RNA–Protein interactions for RNA: ENST00000502313.1

HMGB1P21-201, Transcript of high mobility group box 1 pseudogene 21, humanhuman

BASIC

Gene HMGB1P21, Length 581 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P21-201ENST00000502313 SSH1Q8WYL5 1049 aa4.88□□□□□ -1.63
HMGB1P21-201ENST00000502313 HTRA1Q92743 480 aa4.88□□□□□ -1.63
HMGB1P21-201ENST00000502313 MAP6Q96JE9 813 aa4.88□□□□□ -1.63
HMGB1P21-201ENST00000502313 ACAP3Q96P50 834 aa4.88□□□□□ -1.63
HMGB1P21-201ENST00000502313 DESI2Q9BSY9 194 aa4.88□□□□□ -1.63
HMGB1P21-201ENST00000502313 JAM3Q9BX67 310 aa4.88□□□□□ -1.63
HMGB1P21-201ENST00000502313 XPO4Q9C0E2 1151 aaKnown RBP4.88□□□□□ -1.63
HMGB1P21-201ENST00000502313 GHITMQ9H3K2 345 aa4.88□□□□□ -1.63
HMGB1P21-201ENST00000502313 ZMAT3Q9HA38 289 aaKnown RBP4.88□□□□□ -1.63
HMGB1P21-201ENST00000502313 CARS2Q9HA77 564 aaKnown RBP4.88□□□□□ -1.63
HMGB1P21-201ENST00000502313 PLSCR4Q9NRQ2 329 aa4.88□□□□□ -1.63
HMGB1P21-201ENST00000502313 ATP8A2Q9NTI2 1148 aa4.88□□□□□ -1.63
HMGB1P21-201ENST00000502313 SLAMF8Q9P0V8 285 aa4.88□□□□□ -1.63
HMGB1P21-201ENST00000502313 KIF17Q9P2E2 1029 aa4.88□□□□□ -1.63
HMGB1P21-201ENST00000502313 ZC3H7BQ9UGR2 993 aaKnown RBP4.88□□□□□ -1.63
HMGB1P21-201ENST00000502313 VAV3Q9UKW4 847 aa4.88□□□□□ -1.63
HMGB1P21-201ENST00000502313 PLAGL2Q9UPG8 496 aa4.88□□□□□ -1.63
HMGB1P21-201ENST00000502313 RWDD3Q9Y3V2 267 aa4.88□□□□□ -1.63
HMGB1P21-201ENST00000502313 NR2E3Q9Y5X4 410 aa4.88□□□□□ -1.63
HMGB1P21-201ENST00000502313 PPLO60437 1756 aa4.88□□□□□ -1.63
HMGB1P21-201ENST00000502313 PTCH1Q13635 1447 aa4.88□□□□□ -1.63
HMGB1P21-201ENST00000502313 MYOM2P54296 1465 aa4.88□□□□□ -1.63
HMGB1P21-201ENST00000502313 ADGRB1O14514 1584 aa4.87□□□□□ -1.63
HMGB1P21-201ENST00000502313 LAMC1P11047 1609 aa4.87□□□□□ -1.63
HMGB1P21-201ENST00000502313 A0A087X0M5 115 aa4.87□□□□□ -1.63
HMGB1P21-201ENST00000502313 LOC100996750A0A140TA64 210 aa4.87□□□□□ -1.63
HMGB1P21-201ENST00000502313 A0A1B0GX30 115 aa4.87□□□□□ -1.63
HMGB1P21-201ENST00000502313 WTIPA6NIX2 430 aaPredicted RBP4.87□□□□□ -1.63
HMGB1P21-201ENST00000502313 DKC1O60832 514 aaKnown RBP eCLIP4.87□□□□□ -1.63
HMGB1P21-201ENST00000502313 DTNBO60941 627 aa4.87□□□□□ -1.63
HMGB1P21-201ENST00000502313 IDEP14735 1019 aa4.87□□□□□ -1.63
HMGB1P21-201ENST00000502313 CTSSP25774 331 aa4.87□□□□□ -1.63
HMGB1P21-201ENST00000502313 KIR2DL1P43626 348 aaPredicted RBP4.87□□□□□ -1.63
HMGB1P21-201ENST00000502313 KIR2DL2P43627 348 aaPredicted RBP4.87□□□□□ -1.63
HMGB1P21-201ENST00000502313 NAP1L1P55209 391 aaKnown RBP4.87□□□□□ -1.63
HMGB1P21-201ENST00000502313 CORO7P57737 925 aa4.87□□□□□ -1.63
HMGB1P21-201ENST00000502313 RTP1P59025 263 aa4.87□□□□□ -1.63
HMGB1P21-201ENST00000502313 BPIFB3P59826 476 aa4.87□□□□□ -1.63
HMGB1P21-201ENST00000502313 LACTBP83111 547 aaPredicted RBP4.87□□□□□ -1.63
HMGB1P21-201ENST00000502313 CREMQ03060 361 aa4.87□□□□□ -1.63
HMGB1P21-201ENST00000502313 CHRNEQ04844 493 aa4.87□□□□□ -1.63
HMGB1P21-201ENST00000502313 DOC2BQ14184 412 aa4.87□□□□□ -1.63
HMGB1P21-201ENST00000502313 SPARCL1Q14515 664 aa4.87□□□□□ -1.63
HMGB1P21-201ENST00000502313 PSMD6Q15008 389 aa4.87□□□□□ -1.63
HMGB1P21-201ENST00000502313 FSCN1Q16658 493 aaKnown RBP4.87□□□□□ -1.63
HMGB1P21-201ENST00000502313 UGT8Q16880 541 aa4.87□□□□□ -1.63
HMGB1P21-201ENST00000502313 C3orf36Q3SXR2 165 aa4.87□□□□□ -1.63
HMGB1P21-201ENST00000502313 HECTD3Q5T447 861 aa4.87□□□□□ -1.63
HMGB1P21-201ENST00000502313 MROH9Q5TGP6 573 aa4.87□□□□□ -1.63
HMGB1P21-201ENST00000502313 ESRP1Q6NXG1 681 aaKnown RBP4.87□□□□□ -1.63
HMGB1P21-201ENST00000502313 GALNT18Q6P9A2 607 aa4.87□□□□□ -1.63
HMGB1P21-201ENST00000502313 ARHGAP36Q6ZRI8 547 aa4.87□□□□□ -1.63
HMGB1P21-201ENST00000502313 NBPF11Q86T75 865 aa4.87□□□□□ -1.63
HMGB1P21-201ENST00000502313 GALNT13Q8IUC8 556 aa4.87□□□□□ -1.63
HMGB1P21-201ENST00000502313 NLGN4XQ8N0W4 816 aa4.87□□□□□ -1.63
HMGB1P21-201ENST00000502313 TXLNBQ8N3L3 684 aa4.87□□□□□ -1.63
HMGB1P21-201ENST00000502313 OXR1Q8N573 874 aa4.87□□□□□ -1.63
HMGB1P21-201ENST00000502313 ANKS4BQ8N8V4 417 aa4.87□□□□□ -1.63
HMGB1P21-201ENST00000502313 CCDC191Q8NCU4 936 aa4.87□□□□□ -1.63
HMGB1P21-201ENST00000502313 OR10H5Q8NGA6 315 aa4.87□□□□□ -1.63
HMGB1P21-201ENST00000502313 RTF1Q92541 710 aaKnown RBP4.87□□□□□ -1.63
HMGB1P21-201ENST00000502313 ERCC4Q92889 916 aaPredicted RBP4.87□□□□□ -1.63
HMGB1P21-201ENST00000502313 MUL1Q969V5 352 aa4.87□□□□□ -1.63
HMGB1P21-201ENST00000502313 ZNF566Q969W8 418 aa4.87□□□□□ -1.63
HMGB1P21-201ENST00000502313 MPHOSPH8Q99549 860 aa4.87□□□□□ -1.63
HMGB1P21-201ENST00000502313 MRPL9Q9BYD2 267 aaKnown RBP4.87□□□□□ -1.63
HMGB1P21-201ENST00000502313 KRTAP4-6Q9BYQ5 205 aa4.87□□□□□ -1.63
HMGB1P21-201ENST00000502313 AP5M1Q9H0R1 490 aa4.87□□□□□ -1.63
HMGB1P21-201ENST00000502313 SEMA4AQ9H3S1 761 aa4.87□□□□□ -1.63
HMGB1P21-201ENST00000502313 DBNDD1Q9H9R9 158 aa4.87□□□□□ -1.63
HMGB1P21-201ENST00000502313 SMURF1Q9HCE7 757 aa4.87□□□□□ -1.63
HMGB1P21-201ENST00000502313 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP4.87□□□□□ -1.63
HMGB1P21-201ENST00000502313 ADGRE2Q9UHX3 823 aa4.87□□□□□ -1.63
HMGB1P21-201ENST00000502313 MSRAQ9UJ68 235 aa4.87□□□□□ -1.63
HMGB1P21-201ENST00000502313 ODF2LQ9ULJ1 636 aa4.87□□□□□ -1.63
HMGB1P21-201ENST00000502313 SLC5A6Q9Y289 635 aa4.87□□□□□ -1.63
HMGB1P21-201ENST00000502313 STXBP5LQ9Y2K9 1186 aa4.87□□□□□ -1.63
HMGB1P21-201ENST00000502313 U3KQE9 123 aa4.87□□□□□ -1.63
HMGB1P21-201ENST00000502313 ADGRF5Q8IZF2 1346 aa4.87□□□□□ -1.63
HMGB1P21-201ENST00000502313 DCCP43146 1447 aa4.87□□□□□ -1.63
HMGB1P21-201ENST00000502313 SRCAPQ6ZRS2 3230 aa4.86□□□□□ -1.63
HMGB1P21-201ENST00000502313 A0A088AWK7 358 aa4.86□□□□□ -1.63
HMGB1P21-201ENST00000502313 GOLGA6L3A6NEY3 463 aa4.86□□□□□ -1.63
HMGB1P21-201ENST00000502313 PGPEP1LA6NFU8 196 aa4.86□□□□□ -1.63
HMGB1P21-201ENST00000502313 ARHGAP6O43182 974 aa4.86□□□□□ -1.63
HMGB1P21-201ENST00000502313 HTRA2O43464 458 aaPredicted RBP4.86□□□□□ -1.63
HMGB1P21-201ENST00000502313 USP2O75604 605 aaPredicted RBP4.86□□□□□ -1.63
HMGB1P21-201ENST00000502313 SOAT2O75908 522 aa4.86□□□□□ -1.63
HMGB1P21-201ENST00000502313 IL18RAPO95256 599 aa4.86□□□□□ -1.63
HMGB1P21-201ENST00000502313 ESR1P03372 595 aa4.86□□□□□ -1.63
HMGB1P21-201ENST00000502313 LPLP06858 475 aa4.86□□□□□ -1.63
HMGB1P21-201ENST00000502313 SLC3A2P08195 630 aaKnown RBP4.86□□□□□ -1.63
HMGB1P21-201ENST00000502313 PARP1P09874 1014 aaKnown RBP4.86□□□□□ -1.63
HMGB1P21-201ENST00000502313 TMEM253P0C7T8 217 aa4.86□□□□□ -1.63
HMGB1P21-201ENST00000502313 COL6A2P12110 1019 aa4.86□□□□□ -1.63
HMGB1P21-201ENST00000502313 MUTP22033 750 aa4.86□□□□□ -1.63
HMGB1P21-201ENST00000502313 PSMA3P25788 255 aa4.86□□□□□ -1.63
HMGB1P21-201ENST00000502313 EEF1GP26641 437 aaKnown RBP4.86□□□□□ -1.63
HMGB1P21-201ENST00000502313 SERPINF1P36955 418 aa4.86□□□□□ -1.63
HMGB1P21-201ENST00000502313 ARL4AP40617 200 aa4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms