RNA–Protein interactions for RNA: ENST00000497527.1

HPS1-213, Transcript of HPS1, biogenesis of lysosomal organelles complex 3 subunit 1, humanhuman

TSL 3

Gene HPS1, Length 536 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1-213ENST00000497527 ASTE1Q2TB18 679 aaPredicted RBP13.1□□□□□ -0.31
HPS1-213ENST00000497527 SLC10A6Q3KNW5 377 aa13.1□□□□□ -0.31
HPS1-213ENST00000497527 EFCAB13Q8IY85 973 aa13.1□□□□□ -0.31
HPS1-213ENST00000497527 TTC39CQ8N584 583 aa13.1□□□□□ -0.31
HPS1-213ENST00000497527 ACRBPQ8NEB7 543 aa13.1□□□□□ -0.31
HPS1-213ENST00000497527 HELQQ8TDG4 1101 aa13.1□□□□□ -0.31
HPS1-213ENST00000497527 C16orf45Q96MC5 204 aaPredicted RBP13.1□□□□□ -0.31
HPS1-213ENST00000497527 DEFB118Q96PH6 123 aa13.1□□□□□ -0.31
HPS1-213ENST00000497527 RNF208Q9H0X6 261 aa13.1□□□□□ -0.31
HPS1-213ENST00000497527 SNTG2Q9NY99 539 aa13.1□□□□□ -0.31
HPS1-213ENST00000497527 MYO1AQ9UBC5 1043 aa13.1□□□□□ -0.31
HPS1-213ENST00000497527 AJAP1Q9UKB5 411 aaPredicted RBP13.1□□□□□ -0.31
HPS1-213ENST00000497527 ITGA11Q9UKX5 1188 aa13.1□□□□□ -0.31
HPS1-213ENST00000497527 OGDHLQ9ULD0 1010 aa13.1□□□□□ -0.31
HPS1-213ENST00000497527 ST3GAL5Q9UNP4 418 aa13.1□□□□□ -0.31
HPS1-213ENST00000497527 TLR3O15455 904 aaKnown RBP13.09□□□□□ -0.31
HPS1-213ENST00000497527 KIF5CO60282 957 aa13.09□□□□□ -0.31
HPS1-213ENST00000497527 LRRN2O75325 713 aa13.09□□□□□ -0.31
HPS1-213ENST00000497527 VNN1O95497 513 aa13.09□□□□□ -0.31
HPS1-213ENST00000497527 STAU1O95793 577 aaKnown RBP13.09□□□□□ -0.31
HPS1-213ENST00000497527 CHRNA1P02708 482 aa13.09□□□□□ -0.31
HPS1-213ENST00000497527 PLEKP08567 350 aaPredicted RBP13.09□□□□□ -0.31
HPS1-213ENST00000497527 SKIP12755 728 aa13.09□□□□□ -0.31
HPS1-213ENST00000497527 TNNT1P13805 278 aa13.09□□□□□ -0.31
HPS1-213ENST00000497527 MAGEA1P43355 309 aa13.09□□□□□ -0.31
HPS1-213ENST00000497527 NFX1Q12986 1120 aaKnown RBP13.09□□□□□ -0.31
HPS1-213ENST00000497527 CUL2Q13617 745 aa13.09□□□□□ -0.31
HPS1-213ENST00000497527 ZNF699Q32M78 642 aa13.09□□□□□ -0.31
HPS1-213ENST00000497527 FBXO47Q5MNV8 452 aa13.09□□□□□ -0.31
HPS1-213ENST00000497527 JADE1Q6IE81 842 aa13.09□□□□□ -0.31
HPS1-213ENST00000497527 FBXO46Q6PJ61 603 aaPredicted RBP13.09□□□□□ -0.31
HPS1-213ENST00000497527 FAM71AQ8IYT1 594 aa13.09□□□□□ -0.31
HPS1-213ENST00000497527 BEST2Q8NFU1 509 aa13.09□□□□□ -0.31
HPS1-213ENST00000497527 SNX27Q96L92 541 aa13.09□□□□□ -0.31
HPS1-213ENST00000497527 KREMEN1Q96MU8 473 aa13.09□□□□□ -0.31
HPS1-213ENST00000497527 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.09□□□□□ -0.31
HPS1-213ENST00000497527 IFIH1Q9BYX4 1025 aaKnown RBP13.09□□□□□ -0.31
HPS1-213ENST00000497527 GPR88Q9GZN0 384 aa13.09□□□□□ -0.31
HPS1-213ENST00000497527 NIF3L1Q9GZT8 377 aa13.09□□□□□ -0.31
HPS1-213ENST00000497527 TRMT13Q9NUP7 481 aaKnown RBP13.09□□□□□ -0.31
HPS1-213ENST00000497527 UBQLN1Q9UMX0 589 aaKnown RBP13.09□□□□□ -0.31
HPS1-213ENST00000497527 TDRD15B5MCY1 1934 aaKnown RBP13.08□□□□□ -0.32
HPS1-213ENST00000497527 FOXN3O00409 490 aaPredicted RBP13.08□□□□□ -0.32
HPS1-213ENST00000497527 RECQL4O94761 1208 aa13.08□□□□□ -0.32
HPS1-213ENST00000497527 CD4P01730 458 aa13.08□□□□□ -0.32
HPS1-213ENST00000497527 NFICP08651 508 aa13.08□□□□□ -0.32
HPS1-213ENST00000497527 KRT19P08727 400 aa13.08□□□□□ -0.32
HPS1-213ENST00000497527 ATF7P17544 494 aaPredicted RBP13.08□□□□□ -0.32
HPS1-213ENST00000497527 TNFAIP3P21580 790 aa13.08□□□□□ -0.32
HPS1-213ENST00000497527 USP8P40818 1118 aa13.08□□□□□ -0.32
HPS1-213ENST00000497527 PDE6CP51160 858 aa13.08□□□□□ -0.32
HPS1-213ENST00000497527 ETF1P62495 437 aaKnown RBP13.08□□□□□ -0.32
HPS1-213ENST00000497527 RBP5P82980 135 aa13.08□□□□□ -0.32
HPS1-213ENST00000497527 PTK2Q05397 1052 aa13.08□□□□□ -0.32
HPS1-213ENST00000497527 TRIM71Q2Q1W2 868 aaKnown RBP13.08□□□□□ -0.32
HPS1-213ENST00000497527 ZNF667Q5HYK9 610 aa13.08□□□□□ -0.32
HPS1-213ENST00000497527 PPP1R2P3Q6NXS1 205 aa13.08□□□□□ -0.32
HPS1-213ENST00000497527 ZNF677Q86XU0 584 aa13.08□□□□□ -0.32
HPS1-213ENST00000497527 TMEM192Q8IY95 271 aa13.08□□□□□ -0.32
HPS1-213ENST00000497527 TATDN2Q93075 761 aa13.08□□□□□ -0.32
HPS1-213ENST00000497527 KIF12Q96FN5 646 aa13.08□□□□□ -0.32
HPS1-213ENST00000497527 PI4K2AQ9BTU6 479 aa13.08□□□□□ -0.32
HPS1-213ENST00000497527 TRAIPQ9BWF2 469 aa13.08□□□□□ -0.32
HPS1-213ENST00000497527 EIF2AQ9BY44 585 aaKnown RBP13.08□□□□□ -0.32
HPS1-213ENST00000497527 VRTNQ9H8Y1 702 aa13.08□□□□□ -0.32
HPS1-213ENST00000497527 ERVK-5Q9HDB9 667 aa13.08□□□□□ -0.32
HPS1-213ENST00000497527 FAM105AQ9NUU6 356 aa13.08□□□□□ -0.32
HPS1-213ENST00000497527 DPP3Q9NY33 737 aa13.08□□□□□ -0.32
HPS1-213ENST00000497527 CNTN3Q9P232 1028 aa13.08□□□□□ -0.32
HPS1-213ENST00000497527 IPPQ9Y573 584 aa13.08□□□□□ -0.32
HPS1-213ENST00000497527 PCDHA13Q9Y5I0 950 aa13.08□□□□□ -0.32
HPS1-213ENST00000497527 PJA2O43164 708 aa13.07□□□□□ -0.32
HPS1-213ENST00000497527 KRT5P13647 590 aa13.07□□□□□ -0.32
HPS1-213ENST00000497527 KCNE1P15382 129 aa13.07□□□□□ -0.32
HPS1-213ENST00000497527 CYP3A5P20815 502 aa13.07□□□□□ -0.32
HPS1-213ENST00000497527 GFPT1Q06210 699 aaPredicted RBP13.07□□□□□ -0.32
HPS1-213ENST00000497527 MYO1EQ12965 1108 aa13.07□□□□□ -0.32
HPS1-213ENST00000497527 NAB2Q15742 525 aa13.07□□□□□ -0.32
HPS1-213ENST00000497527 XKR4Q5GH76 650 aa13.07□□□□□ -0.32
HPS1-213ENST00000497527 CCDC122Q5T0U0 273 aa13.07□□□□□ -0.32
HPS1-213ENST00000497527 UBXN11Q5T124 520 aa13.07□□□□□ -0.32
HPS1-213ENST00000497527 ZNF571Q7Z3V5 609 aaPredicted RBP13.07□□□□□ -0.32
HPS1-213ENST00000497527 KIF18AQ8NI77 898 aa13.07□□□□□ -0.32
HPS1-213ENST00000497527 WNT8BQ93098 351 aa13.07□□□□□ -0.32
HPS1-213ENST00000497527 PGBD4Q96DM1 585 aa13.07□□□□□ -0.32
HPS1-213ENST00000497527 AGPAT1Q99943 283 aa13.07□□□□□ -0.32
HPS1-213ENST00000497527 DNAI2Q9GZS0 605 aa13.07□□□□□ -0.32
HPS1-213ENST00000497527 NXF3Q9H4D5 531 aaKnown RBP13.07□□□□□ -0.32
HPS1-213ENST00000497527 CYP3A43Q9HB55 503 aa13.07□□□□□ -0.32
HPS1-213ENST00000497527 LZTFL1Q9NQ48 299 aa13.07□□□□□ -0.32
HPS1-213ENST00000497527 SLC38A7Q9NVC3 462 aa13.07□□□□□ -0.32
HPS1-213ENST00000497527 PARP2Q9UGN5 583 aa13.07□□□□□ -0.32
HPS1-213ENST00000497527 ADAMTS1Q9UHI8 967 aa13.07□□□□□ -0.32
HPS1-213ENST00000497527 INTUQ9ULD6 942 aa13.07□□□□□ -0.32
HPS1-213ENST00000497527 REXO2Q9Y3B8 237 aaKnown RBP13.07□□□□□ -0.32
HPS1-213ENST00000497527 PAXBP1Q9Y5B6 917 aa13.07□□□□□ -0.32
HPS1-213ENST00000497527 PCDHB2Q9Y5E7 798 aa13.07□□□□□ -0.32
HPS1-213ENST00000497527 TANC1Q9C0D5 1861 aa13.07□□□□□ -0.32
HPS1-213ENST00000497527 MYH10P35580 1976 aa13.07□□□□□ -0.32
HPS1-213ENST00000497527 ZNF623O75123 536 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms