RNA–Protein interactions for RNA: ENST00000505746.1

PDLIM7-214, Transcript of PDZ and LIM domain 7, humanhuman

TSL 5

Gene PDLIM7, Length 405 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-214ENST00000505746 KMT2EQ8IZD2 1858 aa13.17□□□□□ -0.3
PDLIM7-214ENST00000505746 CD2BP2O95400 341 aaKnown RBP13.17□□□□□ -0.3
PDLIM7-214ENST00000505746 NBL1P41271 181 aa13.17□□□□□ -0.3
PDLIM7-214ENST00000505746 MCL1Q07820 350 aa13.17□□□□□ -0.3
PDLIM7-214ENST00000505746 KYAT1Q16773 422 aa13.17□□□□□ -0.3
PDLIM7-214ENST00000505746 SLC10A6Q3KNW5 377 aa13.17□□□□□ -0.3
PDLIM7-214ENST00000505746 PABPC1LQ4VXU2 614 aaKnown RBP13.17□□□□□ -0.3
PDLIM7-214ENST00000505746 VARS2Q5ST30 1063 aaKnown RBP13.17□□□□□ -0.3
PDLIM7-214ENST00000505746 PHLDB3Q6NSJ2 640 aa13.17□□□□□ -0.3
PDLIM7-214ENST00000505746 PARM1Q6UWI2 310 aa13.17□□□□□ -0.3
PDLIM7-214ENST00000505746 BRAPQ7Z569 592 aa13.17□□□□□ -0.3
PDLIM7-214ENST00000505746 DTWD2Q8NBA8 298 aa13.17□□□□□ -0.3
PDLIM7-214ENST00000505746 C18orf25Q96B23 403 aaPredicted RBP13.17□□□□□ -0.3
PDLIM7-214ENST00000505746 BICD1Q96G01 975 aa13.17□□□□□ -0.3
PDLIM7-214ENST00000505746 SHDQ96IW2 340 aa13.17□□□□□ -0.3
PDLIM7-214ENST00000505746 PLEKHA5Q9HAU0 1116 aa13.17□□□□□ -0.3
PDLIM7-214ENST00000505746 ARHGEF3Q9NR81 526 aa13.17□□□□□ -0.3
PDLIM7-214ENST00000505746 DNMT3BQ9UBC3 853 aaKnown RBP13.17□□□□□ -0.3
PDLIM7-214ENST00000505746 PIEZO1Q92508 2521 aa13.17□□□□□ -0.3
PDLIM7-214ENST00000505746 NPHP3-ACAD11A0A0J9YXS1 232 aa13.16□□□□□ -0.3
PDLIM7-214ENST00000505746 PRRG1O14668 218 aa13.16□□□□□ -0.3
PDLIM7-214ENST00000505746 ABLIM3O94929 683 aa13.16□□□□□ -0.3
PDLIM7-214ENST00000505746 LRG1P02750 347 aa13.16□□□□□ -0.3
PDLIM7-214ENST00000505746 CLTAP09496 248 aa13.16□□□□□ -0.3
PDLIM7-214ENST00000505746 ATF2P15336 505 aa13.16□□□□□ -0.3
PDLIM7-214ENST00000505746 PTPN2P17706 415 aa13.16□□□□□ -0.3
PDLIM7-214ENST00000505746 MARCKSP29966 332 aaPredicted RBP13.16□□□□□ -0.3
PDLIM7-214ENST00000505746 MCM4P33991 863 aa13.16□□□□□ -0.3
PDLIM7-214ENST00000505746 LONP1P36776 959 aaKnown RBP13.16□□□□□ -0.3
PDLIM7-214ENST00000505746 NCKAP1LP55160 1127 aa13.16□□□□□ -0.3
PDLIM7-214ENST00000505746 ARPP19P56211 112 aa13.16□□□□□ -0.3
PDLIM7-214ENST00000505746 ROR1Q01973 937 aa13.16□□□□□ -0.3
PDLIM7-214ENST00000505746 MRPL58Q14197 206 aaKnown RBP13.16□□□□□ -0.3
PDLIM7-214ENST00000505746 ANGPT1Q15389 498 aa13.16□□□□□ -0.3
PDLIM7-214ENST00000505746 SEZ6Q53EL9 994 aa13.16□□□□□ -0.3
PDLIM7-214ENST00000505746 ARSHQ5FYA8 562 aa13.16□□□□□ -0.3
PDLIM7-214ENST00000505746 HAUS6Q7Z4H7 955 aa13.16□□□□□ -0.3
PDLIM7-214ENST00000505746 APPL2Q8NEU8 664 aa13.16□□□□□ -0.3
PDLIM7-214ENST00000505746 RASSF8Q8NHQ8 419 aa13.16□□□□□ -0.3
PDLIM7-214ENST00000505746 ITFG1Q8TB96 612 aa13.16□□□□□ -0.3
PDLIM7-214ENST00000505746 FGF14Q92915 247 aa13.16□□□□□ -0.3
PDLIM7-214ENST00000505746 KCNN1Q92952 543 aa13.16□□□□□ -0.3
PDLIM7-214ENST00000505746 SUSD3Q96L08 255 aa13.16□□□□□ -0.3
PDLIM7-214ENST00000505746 TBC1D17Q9HA65 648 aa13.16□□□□□ -0.3
PDLIM7-214ENST00000505746 AVENQ9NQS1 362 aaPredicted RBP13.16□□□□□ -0.3
PDLIM7-214ENST00000505746 HCFC1R1Q9NWW0 138 aa13.16□□□□□ -0.3
PDLIM7-214ENST00000505746 MRPS23Q9Y3D9 190 aaKnown RBP13.16□□□□□ -0.3
PDLIM7-214ENST00000505746 PLXNA3P51805 1871 aa13.16□□□□□ -0.3
PDLIM7-214ENST00000505746 ARHGEF37A1IGU5 675 aa13.15□□□□□ -0.3
PDLIM7-214ENST00000505746 TBC1D4O60343 1298 aa13.15□□□□□ -0.3
PDLIM7-214ENST00000505746 KRT18P05783 430 aaKnown RBP13.15□□□□□ -0.3
PDLIM7-214ENST00000505746 RHOP08100 348 aa13.15□□□□□ -0.3
PDLIM7-214ENST00000505746 ABCD1P33897 745 aa13.15□□□□□ -0.3
PDLIM7-214ENST00000505746 LIG4P49917 911 aa13.15□□□□□ -0.3
PDLIM7-214ENST00000505746 GPC5P78333 572 aa13.15□□□□□ -0.3
PDLIM7-214ENST00000505746 PFKPQ01813 784 aa13.15□□□□□ -0.3
PDLIM7-214ENST00000505746 CACNB1Q02641 598 aaPredicted RBP13.15□□□□□ -0.3
PDLIM7-214ENST00000505746 CTXN3Q4LDR2 81 aa13.15□□□□□ -0.3
PDLIM7-214ENST00000505746 TPGS2Q68CL5 300 aa13.15□□□□□ -0.3
PDLIM7-214ENST00000505746 ZNF280DQ6N043 979 aa13.15□□□□□ -0.3
PDLIM7-214ENST00000505746 GPBP1Q86WP2 473 aa13.15□□□□□ -0.3
PDLIM7-214ENST00000505746 NPAS3Q8IXF0 933 aa13.15□□□□□ -0.3
PDLIM7-214ENST00000505746 TCEAL8Q8IYN2 117 aa13.15□□□□□ -0.3
PDLIM7-214ENST00000505746 MYCT1Q8N699 235 aa13.15□□□□□ -0.3
PDLIM7-214ENST00000505746 ST13P5Q8NFI4 369 aaPredicted RBP13.15□□□□□ -0.3
PDLIM7-214ENST00000505746 TBC1D32Q96NH3 1257 aa13.15□□□□□ -0.3
PDLIM7-214ENST00000505746 RPP25Q9BUL9 199 aaKnown RBP13.15□□□□□ -0.3
PDLIM7-214ENST00000505746 PARVGQ9HBI0 331 aa13.15□□□□□ -0.3
PDLIM7-214ENST00000505746 CYP4F11Q9HBI6 524 aa13.15□□□□□ -0.3
PDLIM7-214ENST00000505746 GDE1Q9NZC3 331 aa13.15□□□□□ -0.3
PDLIM7-214ENST00000505746 FBXL5Q9UKA1 691 aa13.15□□□□□ -0.3
PDLIM7-214ENST00000505746 MAFFQ9ULX9 164 aa13.15□□□□□ -0.3
PDLIM7-214ENST00000505746 TBX20Q9UMR3 447 aa13.15□□□□□ -0.3
PDLIM7-214ENST00000505746 SIT1Q9Y3P8 196 aa13.15□□□□□ -0.3
PDLIM7-214ENST00000505746 ZDBF2Q9HCK1 2354 aa13.15□□□□□ -0.3
PDLIM7-214ENST00000505746 TTC26A0AVF1 554 aa13.14□□□□□ -0.31
PDLIM7-214ENST00000505746 WDR27A2RRH5 827 aa13.14□□□□□ -0.31
PDLIM7-214ENST00000505746 MEFVO15553 781 aaPredicted RBP13.14□□□□□ -0.31
PDLIM7-214ENST00000505746 XPOTO43592 962 aaKnown RBP13.14□□□□□ -0.31
PDLIM7-214ENST00000505746 FAM13AO94988 1023 aa13.14□□□□□ -0.31
PDLIM7-214ENST00000505746 CXCL8P10145 99 aa13.14□□□□□ -0.31
PDLIM7-214ENST00000505746 CYP3A5P20815 502 aa13.14□□□□□ -0.31
PDLIM7-214ENST00000505746 STARD6P59095 220 aa13.14□□□□□ -0.31
PDLIM7-214ENST00000505746 PPP2R3AQ06190 1150 aa13.14□□□□□ -0.31
PDLIM7-214ENST00000505746 DHX8Q14562 1220 aaKnown RBP13.14□□□□□ -0.31
PDLIM7-214ENST00000505746 ELMOD1Q8N336 334 aa13.14□□□□□ -0.31
PDLIM7-214ENST00000505746 DDX12PQ92771 950 aa13.14□□□□□ -0.31
PDLIM7-214ENST00000505746 NKD2Q969F2 451 aaPredicted RBP13.14□□□□□ -0.31
PDLIM7-214ENST00000505746 TSPAN18Q96SJ8 248 aa13.14□□□□□ -0.31
PDLIM7-214ENST00000505746 REEP2Q9BRK0 252 aa13.14□□□□□ -0.31
PDLIM7-214ENST00000505746 OXCT2Q9BYC2 517 aaPredicted RBP13.14□□□□□ -0.31
PDLIM7-214ENST00000505746 TUBGCP4Q9UGJ1 667 aa13.14□□□□□ -0.31
PDLIM7-214ENST00000505746 UBQLN1Q9UMX0 589 aaKnown RBP13.14□□□□□ -0.31
PDLIM7-214ENST00000505746 PCDHB8Q9UN66 801 aa13.14□□□□□ -0.31
PDLIM7-214ENST00000505746 C2orf16Q68DN1 1984 aa13.14□□□□□ -0.31
PDLIM7-214ENST00000505746 PRR23AA6NEV1 266 aa13.13□□□□□ -0.31
PDLIM7-214ENST00000505746 K7ENM7 598 aa13.13□□□□□ -0.31
PDLIM7-214ENST00000505746 ZNF197O14709 1029 aa13.13□□□□□ -0.31
PDLIM7-214ENST00000505746 HNRNPDLO14979 420 aaKnown RBP13.13□□□□□ -0.31
PDLIM7-214ENST00000505746 OGTO15294 1046 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms