RNA–Protein interactions for RNA: ENST00000497663.1

TNRC18-210, Transcript of trinucleotide repeat containing 18, humanhuman

TSL 2

Gene TNRC18, Length 588 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC18-210ENST00000497663 GDAQ9Y2T3 454 aa16.7■□□□□ 0.26
TNRC18-210ENST00000497663 PCDHB6Q9Y5E3 794 aa16.7■□□□□ 0.26
TNRC18-210ENST00000497663 WDR87Q6ZQQ6 2873 aa16.7■□□□□ 0.26
TNRC18-210ENST00000497663 COL4A3Q01955 1670 aa16.69■□□□□ 0.26
TNRC18-210ENST00000497663 ARHGEF35A5YM69 484 aa16.69■□□□□ 0.26
TNRC18-210ENST00000497663 CARNS1A5YM72 827 aa16.69■□□□□ 0.26
TNRC18-210ENST00000497663 E9PMD0 336 aa16.69■□□□□ 0.26
TNRC18-210ENST00000497663 ACKR2O00590 384 aa16.69■□□□□ 0.26
TNRC18-210ENST00000497663 TADA2AO75478 443 aa16.69■□□□□ 0.26
TNRC18-210ENST00000497663 PRPF4BQ13523 1007 aaKnown RBP16.69■□□□□ 0.26
TNRC18-210ENST00000497663 TDGQ13569 410 aa16.69■□□□□ 0.26
TNRC18-210ENST00000497663 USP41Q3LFD5 358 aa16.69■□□□□ 0.26
TNRC18-210ENST00000497663 C8orf34Q49A92 452 aa16.69■□□□□ 0.26
TNRC18-210ENST00000497663 OTOP3Q7RTS5 596 aa16.69■□□□□ 0.26
TNRC18-210ENST00000497663 TAS1R3Q7RTX0 852 aa16.69■□□□□ 0.26
TNRC18-210ENST00000497663 MCPH1Q8NEM0 835 aa16.69■□□□□ 0.26
TNRC18-210ENST00000497663 FLCNQ8NFG4 579 aa16.69■□□□□ 0.26
TNRC18-210ENST00000497663 LNX1Q8TBB1 728 aaPredicted RBP16.69■□□□□ 0.26
TNRC18-210ENST00000497663 ZNF592Q92610 1267 aa16.69■□□□□ 0.26
TNRC18-210ENST00000497663 IRX2Q9BZI1 471 aaPredicted RBP16.69■□□□□ 0.26
TNRC18-210ENST00000497663 GOLGA2P5Q9HBQ8 144 aa16.69■□□□□ 0.26
TNRC18-210ENST00000497663 KIAA1024Q9UPX6 916 aa16.69■□□□□ 0.26
TNRC18-210ENST00000497663 DOCK8Q8NF50 2099 aa16.69■□□□□ 0.26
TNRC18-210ENST00000497663 RIF1Q5UIP0 2472 aaKnown RBP16.69■□□□□ 0.26
TNRC18-210ENST00000497663 CLUHO75153 1309 aa16.69■□□□□ 0.26
TNRC18-210ENST00000497663 KRBA1A5PL33 1030 aa16.68■□□□□ 0.26
TNRC18-210ENST00000497663 I3L4J1 428 aa16.68■□□□□ 0.26
TNRC18-210ENST00000497663 PAPLNO95428 1278 aa16.68■□□□□ 0.26
TNRC18-210ENST00000497663 GBP2P32456 591 aaPredicted RBP16.68■□□□□ 0.26
TNRC18-210ENST00000497663 CCT6AP40227 531 aaKnown RBP16.68■□□□□ 0.26
TNRC18-210ENST00000497663 SOX4Q06945 474 aaPredicted RBP16.68■□□□□ 0.26
TNRC18-210ENST00000497663 TUSC3Q13454 348 aa16.68■□□□□ 0.26
TNRC18-210ENST00000497663 ARID5BQ14865 1188 aa16.68■□□□□ 0.26
TNRC18-210ENST00000497663 LAPTM4AQ15012 233 aa16.68■□□□□ 0.26
TNRC18-210ENST00000497663 SAFBQ15424 915 aaKnown RBP eCLIP16.68■□□□□ 0.26
TNRC18-210ENST00000497663 FAM171A1Q5VUB5 890 aa16.68■□□□□ 0.26
TNRC18-210ENST00000497663 CEP57Q86XR8 500 aa16.68■□□□□ 0.26
TNRC18-210ENST00000497663 C3orf58Q8NDZ4 430 aa16.68■□□□□ 0.26
TNRC18-210ENST00000497663 ACSF2Q96CM8 615 aaPredicted RBP16.68■□□□□ 0.26
TNRC18-210ENST00000497663 PRIMPOLQ96LW4 560 aa16.68■□□□□ 0.26
TNRC18-210ENST00000497663 LLPHQ9BRT6 129 aaKnown RBP16.68■□□□□ 0.26
TNRC18-210ENST00000497663 MMTAG2Q9BU76 263 aaKnown RBP16.68■□□□□ 0.26
TNRC18-210ENST00000497663 TOR4AQ9NXH8 423 aa16.68■□□□□ 0.26
TNRC18-210ENST00000497663 DUSP12Q9UNI6 340 aa16.68■□□□□ 0.26
TNRC18-210ENST00000497663 NAMPTP43490 491 aa16.67■□□□□ 0.26
TNRC18-210ENST00000497663 VAC14Q08AM6 782 aa16.67■□□□□ 0.26
TNRC18-210ENST00000497663 ASCL5Q7RTU5 278 aa16.67■□□□□ 0.26
TNRC18-210ENST00000497663 ZBTB8OSQ8IWT0 167 aa16.67■□□□□ 0.26
TNRC18-210ENST00000497663 SIX5Q8N196 739 aa16.67■□□□□ 0.26
TNRC18-210ENST00000497663 DEPTORQ8TB45 409 aa16.67■□□□□ 0.26
TNRC18-210ENST00000497663 RUSC1Q9BVN2 902 aa16.67■□□□□ 0.26
TNRC18-210ENST00000497663 DDX19AQ9NUU7 478 aaKnown RBP16.67■□□□□ 0.26
TNRC18-210ENST00000497663 FNIP2Q9P278 1114 aa16.67■□□□□ 0.26
TNRC18-210ENST00000497663 STK39Q9UEW8 545 aa16.67■□□□□ 0.26
TNRC18-210ENST00000497663 CDV3Q9UKY7 258 aaKnown RBP16.67■□□□□ 0.26
TNRC18-210ENST00000497663 PCDHB9Q9Y5E1 797 aa16.67■□□□□ 0.26
TNRC18-210ENST00000497663 PTPRZ1P23471 2315 aaPredicted RBP16.67■□□□□ 0.26
TNRC18-210ENST00000497663 VWA8A3KMH1 1905 aa16.66■□□□□ 0.26
TNRC18-210ENST00000497663 N4BP3O15049 544 aa16.66■□□□□ 0.26
TNRC18-210ENST00000497663 MAPK7Q13164 816 aa16.66■□□□□ 0.26
TNRC18-210ENST00000497663 MAPK6Q16659 721 aa16.66■□□□□ 0.26
TNRC18-210ENST00000497663 GET4Q7L5D6 327 aaPredicted RBP16.66■□□□□ 0.26
TNRC18-210ENST00000497663 HACE1Q8IYU2 909 aa16.66■□□□□ 0.26
TNRC18-210ENST00000497663 SLC44A3Q8N4M1 653 aa16.66■□□□□ 0.26
TNRC18-210ENST00000497663 EPS15L1Q9UBC2 864 aa16.66■□□□□ 0.26
TNRC18-210ENST00000497663 LRWD1Q9UFC0 647 aa16.66■□□□□ 0.26
TNRC18-210ENST00000497663 FBXW11Q9UKB1 542 aa16.66■□□□□ 0.26
TNRC18-210ENST00000497663 SSX2IPQ9Y2D8 614 aa16.66■□□□□ 0.26
TNRC18-210ENST00000497663 SFI1A8K8P3 1242 aa16.65■□□□□ 0.26
TNRC18-210ENST00000497663 NRG2O14511 850 aaPredicted RBP16.65■□□□□ 0.26
TNRC18-210ENST00000497663 THP07101 528 aa16.65■□□□□ 0.26
TNRC18-210ENST00000497663 U2AF2P26368 475 aaKnown RBP eCLIP16.65■□□□□ 0.26
TNRC18-210ENST00000497663 BRCC3P46736 316 aa16.65■□□□□ 0.26
TNRC18-210ENST00000497663 RBM25P49756 843 aaKnown RBP16.65■□□□□ 0.26
TNRC18-210ENST00000497663 CLCNKBP51801 687 aa16.65■□□□□ 0.26
TNRC18-210ENST00000497663 OSTNP61366 133 aa16.65■□□□□ 0.26
TNRC18-210ENST00000497663 PSMD5Q16401 504 aa16.65■□□□□ 0.26
TNRC18-210ENST00000497663 ATF7IP2Q5U623 682 aa16.65■□□□□ 0.26
TNRC18-210ENST00000497663 VASH1Q7L8A9 365 aaPredicted RBP16.65■□□□□ 0.26
TNRC18-210ENST00000497663 GRASPQ7Z6J2 395 aaPredicted RBP16.65■□□□□ 0.26
TNRC18-210ENST00000497663 IGSF22Q8N9C0 903 aa16.65■□□□□ 0.26
TNRC18-210ENST00000497663 ERMNQ8TAM6 284 aa16.65■□□□□ 0.26
TNRC18-210ENST00000497663 SNX29Q8TEQ0 813 aa16.65■□□□□ 0.26
TNRC18-210ENST00000497663 PIK3R5Q8WYR1 880 aa16.65■□□□□ 0.26
TNRC18-210ENST00000497663 ZMAT2Q96NC0 199 aaKnown RBP16.65■□□□□ 0.26
TNRC18-210ENST00000497663 CDK15Q96Q40 435 aa16.65■□□□□ 0.26
TNRC18-210ENST00000497663 PPP1R10Q96QC0 940 aaKnown RBP16.65■□□□□ 0.26
TNRC18-210ENST00000497663 PRRX2Q99811 253 aa16.65■□□□□ 0.26
TNRC18-210ENST00000497663 TTPALQ9BTX7 342 aa16.65■□□□□ 0.26
TNRC18-210ENST00000497663 C2orf40Q9H1Z8 148 aa16.65■□□□□ 0.26
TNRC18-210ENST00000497663 MFSD1Q9H3U5 465 aa16.65■□□□□ 0.26
TNRC18-210ENST00000497663 PTPRHQ9HD43 1115 aa16.65■□□□□ 0.26
TNRC18-210ENST00000497663 HCFC1R1Q9NWW0 138 aa16.65■□□□□ 0.26
TNRC18-210ENST00000497663 CA14Q9ULX7 337 aa16.65■□□□□ 0.26
TNRC18-210ENST00000497663 MAP4K5Q9Y4K4 846 aa16.65■□□□□ 0.26
TNRC18-210ENST00000497663 SF3B1O75533 1304 aaKnown RBP eCLIP16.65■□□□□ 0.26
TNRC18-210ENST00000497663 ZMYM2Q9UBW7 1377 aa16.64■□□□□ 0.26
TNRC18-210ENST00000497663 SPTBN4Q9H254 2564 aa16.64■□□□□ 0.25
TNRC18-210ENST00000497663 ABLIM1O14639 778 aa16.64■□□□□ 0.25
TNRC18-210ENST00000497663 CCL16O15467 120 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms