RNA–Protein interactions for RNA: ENST00000503338.5

TOPBP1-202, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 3

Gene TOPBP1, Length 618 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-202ENST00000503338 UBN1Q9NPG3 1134 aa8.75□□□□□ -1.01
TOPBP1-202ENST00000503338 TRMT13Q9NUP7 481 aaKnown RBP8.75□□□□□ -1.01
TOPBP1-202ENST00000503338 CNTN3Q9P232 1028 aa8.75□□□□□ -1.01
TOPBP1-202ENST00000503338 ARHGAP20Q9P2F6 1191 aa8.75□□□□□ -1.01
TOPBP1-202ENST00000503338 TRIP12Q14669 1992 aaPredicted RBP8.75□□□□□ -1.01
TOPBP1-202ENST00000503338 RBAK-RBAKDNI3L0D1 243 aa8.74□□□□□ -1.01
TOPBP1-202ENST00000503338 KRT86O43790 486 aa8.74□□□□□ -1.01
TOPBP1-202ENST00000503338 EVI5O60447 810 aa8.74□□□□□ -1.01
TOPBP1-202ENST00000503338 ZNF623O75123 536 aa8.74□□□□□ -1.01
TOPBP1-202ENST00000503338 RECQL4O94761 1208 aa8.74□□□□□ -1.01
TOPBP1-202ENST00000503338 LCA5LO95447 670 aa8.74□□□□□ -1.01
TOPBP1-202ENST00000503338 VNN1O95497 513 aa8.74□□□□□ -1.01
TOPBP1-202ENST00000503338 ASS1P00966 412 aaKnown RBP8.74□□□□□ -1.01
TOPBP1-202ENST00000503338 TFRCP02786 760 aaKnown RBP8.74□□□□□ -1.01
TOPBP1-202ENST00000503338 CTSHP09668 335 aa8.74□□□□□ -1.01
TOPBP1-202ENST00000503338 CKBP12277 381 aa8.74□□□□□ -1.01
TOPBP1-202ENST00000503338 KCNE1P15382 129 aa8.74□□□□□ -1.01
TOPBP1-202ENST00000503338 SELPP16109 830 aa8.74□□□□□ -1.01
TOPBP1-202ENST00000503338 CYP3A5P20815 502 aa8.74□□□□□ -1.01
TOPBP1-202ENST00000503338 EIF4A3P38919 411 aaKnown RBP8.74□□□□□ -1.01
TOPBP1-202ENST00000503338 PNPLA4P41247 253 aa8.74□□□□□ -1.01
TOPBP1-202ENST00000503338 KIF11P52732 1056 aa8.74□□□□□ -1.01
TOPBP1-202ENST00000503338 WNT7BP56706 349 aa8.74□□□□□ -1.01
TOPBP1-202ENST00000503338 MYO1EQ12965 1108 aa8.74□□□□□ -1.01
TOPBP1-202ENST00000503338 CUL2Q13617 745 aa8.74□□□□□ -1.01
TOPBP1-202ENST00000503338 MTFR1Q15390 333 aa8.74□□□□□ -1.01
TOPBP1-202ENST00000503338 PTPN14Q15678 1187 aa8.74□□□□□ -1.01
TOPBP1-202ENST00000503338 SLC18A3Q16572 532 aa8.74□□□□□ -1.01
TOPBP1-202ENST00000503338 ARHGAP44Q17R89 818 aa8.74□□□□□ -1.01
TOPBP1-202ENST00000503338 ZNF699Q32M78 642 aa8.74□□□□□ -1.01
TOPBP1-202ENST00000503338 ARHGAP29Q52LW3 1261 aa8.74□□□□□ -1.01
TOPBP1-202ENST00000503338 XKR4Q5GH76 650 aa8.74□□□□□ -1.01
TOPBP1-202ENST00000503338 ZNF618Q5T7W0 954 aa8.74□□□□□ -1.01
TOPBP1-202ENST00000503338 HGSNATQ68CP4 663 aa8.74□□□□□ -1.01
TOPBP1-202ENST00000503338 LMBRD2Q68DH5 695 aaPredicted RBP8.74□□□□□ -1.01
TOPBP1-202ENST00000503338 JADE1Q6IE81 842 aa8.74□□□□□ -1.01
TOPBP1-202ENST00000503338 PPP1R2P3Q6NXS1 205 aa8.74□□□□□ -1.01
TOPBP1-202ENST00000503338 ALKAL1Q6UXT8 129 aa8.74□□□□□ -1.01
TOPBP1-202ENST00000503338 IRF2BP2Q7Z5L9 587 aa8.74□□□□□ -1.01
TOPBP1-202ENST00000503338 ZNF677Q86XU0 584 aa8.74□□□□□ -1.01
TOPBP1-202ENST00000503338 ARHGEF19Q8IW93 802 aa8.74□□□□□ -1.01
TOPBP1-202ENST00000503338 FAM126BQ8IXS8 530 aa8.74□□□□□ -1.01
TOPBP1-202ENST00000503338 EFCAB13Q8IY85 973 aa8.74□□□□□ -1.01
TOPBP1-202ENST00000503338 FAM71AQ8IYT1 594 aa8.74□□□□□ -1.01
TOPBP1-202ENST00000503338 OR5B17Q8NGF7 314 aa8.74□□□□□ -1.01
TOPBP1-202ENST00000503338 U2AF1L4Q8WU68 220 aaKnown RBP8.74□□□□□ -1.01
TOPBP1-202ENST00000503338 RSPH1Q8WYR4 309 aa8.74□□□□□ -1.01
TOPBP1-202ENST00000503338 PGBD4Q96DM1 585 aa8.74□□□□□ -1.01
TOPBP1-202ENST00000503338 TOX2Q96NM4 488 aa8.74□□□□□ -1.01
TOPBP1-202ENST00000503338 EIF2AQ9BY44 585 aaKnown RBP8.74□□□□□ -1.01
TOPBP1-202ENST00000503338 DNAI2Q9GZS0 605 aa8.74□□□□□ -1.01
TOPBP1-202ENST00000503338 NIF3L1Q9GZT8 377 aa8.74□□□□□ -1.01
TOPBP1-202ENST00000503338 FAM105AQ9NUU6 356 aa8.74□□□□□ -1.01
TOPBP1-202ENST00000503338 SLC38A7Q9NVC3 462 aa8.74□□□□□ -1.01
TOPBP1-202ENST00000503338 SNTG2Q9NY99 539 aa8.74□□□□□ -1.01
TOPBP1-202ENST00000503338 MYO1AQ9UBC5 1043 aa8.74□□□□□ -1.01
TOPBP1-202ENST00000503338 UBQLN1Q9UMX0 589 aaKnown RBP8.74□□□□□ -1.01
TOPBP1-202ENST00000503338 GIT1Q9Y2X7 761 aa8.74□□□□□ -1.01
TOPBP1-202ENST00000503338 IPPQ9Y573 584 aa8.74□□□□□ -1.01
TOPBP1-202ENST00000503338 PTPRJQ12913 1337 aa8.74□□□□□ -1.01
TOPBP1-202ENST00000503338 DCDC2CA8MYV0 355 aa8.73□□□□□ -1.01
TOPBP1-202ENST00000503338 FOXN3O00409 490 aaPredicted RBP8.73□□□□□ -1.01
TOPBP1-202ENST00000503338 CLSTN1O94985 981 aa8.73□□□□□ -1.01
TOPBP1-202ENST00000503338 NFICP08651 508 aa8.73□□□□□ -1.01
TOPBP1-202ENST00000503338 GHRP10912 638 aa8.73□□□□□ -1.01
TOPBP1-202ENST00000503338 COL6A1P12109 1028 aa8.73□□□□□ -1.01
TOPBP1-202ENST00000503338 ITGA4P13612 1032 aa8.73□□□□□ -1.01
TOPBP1-202ENST00000503338 PAX3P23760 479 aa8.73□□□□□ -1.01
TOPBP1-202ENST00000503338 GJA8P48165 433 aa8.73□□□□□ -1.01
TOPBP1-202ENST00000503338 PDE6CP51160 858 aa8.73□□□□□ -1.01
TOPBP1-202ENST00000503338 APBA1Q02410 837 aa8.73□□□□□ -1.01
TOPBP1-202ENST00000503338 PTK2Q05397 1052 aa8.73□□□□□ -1.01
TOPBP1-202ENST00000503338 KIF5AQ12840 1032 aa8.73□□□□□ -1.01
TOPBP1-202ENST00000503338 LPIN1Q14693 890 aa8.73□□□□□ -1.01
TOPBP1-202ENST00000503338 ASTE1Q2TB18 679 aaPredicted RBP8.73□□□□□ -1.01
TOPBP1-202ENST00000503338 ZNF667Q5HYK9 610 aa8.73□□□□□ -1.01
TOPBP1-202ENST00000503338 DNTTIP2Q5QJE6 756 aaKnown RBP8.73□□□□□ -1.01
TOPBP1-202ENST00000503338 UBXN11Q5T124 520 aa8.73□□□□□ -1.01
TOPBP1-202ENST00000503338 GJB7Q6PEY0 223 aa8.73□□□□□ -1.01
TOPBP1-202ENST00000503338 TOGARAM2Q6ZUX3 1019 aa8.73□□□□□ -1.01
TOPBP1-202ENST00000503338 ANKRD33Q7Z3H0 272 aa8.73□□□□□ -1.01
TOPBP1-202ENST00000503338 MRPL10Q7Z7H8 261 aaKnown RBP8.73□□□□□ -1.01
TOPBP1-202ENST00000503338 KIAA1328Q86T90 577 aa8.73□□□□□ -1.01
TOPBP1-202ENST00000503338 TMEM192Q8IY95 271 aa8.73□□□□□ -1.01
TOPBP1-202ENST00000503338 LRRC52Q8N7C0 313 aa8.73□□□□□ -1.01
TOPBP1-202ENST00000503338 C1orf127Q8N9H9 656 aa8.73□□□□□ -1.01
TOPBP1-202ENST00000503338 APBB2Q92870 758 aa8.73□□□□□ -1.01
TOPBP1-202ENST00000503338 WNT8BQ93098 351 aa8.73□□□□□ -1.01
TOPBP1-202ENST00000503338 PPP1R13BQ96KQ4 1090 aa8.73□□□□□ -1.01
TOPBP1-202ENST00000503338 CALR3Q96L12 384 aaKnown RBP8.73□□□□□ -1.01
TOPBP1-202ENST00000503338 ZNF560Q96MR9 790 aa8.73□□□□□ -1.01
TOPBP1-202ENST00000503338 RPS6KC1Q96S38 1066 aa8.73□□□□□ -1.01
TOPBP1-202ENST00000503338 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP8.73□□□□□ -1.01
TOPBP1-202ENST00000503338 IFIH1Q9BYX4 1025 aaKnown RBP8.73□□□□□ -1.01
TOPBP1-202ENST00000503338 GPR88Q9GZN0 384 aa8.73□□□□□ -1.01
TOPBP1-202ENST00000503338 NXF3Q9H4D5 531 aaKnown RBP8.73□□□□□ -1.01
TOPBP1-202ENST00000503338 CYP3A43Q9HB55 503 aa8.73□□□□□ -1.01
TOPBP1-202ENST00000503338 TRMT1Q9NXH9 659 aaKnown RBP8.73□□□□□ -1.01
TOPBP1-202ENST00000503338 DPP3Q9NY33 737 aa8.73□□□□□ -1.01
TOPBP1-202ENST00000503338 PARP2Q9UGN5 583 aa8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms