RNA–Protein interactions for RNA: ENST00000504663.1

TPM3-217, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 870 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-217ENST00000504663 SURF1Q15526 300 aa11.22□□□□□ -0.61
TPM3-217ENST00000504663 NAB2Q15742 525 aa11.22□□□□□ -0.61
TPM3-217ENST00000504663 KYAT1Q16773 422 aa11.22□□□□□ -0.61
TPM3-217ENST00000504663 SLC39A5Q6ZMH5 540 aa11.22□□□□□ -0.61
TPM3-217ENST00000504663 RRAGAQ7L523 313 aa11.22□□□□□ -0.61
TPM3-217ENST00000504663 TRAPPC11Q7Z392 1133 aa11.22□□□□□ -0.61
TPM3-217ENST00000504663 UBE2Q1Q7Z7E8 422 aa11.22□□□□□ -0.61
TPM3-217ENST00000504663 MRPL10Q7Z7H8 261 aaKnown RBP11.22□□□□□ -0.61
TPM3-217ENST00000504663 GSTCDQ8NEC7 633 aa11.22□□□□□ -0.61
TPM3-217ENST00000504663 CAGE1Q8TC20 777 aa11.22□□□□□ -0.61
TPM3-217ENST00000504663 ATRIPQ8WXE1 791 aa11.22□□□□□ -0.61
TPM3-217ENST00000504663 SHC3Q92529 594 aa11.22□□□□□ -0.61
TPM3-217ENST00000504663 VTI1AQ96AJ9 217 aa11.22□□□□□ -0.61
TPM3-217ENST00000504663 FNBP1Q96RU3 617 aa11.22□□□□□ -0.61
TPM3-217ENST00000504663 STK33Q9BYT3 514 aa11.22□□□□□ -0.61
TPM3-217ENST00000504663 WNT8AQ9H1J5 351 aa11.22□□□□□ -0.61
TPM3-217ENST00000504663 CHST12Q9NRB3 414 aa11.22□□□□□ -0.61
TPM3-217ENST00000504663 SPTLC3Q9NUV7 552 aa11.22□□□□□ -0.61
TPM3-217ENST00000504663 C2CD2Q9Y426 696 aa11.22□□□□□ -0.61
TPM3-217ENST00000504663 NUB1Q9Y5A7 615 aa11.22□□□□□ -0.61
TPM3-217ENST00000504663 PTPRSQ13332 1948 aa11.21□□□□□ -0.61
TPM3-217ENST00000504663 M0QZ92 97 aa11.21□□□□□ -0.61
TPM3-217ENST00000504663 PTGESO14684 152 aa11.21□□□□□ -0.61
TPM3-217ENST00000504663 PPEF2O14830 753 aa11.21□□□□□ -0.61
TPM3-217ENST00000504663 TRIM66O15016 1216 aa11.21□□□□□ -0.61
TPM3-217ENST00000504663 ZNF500O60304 480 aaPredicted RBP11.21□□□□□ -0.61
TPM3-217ENST00000504663 NBNO60934 754 aa11.21□□□□□ -0.61
TPM3-217ENST00000504663 ZC3H11AO75152 810 aaKnown RBP eCLIP11.21□□□□□ -0.61
TPM3-217ENST00000504663 KCNE1P15382 129 aa11.21□□□□□ -0.61
TPM3-217ENST00000504663 AKAP5P24588 427 aa11.21□□□□□ -0.61
TPM3-217ENST00000504663 GCNT1Q02742 428 aa11.21□□□□□ -0.61
TPM3-217ENST00000504663 FAAP100Q0VG06 881 aa11.21□□□□□ -0.61
TPM3-217ENST00000504663 PDAP1Q13442 181 aaKnown RBP11.21□□□□□ -0.61
TPM3-217ENST00000504663 NCOA4Q13772 614 aa11.21□□□□□ -0.61
TPM3-217ENST00000504663 DRAP1Q14919 205 aaPredicted RBP11.21□□□□□ -0.61
TPM3-217ENST00000504663 USP37Q86T82 979 aa11.21□□□□□ -0.61
TPM3-217ENST00000504663 ZNF598Q86UK7 904 aaKnown RBP11.21□□□□□ -0.61
TPM3-217ENST00000504663 RTN4RL1Q86UN2 441 aaPredicted RBP11.21□□□□□ -0.61
TPM3-217ENST00000504663 TMTC1Q8IUR5 882 aa11.21□□□□□ -0.61
TPM3-217ENST00000504663 REXO1L1PQ8IX06 675 aa11.21□□□□□ -0.61
TPM3-217ENST00000504663 ANKLE1Q8NAG6 615 aa11.21□□□□□ -0.61
TPM3-217ENST00000504663 ACAP3Q96P50 834 aa11.21□□□□□ -0.61
TPM3-217ENST00000504663 ADPGKQ9BRR6 497 aa11.21□□□□□ -0.61
TPM3-217ENST00000504663 PLEKHA5Q9HAU0 1116 aa11.21□□□□□ -0.61
TPM3-217ENST00000504663 RRAGDQ9NQL2 400 aaPredicted RBP11.21□□□□□ -0.61
TPM3-217ENST00000504663 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.21□□□□□ -0.61
TPM3-217ENST00000504663 FAM105AQ9NUU6 356 aa11.21□□□□□ -0.61
TPM3-217ENST00000504663 TUBGCP4Q9UGJ1 667 aa11.21□□□□□ -0.61
TPM3-217ENST00000504663 TBX21Q9UL17 535 aa11.21□□□□□ -0.61
TPM3-217ENST00000504663 DERAQ9Y315 318 aa11.21□□□□□ -0.61
TPM3-217ENST00000504663 ARIH1Q9Y4X5 557 aaPredicted RBP11.21□□□□□ -0.61
TPM3-217ENST00000504663 ADGRG1Q9Y653 693 aa11.21□□□□□ -0.61
TPM3-217ENST00000504663 KIAA0100Q14667 2235 aaKnown RBP11.21□□□□□ -0.62
TPM3-217ENST00000504663 TDRD15B5MCY1 1934 aaKnown RBP11.21□□□□□ -0.62
TPM3-217ENST00000504663 FOXN3O00409 490 aaPredicted RBP11.2□□□□□ -0.62
TPM3-217ENST00000504663 INPPL1O15357 1258 aa11.2□□□□□ -0.62
TPM3-217ENST00000504663 ZNF623O75123 536 aa11.2□□□□□ -0.62
TPM3-217ENST00000504663 LCA5LO95447 670 aa11.2□□□□□ -0.62
TPM3-217ENST00000504663 TPM1P09493 284 aa11.2□□□□□ -0.62
TPM3-217ENST00000504663 SELPP16109 830 aa11.2□□□□□ -0.62
TPM3-217ENST00000504663 SOX5P35711 763 aa11.2□□□□□ -0.62
TPM3-217ENST00000504663 PIK3CAP42336 1068 aa11.2□□□□□ -0.62
TPM3-217ENST00000504663 ASPAP45381 313 aa11.2□□□□□ -0.62
TPM3-217ENST00000504663 AFF1P51825 1210 aaKnown RBP11.2□□□□□ -0.62
TPM3-217ENST00000504663 MYL6P60660 151 aa11.2□□□□□ -0.62
TPM3-217ENST00000504663 SOX4Q06945 474 aaPredicted RBP11.2□□□□□ -0.62
TPM3-217ENST00000504663 PAK2Q13177 524 aa11.2□□□□□ -0.62
TPM3-217ENST00000504663 RAPGEF1Q13905 1077 aa11.2□□□□□ -0.62
TPM3-217ENST00000504663 DUOXA2Q1HG44 320 aa11.2□□□□□ -0.62
TPM3-217ENST00000504663 TRIM60Q495X7 471 aa11.2□□□□□ -0.62
TPM3-217ENST00000504663 CYP26C1Q6V0L0 522 aa11.2□□□□□ -0.62
TPM3-217ENST00000504663 AGMOQ6ZNB7 445 aa11.2□□□□□ -0.62
TPM3-217ENST00000504663 LRRC8DQ7L1W4 858 aa11.2□□□□□ -0.62
TPM3-217ENST00000504663 CACNA2D4Q7Z3S7 1137 aa11.2□□□□□ -0.62
TPM3-217ENST00000504663 FAM71AQ8IYT1 594 aa11.2□□□□□ -0.62
TPM3-217ENST00000504663 CCAR2Q8N163 923 aaKnown RBP11.2□□□□□ -0.62
TPM3-217ENST00000504663 USP38Q8NB14 1042 aa11.2□□□□□ -0.62
TPM3-217ENST00000504663 ACRBPQ8NEB7 543 aa11.2□□□□□ -0.62
TPM3-217ENST00000504663 C18orf25Q96B23 403 aaPredicted RBP11.2□□□□□ -0.62
TPM3-217ENST00000504663 TOX2Q96NM4 488 aa11.2□□□□□ -0.62
TPM3-217ENST00000504663 NT5C1BQ96P26 610 aa11.2□□□□□ -0.62
TPM3-217ENST00000504663 PPP1R10Q96QC0 940 aaKnown RBP11.2□□□□□ -0.62
TPM3-217ENST00000504663 DESI2Q9BSY9 194 aa11.2□□□□□ -0.62
TPM3-217ENST00000504663 CCDC94Q9BW85 323 aaPredicted RBP11.2□□□□□ -0.62
TPM3-217ENST00000504663 VRTNQ9H8Y1 702 aa11.2□□□□□ -0.62
TPM3-217ENST00000504663 RNF19AQ9NV58 838 aa11.2□□□□□ -0.62
TPM3-217ENST00000504663 CNTN6Q9UQ52 1028 aa11.2□□□□□ -0.62
TPM3-217ENST00000504663 NOD1Q9Y239 953 aa11.2□□□□□ -0.62
TPM3-217ENST00000504663 PCDHB2Q9Y5E7 798 aa11.2□□□□□ -0.62
TPM3-217ENST00000504663 SSU72P8A0A1W2PR75 194 aa11.19□□□□□ -0.62
TPM3-217ENST00000504663 GPR182O15218 404 aa11.19□□□□□ -0.62
TPM3-217ENST00000504663 EVI5O60447 810 aa11.19□□□□□ -0.62
TPM3-217ENST00000504663 PQBP1O60828 265 aaKnown RBP11.19□□□□□ -0.62
TPM3-217ENST00000504663 STAU1O95793 577 aaKnown RBP11.19□□□□□ -0.62
TPM3-217ENST00000504663 CXCL10P02778 98 aa11.19□□□□□ -0.62
TPM3-217ENST00000504663 SERPING1P05155 500 aa11.19□□□□□ -0.62
TPM3-217ENST00000504663 ZNF132P52740 706 aa11.19□□□□□ -0.62
TPM3-217ENST00000504663 ATN1P54259 1190 aaPredicted RBP11.19□□□□□ -0.62
TPM3-217ENST00000504663 NOP14P78316 857 aaKnown RBP11.19□□□□□ -0.62
TPM3-217ENST00000504663 TFAMQ00059 246 aaKnown RBP11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms