RNA–Protein interactions for RNA: ENST00000504807.5

DDX41-204, Transcript of DEAD-box helicase 41, humanhuman

TSL 2

Gene DDX41, Length 794 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-204ENST00000504807 FNIP2Q9P278 1114 aa14.42□□□□□ -0.1
DDX41-204ENST00000504807 STK39Q9UEW8 545 aa14.42□□□□□ -0.1
DDX41-204ENST00000504807 SMC3Q9UQE7 1217 aa14.42□□□□□ -0.1
DDX41-204ENST00000504807 TRIP11Q15643 1979 aa14.42□□□□□ -0.1
DDX41-204ENST00000504807 SF3B1O75533 1304 aaKnown RBP eCLIP14.41□□□□□ -0.14e-7■■■■■ 133.7
DDX41-204ENST00000504807 H3BQV1 296 aa14.41□□□□□ -0.1
DDX41-204ENST00000504807 PLA2G4BP0C869 781 aa14.41□□□□□ -0.1
DDX41-204ENST00000504807 MAPTP10636 758 aaKnown RBP14.41□□□□□ -0.1
DDX41-204ENST00000504807 TKTP29401 623 aaKnown RBP14.41□□□□□ -0.1
DDX41-204ENST00000504807 GRM5P41594 1212 aa14.41□□□□□ -0.1
DDX41-204ENST00000504807 CSTF1Q05048 431 aaKnown RBP14.41□□□□□ -0.1
DDX41-204ENST00000504807 UPP1Q16831 310 aa14.41□□□□□ -0.1
DDX41-204ENST00000504807 ZNF568Q3ZCX4 644 aa14.41□□□□□ -0.1
DDX41-204ENST00000504807 ZBTB41Q5SVQ8 909 aa14.41□□□□□ -0.1
DDX41-204ENST00000504807 LARP1BQ659C4 914 aaKnown RBP14.41□□□□□ -0.1
DDX41-204ENST00000504807 PHLDB3Q6NSJ2 640 aa14.41□□□□□ -0.1
DDX41-204ENST00000504807 POTEHQ6S545 545 aa14.41□□□□□ -0.1
DDX41-204ENST00000504807 CEP57Q86XR8 500 aa14.41□□□□□ -0.1
DDX41-204ENST00000504807 PIK3R5Q8WYR1 880 aa14.41□□□□□ -0.1
DDX41-204ENST00000504807 ADPGKQ9BRR6 497 aa14.41□□□□□ -0.1
DDX41-204ENST00000504807 NTPCRQ9BSD7 190 aaKnown RBP14.41□□□□□ -0.1
DDX41-204ENST00000504807 RAB34Q9BZG1 259 aa14.41□□□□□ -0.1
DDX41-204ENST00000504807 NT5C3AQ9H0P0 336 aa14.41□□□□□ -0.1
DDX41-204ENST00000504807 IKZF4Q9H2S9 585 aa14.41□□□□□ -0.1
DDX41-204ENST00000504807 ARHGEF3Q9NR81 526 aa14.41□□□□□ -0.1
DDX41-204ENST00000504807 SPATA6Q9NWH7 488 aaPredicted RBP14.41□□□□□ -0.1
DDX41-204ENST00000504807 CACNA1IQ9P0X4 2223 aa14.41□□□□□ -0.1
DDX41-204ENST00000504807 CLUHO75153 1309 aa14.41□□□□□ -0.1
DDX41-204ENST00000504807 NRG2O14511 850 aaPredicted RBP14.4□□□□□ -0.1
DDX41-204ENST00000504807 LAMTOR5O43504 91 aa14.4□□□□□ -0.1
DDX41-204ENST00000504807 SRFP11831 508 aa14.4□□□□□ -0.1
DDX41-204ENST00000504807 HARSP12081 509 aaKnown RBP14.4□□□□□ -0.1
DDX41-204ENST00000504807 PLS3P13797 630 aa14.4□□□□□ -0.1
DDX41-204ENST00000504807 FGFR3P22607 806 aa14.4□□□□□ -0.1
DDX41-204ENST00000504807 DMP1Q13316 513 aaPredicted RBP14.4□□□□□ -0.1
DDX41-204ENST00000504807 KARSQ15046 597 aaKnown RBP14.4□□□□□ -0.1
DDX41-204ENST00000504807 PSMD5Q16401 504 aa14.4□□□□□ -0.1
DDX41-204ENST00000504807 SLC44A3Q8N4M1 653 aa14.4□□□□□ -0.1
DDX41-204ENST00000504807 PJA1Q8NG27 643 aa14.4□□□□□ -0.1
DDX41-204ENST00000504807 SMG7Q92540 1137 aaKnown RBP14.4□□□□□ -0.1
DDX41-204ENST00000504807 DDX27Q96GQ7 796 aaKnown RBP14.4□□□□□ -0.1
DDX41-204ENST00000504807 DRC1Q96MC2 740 aa14.4□□□□□ -0.1
DDX41-204ENST00000504807 FIZ1Q96SL8 496 aa14.4□□□□□ -0.1
DDX41-204ENST00000504807 TTPALQ9BTX7 342 aa14.4□□□□□ -0.1
DDX41-204ENST00000504807 MRPL4Q9BYD3 311 aaKnown RBP14.4□□□□□ -0.1
DDX41-204ENST00000504807 WDR6Q9NNW5 1121 aaKnown RBP14.4□□□□□ -0.1
DDX41-204ENST00000504807 FBXW11Q9UKB1 542 aa14.4□□□□□ -0.1
DDX41-204ENST00000504807 PCDHGA2Q9Y5H1 932 aa14.4□□□□□ -0.1
DDX41-204ENST00000504807 CLIC4Q9Y696 253 aa14.4□□□□□ -0.1
DDX41-204ENST00000504807 DYNC1LI1Q9Y6G9 523 aaKnown RBP14.4□□□□□ -0.1
DDX41-204ENST00000504807 LOC105378220A0A1B0GUY1 285 aaPredicted RBP14.39□□□□□ -0.11
DDX41-204ENST00000504807 TMEM189-UBE2V1I3L0A0 370 aa14.39□□□□□ -0.11
DDX41-204ENST00000504807 SLC30A4O14863 429 aa14.39□□□□□ -0.11
DDX41-204ENST00000504807 NR1I2O75469 434 aa14.39□□□□□ -0.11
DDX41-204ENST00000504807 GBP2P32456 591 aaPredicted RBP14.39□□□□□ -0.11
DDX41-204ENST00000504807 SPAG1Q07617 926 aa14.39□□□□□ -0.11
DDX41-204ENST00000504807 RESTQ13127 1097 aa14.39□□□□□ -0.11
DDX41-204ENST00000504807 DHX8Q14562 1220 aaKnown RBP14.39□□□□□ -0.11
DDX41-204ENST00000504807 PTPAQ15257 358 aa14.39□□□□□ -0.11
DDX41-204ENST00000504807 SF3A1Q15459 793 aaKnown RBP14.39□□□□□ -0.11
DDX41-204ENST00000504807 SLC10A6Q3KNW5 377 aa14.39□□□□□ -0.11
DDX41-204ENST00000504807 ZNF528Q3MIS6 628 aa14.39□□□□□ -0.11
DDX41-204ENST00000504807 ARL6IP4Q66PJ3 421 aaKnown RBP14.39□□□□□ -0.11
DDX41-204ENST00000504807 MPZL3Q6UWV2 235 aa14.39□□□□□ -0.11
DDX41-204ENST00000504807 GPR65Q8IYL9 337 aa14.39□□□□□ -0.11
DDX41-204ENST00000504807 NETO1Q8TDF5 533 aa14.39□□□□□ -0.11
DDX41-204ENST00000504807 SPIRE2Q8WWL2 714 aa14.39□□□□□ -0.11
DDX41-204ENST00000504807 REEP2Q9BRK0 252 aa14.39□□□□□ -0.11
DDX41-204ENST00000504807 HCFC1R1Q9NWW0 138 aa14.39□□□□□ -0.11
DDX41-204ENST00000504807 TUBGCP4Q9UGJ1 667 aa14.39□□□□□ -0.11
DDX41-204ENST00000504807 GMEB2Q9UKD1 530 aa14.39□□□□□ -0.11
DDX41-204ENST00000504807 SSX2IPQ9Y2D8 614 aa14.39□□□□□ -0.11
DDX41-204ENST00000504807 STK24Q9Y6E0 443 aa14.39□□□□□ -0.11
DDX41-204ENST00000504807 FANCMQ8IYD8 2048 aa14.39□□□□□ -0.11
DDX41-204ENST00000504807 DOCK6Q96HP0 2047 aa14.39□□□□□ -0.11
DDX41-204ENST00000504807 MTCL1Q9Y4B5 1905 aaKnown RBP14.39□□□□□ -0.11
DDX41-204ENST00000504807 FLNBO75369 2602 aaKnown RBP14.38□□□□□ -0.11
DDX41-204ENST00000504807 TISP43B9A030 160 aa14.38□□□□□ -0.11
DDX41-204ENST00000504807 FAM189A1O60320 539 aa14.38□□□□□ -0.11
DDX41-204ENST00000504807 ZMYND10O75800 440 aa14.38□□□□□ -0.11
DDX41-204ENST00000504807 B3GAT3O94766 335 aa14.38□□□□□ -0.11
DDX41-204ENST00000504807 MCF2P10911 925 aa14.38□□□□□ -0.11
DDX41-204ENST00000504807 KCNE1P15382 129 aa14.38□□□□□ -0.11
DDX41-204ENST00000504807 PLCG1P19174 1290 aa14.38□□□□□ -0.11
DDX41-204ENST00000504807 TNFSF9P41273 254 aa14.38□□□□□ -0.11
DDX41-204ENST00000504807 MCM2P49736 904 aa14.38□□□□□ -0.11
DDX41-204ENST00000504807 NCKAP1LP55160 1127 aa14.38□□□□□ -0.11
DDX41-204ENST00000504807 SPEM2Q0P670 501 aa14.38□□□□□ -0.11
DDX41-204ENST00000504807 MCM6Q14566 821 aa14.38□□□□□ -0.11
DDX41-204ENST00000504807 SLC39A4Q6P5W5 647 aa14.38□□□□□ -0.11
DDX41-204ENST00000504807 DCLRE1AQ6PJP8 1040 aa14.38□□□□□ -0.11
DDX41-204ENST00000504807 EPSTI1Q96J88 318 aa14.38□□□□□ -0.11
DDX41-204ENST00000504807 RPP25Q9BUL9 199 aaKnown RBP14.38□□□□□ -0.11
DDX41-204ENST00000504807 RHOBTB2Q9BYZ6 727 aa14.38□□□□□ -0.11
DDX41-204ENST00000504807 PRKD2Q9BZL6 878 aa14.38□□□□□ -0.11
DDX41-204ENST00000504807 EPC1Q9H2F5 836 aa14.38□□□□□ -0.11
DDX41-204ENST00000504807 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP14.38□□□□□ -0.11
DDX41-204ENST00000504807 CNTN3Q9P232 1028 aa14.38□□□□□ -0.11
DDX41-204ENST00000504807 ANKFY1Q9P2R3 1169 aa14.38□□□□□ -0.11
DDX41-204ENST00000504807 MTRRQ9UBK8 725 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms