00000507638 NEK4P51957 841 aa6.37□□□□□ -1.39
VEGFC-201ENST00000507638 GP2P55259 537 aaKnown RBP6.37□□□□□ -1.39
VEGFC-201ENST00000507638 STARD6P59095 220 aa6.37□□□□□ -1.39
VEGFC-201ENST00000507638 PRKCQQ04759 706 aa6.37□□□□□ -1.39
VEGFC-201ENST00000507638 SLBPQ14493 270 aaKnown RBP eCLIP6.37□□□□□ -1.39
VEGFC-201ENST00000507638 COLEC12Q5KU26 742 aa6.37□□□□□ -1.39
VEGFC-201ENST00000507638 BEND3Q5T5X7 828 aa6.37□□□□□ -1.39
VEGFC-201ENST00000507638 OTOP3Q7RTS5 596 aa6.37□□□□□ -1.39
VEGFC-201ENST00000507638 ARHGAP30Q7Z6I6 1101 aaPredicted RBP6.37□□□□□ -1.39
VEGFC-201ENST00000507638 SESTD1Q86VW0 696 aa6.37□□□□□ -1.39
VEGFC-201ENST00000507638 SIAH1Q8IUQ4 282 aa6.37□□□□□ -1.39
VEGFC-201ENST00000507638 CASP10Q92851 521 aa6.37□□□□□ -1.39
VEGFC-201ENST00000507638 TMX3Q96JJ7 454 aa6.37□□□□□ -1.39
VEGFC-201ENST00000507638 FAM126AQ9BYI3 521 aaPredicted RBP6.37□□□□□ -1.39
VEGFC-201ENST00000507638 VCPKMTQ9H867 229 aa6.37□□□□□ -1.39
VEGFC-201ENST00000507638 HDAC6Q9UBN7 1215 aa6.37□□□□□ -1.39
VEGFC-201ENST00000507638 ZC3H7BQ9UGR2 993 aaKnown RBP6.37□□□□□ -1.39
VEGFC-201ENST00000507638 TMX2Q9Y320 296 aa6.37□□□□□ -1.39
VEGFC-201ENST00000507638 MTF2Q9Y483 593 aaPredicted RBP6.37□□□□□ -1.39
VEGFC-201ENST00000507638 CFAP46Q8IYW2 2715 aa6.37□□□□□ -1.39
VEGFC-201ENST00000507638 PCNX2A6NKB5 2137 aa6.37□□□□□ -1.39
VEGFC-201ENST00000507638 TTC3P53804 2025 aa6.37□□□□□ -1.39
VEGFC-201ENST00000507638 FRMPD2Q68DX3 1309 aaPredicted RBP6.36□□□□□ -1.39
VEGFC-201ENST00000507638 KANSL1LA0AUZ9 987 aa6.36□□□□□ -1.39
VEGFC-201ENST00000507638 SMTNL1A8MU46 457 aa6.36□□□□□ -1.39
VEGFC-201ENST00000507638 SCAMP3O14828 347 aaKnown RBP6.36□□□□□ -1.39
VEGFC-201ENST00000507638 CTIFO43310 598 aaKnown RBP6.36□□□□□ -1.39
VEGFC-201ENST00000507638 DGKIO75912 1065 aa6.36□□□□□ -1.39
VEGFC-201ENST00000507638 ADCY5O95622 1261 aa6.36□□□□□ -1.39
VEGFC-201ENST00000507638 ZNF806P0C7X5 589 aa6.36□□□□□ -1.39
VEGFC-201ENST00000507638 ZNF853P0CG23 659 aa6.36□□□□□ -1.39
VEGFC-201ENST00000507638 CCDC192P0DO97 292 aa6.36□□□□□ -1.39
VEGFC-201ENST00000507638 SRFP11831 508 aa6.36□□□□□ -1.39
VEGFC-201ENST00000507638 SDSP20132 328 aa6.36□□□□□ -1.39
VEGFC-201ENST00000507638 SHMT1P34896 483 aa6.36□□□□□ -1.39
VEGFC-201ENST00000507638 EIF4A3P38919 411 aaKnown RBP6.36□□□□□ -1.39
VEGFC-201ENST00000507638 THPOP40225 353 aa6.36□□□□□ -1.39
VEGFC-201ENST00000507638 APOBRQ0VD83 1088 aa6.36□□□□□ -1.39
VEGFC-201ENST00000507638 SCAPQ12770 1279 aa6.36□□□□□ -1.39
VEGFC-201ENST00000507638 NONOQ15233 471 aaKnown RBP eCLIP6.36□□□□□ -1.39
VEGFC-201ENST00000507638 PTPN14Q15678 1187 aa6.36□□□□□ -1.39
VEGFC-201ENST00000507638 ATP2B3Q16720 1220 aa6.36□□□□□ -1.39
VEGFC-201ENST00000507638 TWISTNBQ3B726 338 aaPredicted RBP6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms