RNA–Protein interactions for RNA: ENST00000504788.5

LMNB1-208, Transcript of lamin B1, humanhuman

TSL 2

Gene LMNB1, Length 1,801 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-208ENST00000504788 KIAA1586Q9HCI6 787 aa5.37□□□□□ -1.55
LMNB1-208ENST00000504788 INTS13Q9NVM9 706 aa5.37□□□□□ -1.55
LMNB1-208ENST00000504788 FANCLQ9NW38 375 aa5.37□□□□□ -1.55
LMNB1-208ENST00000504788 RBAKQ9NYW8 714 aaPredicted RBP5.37□□□□□ -1.55
LMNB1-208ENST00000504788 TUBGCP4Q9UGJ1 667 aa5.37□□□□□ -1.55
LMNB1-208ENST00000504788 NFE2L3Q9Y4A8 694 aa5.37□□□□□ -1.55
LMNB1-208ENST00000504788 NME7Q9Y5B8 376 aa5.37□□□□□ -1.55
LMNB1-208ENST00000504788 SLC4A7Q9Y6M7 1214 aa5.37□□□□□ -1.55
LMNB1-208ENST00000504788 PLXNA3P51805 1871 aa5.36□□□□□ -1.55
LMNB1-208ENST00000504788 HSFX4A0A1B0GTS1 333 aaPredicted RBP5.36□□□□□ -1.55
LMNB1-208ENST00000504788 HSFX3A0A1B0GWH4 333 aaPredicted RBP5.36□□□□□ -1.55
LMNB1-208ENST00000504788 BICDL2A1A5D9 508 aa5.36□□□□□ -1.55
LMNB1-208ENST00000504788 EPOPA6NHQ4 379 aa5.36□□□□□ -1.55
LMNB1-208ENST00000504788 ZNF233A6NK53 670 aa5.36□□□□□ -1.55
LMNB1-208ENST00000504788 TMEM189-UBE2V1I3L0A0 370 aa5.36□□□□□ -1.55
LMNB1-208ENST00000504788 SPTLC1O15269 473 aa5.36□□□□□ -1.55
LMNB1-208ENST00000504788 CALUO43852 315 aaPredicted RBP5.36□□□□□ -1.55
LMNB1-208ENST00000504788 EXOC3O60645 756 aa5.36□□□□□ -1.55
LMNB1-208ENST00000504788 UPP2O95045 317 aa5.36□□□□□ -1.55
LMNB1-208ENST00000504788 POMCP01189 267 aa5.36□□□□□ -1.55
LMNB1-208ENST00000504788 CA3P07451 260 aa5.36□□□□□ -1.55
LMNB1-208ENST00000504788 GALTP07902 379 aa5.36□□□□□ -1.55
LMNB1-208ENST00000504788 CCDC192P0DO97 292 aa5.36□□□□□ -1.55
LMNB1-208ENST00000504788 HARSP12081 509 aaKnown RBP5.36□□□□□ -1.55
LMNB1-208ENST00000504788 CYP3A5P20815 502 aa5.36□□□□□ -1.55
LMNB1-208ENST00000504788 PSMC2P35998 433 aaKnown RBP5.36□□□□□ -1.55
LMNB1-208ENST00000504788 PBX3P40426 434 aa5.36□□□□□ -1.55
LMNB1-208ENST00000504788 ZNF165P49910 485 aa5.36□□□□□ -1.55
LMNB1-208ENST00000504788 SMAD3P84022 425 aaKnown RBP5.36□□□□□ -1.55
LMNB1-208ENST00000504788 MYL5Q02045 173 aa5.36□□□□□ -1.55
LMNB1-208ENST00000504788 NCBP1Q09161 790 aaKnown RBP5.36□□□□□ -1.55
LMNB1-208ENST00000504788 KYAT1Q16773 422 aa5.36□□□□□ -1.55
LMNB1-208ENST00000504788 TDRD10Q5VZ19 366 aaKnown RBP5.36□□□□□ -1.55
LMNB1-208ENST00000504788 LMBRD2Q68DH5 695 aaPredicted RBP5.36□□□□□ -1.55
LMNB1-208ENST00000504788 SASS6Q6UVJ0 657 aa5.36□□□□□ -1.55
LMNB1-208ENST00000504788 SV2AQ7L0J3 742 aa5.36□□□□□ -1.55
LMNB1-208ENST00000504788 FRMD5Q7Z6J6 570 aa5.36□□□□□ -1.55
LMNB1-208ENST00000504788 LUZP1Q86V48 1076 aa5.36□□□□□ -1.55
LMNB1-208ENST00000504788 NT5DC4Q86YG4 428 aa5.36□□□□□ -1.55
LMNB1-208ENST00000504788 WDR49Q8IV35 697 aa5.36□□□□□ -1.55
LMNB1-208ENST00000504788 PGBD4Q96DM1 585 aa5.36□□□□□ -1.55
LMNB1-208ENST00000504788 CCDC94Q9BW85 323 aaPredicted RBP5.36□□□□□ -1.55
LMNB1-208ENST00000504788 APOL6Q9BWW8 343 aa5.36□□□□□ -1.55
LMNB1-208ENST00000504788 TTYH1Q9H313 450 aaPredicted RBP5.36□□□□□ -1.55
LMNB1-208ENST00000504788 THAP9Q9H5L6 903 aa5.36□□□□□ -1.55
LMNB1-208ENST00000504788 VRTNQ9H8Y1 702 aa5.36□□□□□ -1.55
LMNB1-208ENST00000504788 UBN1Q9NPG3 1134 aa5.36□□□□□ -1.55
LMNB1-208ENST00000504788 DERAQ9Y315 318 aa5.36□□□□□ -1.55
LMNB1-208ENST00000504788 INSL6Q9Y581 213 aa5.36□□□□□ -1.55
LMNB1-208ENST00000504788 PCDHB7Q9Y5E2 793 aa5.36□□□□□ -1.55
LMNB1-208ENST00000504788 PCDHA11Q9Y5I1 949 aa5.36□□□□□ -1.55
LMNB1-208ENST00000504788 MTCL1Q9Y4B5 1905 aaKnown RBP5.36□□□□□ -1.55
LMNB1-208ENST00000504788 PRRC2BQ5JSZ5 2229 aaKnown RBP5.35□□□□□ -1.55
LMNB1-208ENST00000504788 NRP1O14786 923 aa5.35□□□□□ -1.55
LMNB1-208ENST00000504788 CETN3O15182 167 aa5.35□□□□□ -1.55
LMNB1-208ENST00000504788 LILRB3O75022 631 aa5.35□□□□□ -1.55
LMNB1-208ENST00000504788 IL18RAPO95256 599 aa5.35□□□□□ -1.55
LMNB1-208ENST00000504788 STAU1O95793 577 aaKnown RBP5.35□□□□□ -1.55
LMNB1-208ENST00000504788 THP07101 528 aa5.35□□□□□ -1.55
LMNB1-208ENST00000504788 TRIM49P0CI25 452 aa5.35□□□□□ -1.55
LMNB1-208ENST00000504788 TRIM49CP0CI26 452 aa5.35□□□□□ -1.55
LMNB1-208ENST00000504788 DNAJB1P25685 340 aa5.35□□□□□ -1.55
LMNB1-208ENST00000504788 DNAJB2P25686 324 aa5.35□□□□□ -1.55
LMNB1-208ENST00000504788 KCNJ6P48051 423 aa5.35□□□□□ -1.55
LMNB1-208ENST00000504788 SLC11A1P49279 550 aa5.35□□□□□ -1.55
LMNB1-208ENST00000504788 CLCNKBP51801 687 aa5.35□□□□□ -1.55
LMNB1-208ENST00000504788 ERVK-21P61565 698 aa5.35□□□□□ -1.55
LMNB1-208ENST00000504788 KCNMA1Q12791 1236 aa5.35□□□□□ -1.55
LMNB1-208ENST00000504788 TUSC3Q13454 348 aa5.35□□□□□ -1.55
LMNB1-208ENST00000504788 GSE1Q14687 1217 aa5.35□□□□□ -1.55
LMNB1-208ENST00000504788 EPC2Q52LR7 807 aa5.35□□□□□ -1.55
LMNB1-208ENST00000504788 TCP11X2Q5H9J9 407 aa5.35□□□□□ -1.55
LMNB1-208ENST00000504788 FAM117BQ6P1L5 589 aa5.35□□□□□ -1.55
LMNB1-208ENST00000504788 GLB1LQ6UWU2 654 aa5.35□□□□□ -1.55
LMNB1-208ENST00000504788 INTS8Q75QN2 995 aaKnown RBP5.35□□□□□ -1.55
LMNB1-208ENST00000504788 TRAPPC11Q7Z392 1133 aa5.35□□□□□ -1.55
LMNB1-208ENST00000504788 CD302Q8IX05 232 aa5.35□□□□□ -1.55
LMNB1-208ENST00000504788 FAM186BQ8IYM0 893 aa5.35□□□□□ -1.55
LMNB1-208ENST00000504788 SLC39A11Q8N1S5 342 aa5.35□□□□□ -1.55
LMNB1-208ENST00000504788 LRRC43Q8N309 656 aa5.35□□□□□ -1.55
LMNB1-208ENST00000504788 FAM200AQ8TCP9 573 aa5.35□□□□□ -1.55
LMNB1-208ENST00000504788 RABGGTAQ92696 567 aa5.35□□□□□ -1.55
LMNB1-208ENST00000504788 SEMA4DQ92854 862 aa5.35□□□□□ -1.55
LMNB1-208ENST00000504788 CNOT6LQ96LI5 555 aaKnown RBP5.35□□□□□ -1.55
LMNB1-208ENST00000504788 TSPAN18Q96SJ8 248 aa5.35□□□□□ -1.55
LMNB1-208ENST00000504788 CGRRF1Q99675 332 aa5.35□□□□□ -1.55
LMNB1-208ENST00000504788 C17orf80Q9BSJ5 609 aa5.35□□□□□ -1.55
LMNB1-208ENST00000504788 TRIM6Q9C030 488 aaPredicted RBP5.35□□□□□ -1.55
LMNB1-208ENST00000504788 MTMR12Q9C0I1 747 aa5.35□□□□□ -1.55
LMNB1-208ENST00000504788 RPF1Q9H9Y2 349 aaKnown RBP5.35□□□□□ -1.55
LMNB1-208ENST00000504788 SIX2Q9NPC8 291 aa5.35□□□□□ -1.55
LMNB1-208ENST00000504788 LIMA1Q9UHB6 759 aaKnown RBP5.35□□□□□ -1.55
LMNB1-208ENST00000504788 GREB1Q4ZG55 1949 aa5.35□□□□□ -1.55
LMNB1-208ENST00000504788 TBKBP1A7MCY6 615 aa5.34□□□□□ -1.55
LMNB1-208ENST00000504788 ZBBXA8MT70 800 aa5.34□□□□□ -1.55
LMNB1-208ENST00000504788 M0QZQ0 153 aa5.34□□□□□ -1.55
LMNB1-208ENST00000504788 HOXA2O43364 376 aa5.34□□□□□ -1.55
LMNB1-208ENST00000504788 TLL1O43897 1013 aa5.34□□□□□ -1.55
LMNB1-208ENST00000504788 TBC1D4O60343 1298 aa5.34□□□□□ -1.55
LMNB1-208ENST00000504788 KIF4AO95239 1232 aa5.34□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms