RNA–Protein interactions for RNA: ENST00000504289.1

COL1A1-210, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 481 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-210ENST00000504289 DUSP28Q4G0W2 176 aa10.49□□□□□ -0.73
COL1A1-210ENST00000504289 SPDYCQ5MJ68 293 aa10.49□□□□□ -0.73
COL1A1-210ENST00000504289 ATF7IP2Q5U623 682 aa10.49□□□□□ -0.73
COL1A1-210ENST00000504289 PLEKHH3Q7Z736 793 aa10.49□□□□□ -0.73
COL1A1-210ENST00000504289 ZNF410Q86VK4 478 aa10.49□□□□□ -0.73
COL1A1-210ENST00000504289 PHF13Q86YI8 300 aaPredicted RBP10.49□□□□□ -0.73
COL1A1-210ENST00000504289 CD302Q8IX05 232 aa10.49□□□□□ -0.73
COL1A1-210ENST00000504289 MCOLN2Q8IZK6 566 aa10.49□□□□□ -0.73
COL1A1-210ENST00000504289 UBR7Q8N806 425 aa10.49□□□□□ -0.73
COL1A1-210ENST00000504289 C1orf131Q8NDD1 294 aaKnown RBP10.49□□□□□ -0.73
COL1A1-210ENST00000504289 ZNF564Q8TBZ8 553 aaPredicted RBP10.49□□□□□ -0.73
COL1A1-210ENST00000504289 CD101Q93033 1021 aa10.49□□□□□ -0.73
COL1A1-210ENST00000504289 ZNF653Q96CK0 615 aa10.49□□□□□ -0.73
COL1A1-210ENST00000504289 ANKRD36BP1Q96IX9 119 aa10.49□□□□□ -0.73
COL1A1-210ENST00000504289 ZBTB45Q96K62 511 aaPredicted RBP10.49□□□□□ -0.73
COL1A1-210ENST00000504289 KRT12Q99456 494 aa10.49□□□□□ -0.73
COL1A1-210ENST00000504289 PSD3Q9NYI0 1048 aa10.49□□□□□ -0.73
COL1A1-210ENST00000504289 COG5Q9UP83 839 aa10.49□□□□□ -0.73
COL1A1-210ENST00000504289 PCDHA3Q9Y5H8 950 aa10.49□□□□□ -0.73
COL1A1-210ENST00000504289 SCINQ9Y6U3 715 aa10.49□□□□□ -0.73
COL1A1-210ENST00000504289 A6NNZ2 444 aa10.48□□□□□ -0.73
COL1A1-210ENST00000504289 SART1O43290 800 aaKnown RBP10.48□□□□□ -0.73
COL1A1-210ENST00000504289 OPA1O60313 960 aa10.48□□□□□ -0.73
COL1A1-210ENST00000504289 STAU1O95793 577 aaKnown RBP10.48□□□□□ -0.73
COL1A1-210ENST00000504289 SRGAP2CP0DJJ0 459 aa10.48□□□□□ -0.73
COL1A1-210ENST00000504289 INSRRP14616 1297 aa10.48□□□□□ -0.73
COL1A1-210ENST00000504289 OAS2P29728 719 aaKnown RBP10.48□□□□□ -0.73
COL1A1-210ENST00000504289 ATICP31939 592 aa10.48□□□□□ -0.73
COL1A1-210ENST00000504289 MAN1A1P33908 653 aa10.48□□□□□ -0.73
COL1A1-210ENST00000504289 NSFP46459 744 aaKnown RBP10.48□□□□□ -0.73
COL1A1-210ENST00000504289 PEX5P50542 639 aa10.48□□□□□ -0.73
COL1A1-210ENST00000504289 TAP1Q03518 808 aa10.48□□□□□ -0.73
COL1A1-210ENST00000504289 MBTD1Q05BQ5 628 aa10.48□□□□□ -0.73
COL1A1-210ENST00000504289 DRP2Q13474 957 aa10.48□□□□□ -0.73
COL1A1-210ENST00000504289 TUBB8Q3ZCM7 444 aa10.48□□□□□ -0.73
COL1A1-210ENST00000504289 GPR142Q7Z601 462 aa10.48□□□□□ -0.73
COL1A1-210ENST00000504289 DPP9Q86TI2 863 aa10.48□□□□□ -0.73
COL1A1-210ENST00000504289 RHPN2Q8IUC4 686 aa10.48□□□□□ -0.73
COL1A1-210ENST00000504289 EXOC4Q96A65 974 aa10.48□□□□□ -0.73
COL1A1-210ENST00000504289 MAML3Q96JK9 1138 aa10.48□□□□□ -0.73
COL1A1-210ENST00000504289 RNPC3Q96LT9 517 aaKnown RBP10.48□□□□□ -0.73
COL1A1-210ENST00000504289 TSPAN18Q96SJ8 248 aa10.48□□□□□ -0.73
COL1A1-210ENST00000504289 TINF2Q9BSI4 451 aa10.48□□□□□ -0.73
COL1A1-210ENST00000504289 NUP85Q9BW27 656 aa10.48□□□□□ -0.73
COL1A1-210ENST00000504289 NIF3L1Q9GZT8 377 aa10.48□□□□□ -0.73
COL1A1-210ENST00000504289 RAB17Q9H0T7 212 aa10.48□□□□□ -0.73
COL1A1-210ENST00000504289 R3HDMLQ9H3Y0 253 aa10.48□□□□□ -0.73
COL1A1-210ENST00000504289 VRTNQ9H8Y1 702 aa10.48□□□□□ -0.73
COL1A1-210ENST00000504289 PDGFCQ9NRA1 345 aa10.48□□□□□ -0.73
COL1A1-210ENST00000504289 FAM114A2Q9NRY5 505 aa10.48□□□□□ -0.73
COL1A1-210ENST00000504289 MTUS1Q9ULD2 1270 aa10.48□□□□□ -0.73
COL1A1-210ENST00000504289 HPCAL4Q9UM19 191 aa10.48□□□□□ -0.73
COL1A1-210ENST00000504289 PACSIN2Q9UNF0 486 aaPredicted RBP10.48□□□□□ -0.73
COL1A1-210ENST00000504289 PLXNB2O15031 1838 aa10.48□□□□□ -0.73
COL1A1-210ENST00000504289 MCM3APO60318 1980 aa10.48□□□□□ -0.73
COL1A1-210ENST00000504289 INO80B-WBP1J3KQ70 363 aa10.47□□□□□ -0.73
COL1A1-210ENST00000504289 PODXLO00592 558 aa10.47□□□□□ -0.73
COL1A1-210ENST00000504289 CAPN15O75808 1086 aa10.47□□□□□ -0.73
COL1A1-210ENST00000504289 SNAI1O95863 264 aaPredicted RBP10.47□□□□□ -0.73
COL1A1-210ENST00000504289 FGGP02679 453 aa10.47□□□□□ -0.73
COL1A1-210ENST00000504289 EDN1P05305 212 aa10.47□□□□□ -0.73
COL1A1-210ENST00000504289 CALB1P05937 261 aa10.47□□□□□ -0.73
COL1A1-210ENST00000504289 GLI1P08151 1106 aa10.47□□□□□ -0.73
COL1A1-210ENST00000504289 TMEM191BP0C7N4 346 aa10.47□□□□□ -0.73
COL1A1-210ENST00000504289 COMTP21964 271 aa10.47□□□□□ -0.73
COL1A1-210ENST00000504289 MARK3P27448 753 aa10.47□□□□□ -0.73
COL1A1-210ENST00000504289 GNA15P30679 374 aa10.47□□□□□ -0.73
COL1A1-210ENST00000504289 CHRNA3P32297 505 aa10.47□□□□□ -0.73
COL1A1-210ENST00000504289 TNNT3P45378 269 aaPredicted RBP10.47□□□□□ -0.73
COL1A1-210ENST00000504289 RWDD2BP57060 319 aa10.47□□□□□ -0.73
COL1A1-210ENST00000504289 TRPC3Q13507 836 aa10.47□□□□□ -0.73
COL1A1-210ENST00000504289 CYP1B1Q16678 543 aa10.47□□□□□ -0.73
COL1A1-210ENST00000504289 DGKDQ16760 1214 aa10.47□□□□□ -0.73
COL1A1-210ENST00000504289 ZNF568Q3ZCX4 644 aa10.47□□□□□ -0.73
COL1A1-210ENST00000504289 SEL1L2Q5TEA6 688 aa10.47□□□□□ -0.73
COL1A1-210ENST00000504289 TAF3Q5VWG9 929 aa10.47□□□□□ -0.73
COL1A1-210ENST00000504289 TRIM50Q86XT4 487 aa10.47□□□□□ -0.73
COL1A1-210ENST00000504289 LRRC71Q8N4P6 559 aa10.47□□□□□ -0.73
COL1A1-210ENST00000504289 RBBP8NLQ8NC74 664 aaPredicted RBP10.47□□□□□ -0.73
COL1A1-210ENST00000504289 OR5B17Q8NGF7 314 aa10.47□□□□□ -0.73
COL1A1-210ENST00000504289 HDAC7Q8WUI4 952 aa10.47□□□□□ -0.73
COL1A1-210ENST00000504289 LRRC45Q96CN5 670 aa10.47□□□□□ -0.73
COL1A1-210ENST00000504289 C16orf70Q9BSU1 422 aa10.47□□□□□ -0.73
COL1A1-210ENST00000504289 PI4K2AQ9BTU6 479 aa10.47□□□□□ -0.73
COL1A1-210ENST00000504289 INO80BQ9C086 356 aaPredicted RBP10.47□□□□□ -0.73
COL1A1-210ENST00000504289 RNPEPQ9H4A4 650 aa10.47□□□□□ -0.73
COL1A1-210ENST00000504289 RPF1Q9H9Y2 349 aaKnown RBP10.47□□□□□ -0.73
COL1A1-210ENST00000504289 CYP3A43Q9HB55 503 aa10.47□□□□□ -0.73
COL1A1-210ENST00000504289 APOBEC3GQ9HC16 384 aaKnown RBP10.47□□□□□ -0.73
COL1A1-210ENST00000504289 EPB41L5Q9HCM4 733 aa10.47□□□□□ -0.73
COL1A1-210ENST00000504289 HOMER3Q9NSC5 361 aa10.47□□□□□ -0.73
COL1A1-210ENST00000504289 EHD2Q9NZN4 543 aa10.47□□□□□ -0.73
COL1A1-210ENST00000504289 CNOT8Q9UFF9 292 aaKnown RBP10.47□□□□□ -0.73
COL1A1-210ENST00000504289 RASAL2Q9UJF2 1139 aa10.47□□□□□ -0.73
COL1A1-210ENST00000504289 PCDHGC3Q9UN70 934 aa10.47□□□□□ -0.73
COL1A1-210ENST00000504289 UTP11Q9Y3A2 253 aaKnown RBP10.47□□□□□ -0.73
COL1A1-210ENST00000504289 SBDSQ9Y3A5 250 aaKnown RBP eCLIP10.47□□□□□ -0.73
COL1A1-210ENST00000504289 Q9Y3F1 56 aa10.47□□□□□ -0.73
COL1A1-210ENST00000504289 NUB1Q9Y5A7 615 aa10.47□□□□□ -0.73
COL1A1-210ENST00000504289 PCDHB4Q9Y5E5 795 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms