RNA–Protein interactions for RNA: ENST00000497539.5

SNRNP200-208, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

TSL 1 (best)

Gene SNRNP200, Length 2,666 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-208ENST00000497539 STXBP5LQ9Y2K9 1186 aa12.39□□□□□ -0.43
SNRNP200-208ENST00000497539 FAM170AA1A519 330 aa12.38□□□□□ -0.43
SNRNP200-208ENST00000497539 HNRNPDLO14979 420 aaKnown RBP12.38□□□□□ -0.43
SNRNP200-208ENST00000497539 ADCY3O60266 1144 aa12.38□□□□□ -0.43
SNRNP200-208ENST00000497539 LDHAP00338 332 aaKnown RBP12.38□□□□□ -0.43
SNRNP200-208ENST00000497539 EFNA5P52803 228 aa12.38□□□□□ -0.43
SNRNP200-208ENST00000497539 GCNT1Q02742 428 aa12.38□□□□□ -0.43
SNRNP200-208ENST00000497539 STRN3Q13033 797 aa12.38□□□□□ -0.43
SNRNP200-208ENST00000497539 IFT88Q13099 833 aa12.38□□□□□ -0.43
SNRNP200-208ENST00000497539 TSNAXIP1Q2TAA8 658 aa12.38□□□□□ -0.43
SNRNP200-208ENST00000497539 ZNF792Q3KQV3 632 aa12.38□□□□□ -0.43
SNRNP200-208ENST00000497539 CFAP221Q4G0U5 840 aa12.38□□□□□ -0.43
SNRNP200-208ENST00000497539 RDH13Q8NBN7 331 aa12.38□□□□□ -0.43
SNRNP200-208ENST00000497539 HELQQ8TDG4 1101 aa12.38□□□□□ -0.43
SNRNP200-208ENST00000497539 LMBR1Q8WVP7 490 aa12.38□□□□□ -0.43
SNRNP200-208ENST00000497539 POMGNT1Q8WZA1 660 aa12.38□□□□□ -0.43
SNRNP200-208ENST00000497539 EMID1Q96A84 441 aaPredicted RBP12.38□□□□□ -0.43
SNRNP200-208ENST00000497539 BICD1Q96G01 975 aa12.38□□□□□ -0.43
SNRNP200-208ENST00000497539 MS4A4AQ96JQ5 239 aa12.38□□□□□ -0.43
SNRNP200-208ENST00000497539 AGPAT1Q99943 283 aa12.38□□□□□ -0.43
SNRNP200-208ENST00000497539 R3HDMLQ9H3Y0 253 aa12.38□□□□□ -0.43
SNRNP200-208ENST00000497539 CD248Q9HCU0 757 aa12.38□□□□□ -0.43
SNRNP200-208ENST00000497539 ZBTB42B2RXF5 422 aa12.38□□□□□ -0.43
SNRNP200-208ENST00000497539 FOXN3O00409 490 aaPredicted RBP12.38□□□□□ -0.43
SNRNP200-208ENST00000497539 MEFVO15553 781 aaPredicted RBP12.38□□□□□ -0.43
SNRNP200-208ENST00000497539 PYGBP11216 843 aa12.38□□□□□ -0.43
SNRNP200-208ENST00000497539 NR1D1P20393 614 aa12.38□□□□□ -0.43
SNRNP200-208ENST00000497539 GCLCP48506 637 aaPredicted RBP12.38□□□□□ -0.43
SNRNP200-208ENST00000497539 FNTAP49354 379 aa12.38□□□□□ -0.43
SNRNP200-208ENST00000497539 GTF2A2P52657 109 aa12.38□□□□□ -0.43
SNRNP200-208ENST00000497539 MFAP3P55082 362 aa12.38□□□□□ -0.43
SNRNP200-208ENST00000497539 CCNA1P78396 465 aa12.38□□□□□ -0.43
SNRNP200-208ENST00000497539 SPATA21Q7Z572 469 aa12.38□□□□□ -0.43
SNRNP200-208ENST00000497539 FBXL13Q8NEE6 735 aa12.38□□□□□ -0.43
SNRNP200-208ENST00000497539 TPCN2Q8NHX9 752 aa12.38□□□□□ -0.43
SNRNP200-208ENST00000497539 ZNF473Q8WTR7 871 aaKnown RBP12.38□□□□□ -0.43
SNRNP200-208ENST00000497539 SAAL1Q96ER3 474 aa12.38□□□□□ -0.43
SNRNP200-208ENST00000497539 ISCUQ9H1K1 167 aa12.38□□□□□ -0.43
SNRNP200-208ENST00000497539 NOCTQ9UK39 431 aaKnown RBP12.38□□□□□ -0.43
SNRNP200-208ENST00000497539 A0A0B4J269 797 aa12.37□□□□□ -0.43
SNRNP200-208ENST00000497539 E7EVH7 732 aa12.37□□□□□ -0.43
SNRNP200-208ENST00000497539 MTA2O94776 668 aa12.37□□□□□ -0.43
SNRNP200-208ENST00000497539 LIG4P49917 911 aa12.37□□□□□ -0.43
SNRNP200-208ENST00000497539 SP4Q02446 784 aa12.37□□□□□ -0.43
SNRNP200-208ENST00000497539 CEP85LQ5SZL2 805 aa12.37□□□□□ -0.43
SNRNP200-208ENST00000497539 B4GALNT4Q76KP1 1039 aa12.37□□□□□ -0.43
SNRNP200-208ENST00000497539 DDX42Q86XP3 938 aaKnown RBP eCLIP12.37□□□□□ -0.43
SNRNP200-208ENST00000497539 SYCE1Q8N0S2 351 aa12.37□□□□□ -0.43
SNRNP200-208ENST00000497539 DEPTORQ8TB45 409 aa12.37□□□□□ -0.43
SNRNP200-208ENST00000497539 RFFLQ8WZ73 363 aa12.37□□□□□ -0.43
SNRNP200-208ENST00000497539 SEMA4DQ92854 862 aa12.37□□□□□ -0.43
SNRNP200-208ENST00000497539 SLC10A4Q96EP9 437 aa12.37□□□□□ -0.43
SNRNP200-208ENST00000497539 KREMEN1Q96MU8 473 aa12.37□□□□□ -0.43
SNRNP200-208ENST00000497539 CCT8L2Q96SF2 557 aa12.37□□□□□ -0.43
SNRNP200-208ENST00000497539 AZI2Q9H6S1 392 aa12.37□□□□□ -0.43
SNRNP200-208ENST00000497539 VTA1Q9NP79 307 aa12.37□□□□□ -0.43
SNRNP200-208ENST00000497539 UBE2TQ9NPD8 197 aaPredicted RBP12.37□□□□□ -0.43
SNRNP200-208ENST00000497539 UTP6Q9NYH9 597 aaKnown RBP12.37□□□□□ -0.43
SNRNP200-208ENST00000497539 GOLGA8IPA6NC78 632 aa12.37□□□□□ -0.43
SNRNP200-208ENST00000497539 GOLGA8JA6NMD2 632 aa12.37□□□□□ -0.43
SNRNP200-208ENST00000497539 CHUKO15111 745 aa12.37□□□□□ -0.43
SNRNP200-208ENST00000497539 GZMAP12544 262 aa12.37□□□□□ -0.43
SNRNP200-208ENST00000497539 TNFRSF8P28908 595 aa12.37□□□□□ -0.43
SNRNP200-208ENST00000497539 TPP2P29144 1249 aaPredicted RBP12.37□□□□□ -0.43
SNRNP200-208ENST00000497539 PEX19P40855 299 aa12.37□□□□□ -0.43
SNRNP200-208ENST00000497539 SF3A3Q12874 501 aaKnown RBP eCLIP12.37□□□□□ -0.432e-6■■■■□ 24.3
SNRNP200-208ENST00000497539 CAPSQ13938 189 aa12.37□□□□□ -0.43
SNRNP200-208ENST00000497539 HLTFQ14527 1009 aaKnown RBP eCLIP12.37□□□□□ -0.43
SNRNP200-208ENST00000497539 PUS10Q3MIT2 529 aaKnown RBP12.37□□□□□ -0.43
SNRNP200-208ENST00000497539 GLE1Q53GS7 698 aaKnown RBP12.37□□□□□ -0.43
SNRNP200-208ENST00000497539 GPRC5AQ8NFJ5 357 aa12.37□□□□□ -0.43
SNRNP200-208ENST00000497539 EZH1Q92800 747 aaPredicted RBP12.37□□□□□ -0.43
SNRNP200-208ENST00000497539 PBKQ96KB5 322 aa12.37□□□□□ -0.43
SNRNP200-208ENST00000497539 EPN3Q9H201 632 aa12.37□□□□□ -0.43
SNRNP200-208ENST00000497539 KIF9Q9HAQ2 790 aa12.37□□□□□ -0.43
SNRNP200-208ENST00000497539 GDF3Q9NR23 364 aa12.37□□□□□ -0.43
SNRNP200-208ENST00000497539 SUCLA2Q9P2R7 463 aaPredicted RBP12.37□□□□□ -0.43
SNRNP200-208ENST00000497539 PLAAQ9Y263 795 aa12.37□□□□□ -0.43
SNRNP200-208ENST00000497539 ANKRD62A6NC57 917 aa12.36□□□□□ -0.43
SNRNP200-208ENST00000497539 RAD51CO43502 376 aa12.36□□□□□ -0.43
SNRNP200-208ENST00000497539 PGK2P07205 417 aa12.36□□□□□ -0.43
SNRNP200-208ENST00000497539 IRF5Q13568 498 aa12.36□□□□□ -0.43
SNRNP200-208ENST00000497539 MXD4Q14582 209 aaPredicted RBP12.36□□□□□ -0.43
SNRNP200-208ENST00000497539 PTGISQ16647 500 aa12.36□□□□□ -0.43
SNRNP200-208ENST00000497539 LY6KQ17RY6 165 aa12.36□□□□□ -0.43
SNRNP200-208ENST00000497539 CRELD2Q6UXH1 353 aaPredicted RBP12.36□□□□□ -0.43
SNRNP200-208ENST00000497539 U2AF1L4Q8WU68 220 aaKnown RBP12.36□□□□□ -0.43
SNRNP200-208ENST00000497539 SCFD2Q8WU76 684 aa12.36□□□□□ -0.43
SNRNP200-208ENST00000497539 TMEM143Q96AN5 459 aa12.36□□□□□ -0.43
SNRNP200-208ENST00000497539 NT5C1BQ96P26 610 aa12.36□□□□□ -0.43
SNRNP200-208ENST00000497539 NFKBIZQ9BYH8 718 aa12.36□□□□□ -0.43
SNRNP200-208ENST00000497539 C2orf40Q9H1Z8 148 aa12.36□□□□□ -0.43
SNRNP200-208ENST00000497539 RAB20Q9NX57 234 aa12.36□□□□□ -0.43
SNRNP200-208ENST00000497539 STRNO43815 780 aa12.36□□□□□ -0.43
SNRNP200-208ENST00000497539 GCKP35557 465 aa12.36□□□□□ -0.43
SNRNP200-208ENST00000497539 AP3M2P53677 418 aa12.36□□□□□ -0.43
SNRNP200-208ENST00000497539 GALCP54803 685 aa12.36□□□□□ -0.43
SNRNP200-208ENST00000497539 POU5F1BQ06416 359 aa12.36□□□□□ -0.43
SNRNP200-208ENST00000497539 PAK2Q13177 524 aa12.36□□□□□ -0.43
SNRNP200-208ENST00000497539 TTLL4Q14679 1199 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms