RNA–Protein interactions for RNA: ENST00000506163.5

SMN1-204, Transcript of survival of motor neuron 1, telomeric, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMN1, Length 1,445 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN1-204ENST00000506163 EPCAMP16422 314 aa19.4■□□□□ 0.7
SMN1-204ENST00000506163 GARTP22102 1010 aa19.4■□□□□ 0.7
SMN1-204ENST00000506163 PPP2R3AQ06190 1150 aa19.4■□□□□ 0.7
SMN1-204ENST00000506163 AAK1Q2M2I8 961 aa19.4■□□□□ 0.7
SMN1-204ENST00000506163 USP41Q3LFD5 358 aa19.4■□□□□ 0.7
SMN1-204ENST00000506163 SYCE2Q6PIF2 218 aa19.4■□□□□ 0.7
SMN1-204ENST00000506163 PRSS55Q6UWB4 352 aaPredicted RBP19.4■□□□□ 0.7
SMN1-204ENST00000506163 NELFCDQ8IXH7 590 aa19.4■□□□□ 0.7
SMN1-204ENST00000506163 DDX27Q96GQ7 796 aaKnown RBP19.4■□□□□ 0.7
SMN1-204ENST00000506163 UROC1Q96N76 676 aa19.4■□□□□ 0.7
SMN1-204ENST00000506163 NECAB3Q96P71 396 aaPredicted RBP19.4■□□□□ 0.7
SMN1-204ENST00000506163 FAM213AQ9BRX8 229 aa19.4■□□□□ 0.7
SMN1-204ENST00000506163 RXFP1Q9HBX9 757 aa19.4■□□□□ 0.7
SMN1-204ENST00000506163 CHMP5Q9NZZ3 219 aa19.4■□□□□ 0.7
SMN1-204ENST00000506163 SF3B1O75533 1304 aaKnown RBP eCLIP19.4■□□□□ 0.7
SMN1-204ENST00000506163 GRXCR2A6NFK2 248 aa19.39■□□□□ 0.69
SMN1-204ENST00000506163 PPEF2O14830 753 aa19.39■□□□□ 0.69
SMN1-204ENST00000506163 URODP06132 367 aa19.39■□□□□ 0.69
SMN1-204ENST00000506163 IL9P15248 144 aa19.39■□□□□ 0.69
SMN1-204ENST00000506163 RPL17P18621 184 aaKnown RBP19.39■□□□□ 0.69
SMN1-204ENST00000506163 BMS1Q14692 1282 aaKnown RBP19.39■□□□□ 0.69
SMN1-204ENST00000506163 BMT2Q1RMZ1 405 aa19.39■□□□□ 0.69
SMN1-204ENST00000506163 SCARA3Q6AZY7 606 aa19.39■□□□□ 0.69
SMN1-204ENST00000506163 PTCRAQ6ISU1 281 aaPredicted RBP19.39■□□□□ 0.69
SMN1-204ENST00000506163 KANK3Q6NY19 840 aa19.39■□□□□ 0.69
SMN1-204ENST00000506163 RIN2Q8WYP3 895 aaPredicted RBP19.39■□□□□ 0.69
SMN1-204ENST00000506163 FAM84AQ96KN4 292 aa19.39■□□□□ 0.69
SMN1-204ENST00000506163 S1PR5Q9H228 398 aa19.39■□□□□ 0.69
SMN1-204ENST00000506163 CD207Q9UJ71 328 aa19.39■□□□□ 0.69
SMN1-204ENST00000506163 NCOR1O75376 2440 aa19.39■□□□□ 0.69
SMN1-204ENST00000506163 RPN1P04843 607 aaKnown RBP19.38■□□□□ 0.69
SMN1-204ENST00000506163 MYL1P05976 194 aa19.38■□□□□ 0.69
SMN1-204ENST00000506163 LRPAP1P30533 357 aa19.38■□□□□ 0.69
SMN1-204ENST00000506163 RPL9P32969 192 aaKnown RBP19.38■□□□□ 0.69
SMN1-204ENST00000506163 SPATA1Q5VX52 437 aa19.38■□□□□ 0.69
SMN1-204ENST00000506163 KIAA1841Q6NSI8 718 aa19.38■□□□□ 0.69
SMN1-204ENST00000506163 ANKRD54Q6NXT1 300 aa19.38■□□□□ 0.69
SMN1-204ENST00000506163 STXBP4Q6ZWJ1 553 aa19.38■□□□□ 0.69
SMN1-204ENST00000506163 CEP57Q86XR8 500 aa19.38■□□□□ 0.69
SMN1-204ENST00000506163 EFCAB13Q8IY85 973 aa19.38■□□□□ 0.69
SMN1-204ENST00000506163 LNX1Q8TBB1 728 aaPredicted RBP19.38■□□□□ 0.69
SMN1-204ENST00000506163 ADAMTS19Q8TE59 1207 aa19.38■□□□□ 0.69
SMN1-204ENST00000506163 TTPALQ9BTX7 342 aa19.38■□□□□ 0.69
SMN1-204ENST00000506163 CUL9Q8IWT3 2517 aa19.37■□□□□ 0.69
SMN1-204ENST00000506163 MBTPS2O43462 519 aa19.37■□□□□ 0.69
SMN1-204ENST00000506163 CYP3A5P20815 502 aa19.37■□□□□ 0.69
SMN1-204ENST00000506163 FGFR3P22607 806 aa19.37■□□□□ 0.69
SMN1-204ENST00000506163 KLRC2P26717 231 aa19.37■□□□□ 0.69
SMN1-204ENST00000506163 TKTP29401 623 aaKnown RBP19.37■□□□□ 0.69
SMN1-204ENST00000506163 CLCN4P51793 760 aa19.37■□□□□ 0.69
SMN1-204ENST00000506163 ARMCX5Q6P1M9 558 aa19.37■□□□□ 0.69
SMN1-204ENST00000506163 CD302Q8IX05 232 aa19.37■□□□□ 0.69
SMN1-204ENST00000506163 SMRP1Q8NCR6 262 aa19.37■□□□□ 0.69
SMN1-204ENST00000506163 CLSTN3Q9BQT9 956 aa19.37■□□□□ 0.69
SMN1-204ENST00000506163 ASB7Q9H672 318 aa19.37■□□□□ 0.69
SMN1-204ENST00000506163 AGPAT3Q9NRZ7 376 aa19.37■□□□□ 0.69
SMN1-204ENST00000506163 EXOC1Q9NV70 894 aa19.37■□□□□ 0.69
SMN1-204ENST00000506163 CDH22Q9UJ99 828 aa19.37■□□□□ 0.69
SMN1-204ENST00000506163 UBQLN1Q9UMX0 589 aaKnown RBP19.37■□□□□ 0.69
SMN1-204ENST00000506163 MUC3AQ02505 3323 aa19.36■□□□□ 0.69
SMN1-204ENST00000506163 GOLGA6L4A6NEF3 574 aa19.36■□□□□ 0.69
SMN1-204ENST00000506163 CLIC2O15247 247 aa19.36■□□□□ 0.69
SMN1-204ENST00000506163 ADAM12O43184 909 aa19.36■□□□□ 0.69
SMN1-204ENST00000506163 EXTL3O43909 919 aa19.36■□□□□ 0.69
SMN1-204ENST00000506163 POU5F1Q01860 360 aaKnown RBP19.36■□□□□ 0.69
SMN1-204ENST00000506163 RSPO2Q6UXX9 243 aaPredicted RBP19.36■□□□□ 0.69
SMN1-204ENST00000506163 BRSK2Q8IWQ3 736 aa19.36■□□□□ 0.69
SMN1-204ENST00000506163 GPR65Q8IYL9 337 aa19.36■□□□□ 0.69
SMN1-204ENST00000506163 C12orf76Q8N812 135 aaPredicted RBP19.36■□□□□ 0.69
SMN1-204ENST00000506163 PIK3R5Q8WYR1 880 aa19.36■□□□□ 0.69
SMN1-204ENST00000506163 APOL5Q9BWW9 433 aa19.36■□□□□ 0.69
SMN1-204ENST00000506163 EMILIN2Q9BXX0 1053 aa19.36■□□□□ 0.69
SMN1-204ENST00000506163 HSPBP1Q9NZL4 362 aa19.36■□□□□ 0.69
SMN1-204ENST00000506163 UBE4BO95155 1302 aa19.35■□□□□ 0.69
SMN1-204ENST00000506163 RHOBTB3O94955 611 aa19.35■□□□□ 0.69
SMN1-204ENST00000506163 FAM160A1Q05DH4 1040 aa19.35■□□□□ 0.69
SMN1-204ENST00000506163 ELAVL2Q12926 359 aaKnown RBP19.35■□□□□ 0.69
SMN1-204ENST00000506163 PSMD2Q13200 908 aa19.35■□□□□ 0.69
SMN1-204ENST00000506163 PNOCQ13519 176 aa19.35■□□□□ 0.69
SMN1-204ENST00000506163 TMEM132DQ14C87 1099 aa19.35■□□□□ 0.69
SMN1-204ENST00000506163 KNOP1Q1ED39 458 aaKnown RBP19.35■□□□□ 0.69
SMN1-204ENST00000506163 PDZRN4Q6ZMN7 1036 aaPredicted RBP19.35■□□□□ 0.69
SMN1-204ENST00000506163 CBWD2Q8IUF1 395 aa19.35■□□□□ 0.69
SMN1-204ENST00000506163 GLYCTKQ8IVS8 523 aa19.35■□□□□ 0.69
SMN1-204ENST00000506163 ERCC4Q92889 916 aaPredicted RBP19.35■□□□□ 0.69
SMN1-204ENST00000506163 FBXL18Q96ME1 805 aa19.35■□□□□ 0.69
SMN1-204ENST00000506163 TSPAN18Q96SJ8 248 aa19.35■□□□□ 0.69
SMN1-204ENST00000506163 FNIP2Q9P278 1114 aa19.35■□□□□ 0.69
SMN1-204ENST00000506163 SSX2IPQ9Y2D8 614 aa19.35■□□□□ 0.69
SMN1-204ENST00000506163 DERAQ9Y315 318 aa19.35■□□□□ 0.69
SMN1-204ENST00000506163 PLXNA3P51805 1871 aa19.35■□□□□ 0.69
SMN1-204ENST00000506163 SCN1AP35498 2009 aa19.35■□□□□ 0.69
SMN1-204ENST00000506163 ANO9A1A5B4 782 aa19.34■□□□□ 0.69
SMN1-204ENST00000506163 FSD2A1L4K1 749 aa19.34■□□□□ 0.69
SMN1-204ENST00000506163 SPTLC1O15269 473 aa19.34■□□□□ 0.69
SMN1-204ENST00000506163 SPATA31D3P0C874 917 aa19.34■□□□□ 0.69
SMN1-204ENST00000506163 SMAD4Q13485 552 aaKnown RBP19.34■□□□□ 0.69
SMN1-204ENST00000506163 SMAD2Q15796 467 aaKnown RBP19.34■□□□□ 0.69
SMN1-204ENST00000506163 LILRA6Q6PI73 481 aa19.34■□□□□ 0.69
SMN1-204ENST00000506163 SPATA31D4Q6ZUB0 917 aa19.34■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms