RNA–Protein interactions for RNA: ENST00000497139.5

VEGFA-215, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 2,746 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-215ENST00000497139 TBC1D7Q9P0N9 293 aa13.77□□□□□ -0.21
VEGFA-215ENST00000497139 CHMP2BQ9UQN3 213 aa13.77□□□□□ -0.21
VEGFA-215ENST00000497139 ADAMTS2O95450 1211 aa13.77□□□□□ -0.21
VEGFA-215ENST00000497139 PLA2G4BP0C869 781 aa13.77□□□□□ -0.21
VEGFA-215ENST00000497139 MAGEA10P43363 369 aaPredicted RBP13.77□□□□□ -0.21
VEGFA-215ENST00000497139 MARCKSL1P49006 195 aa13.77□□□□□ -0.21
VEGFA-215ENST00000497139 PSMD7P51665 324 aa13.77□□□□□ -0.21
VEGFA-215ENST00000497139 CDK16Q00536 496 aa13.77□□□□□ -0.21
VEGFA-215ENST00000497139 TFAP4Q01664 338 aa13.77□□□□□ -0.21
VEGFA-215ENST00000497139 SGO2Q562F6 1265 aa13.77□□□□□ -0.21
VEGFA-215ENST00000497139 GPBP1Q86WP2 473 aa13.77□□□□□ -0.21
VEGFA-215ENST00000497139 TMPRSS6Q8IU80 811 aa13.77□□□□□ -0.21
VEGFA-215ENST00000497139 TMEM165Q9HC07 324 aa13.77□□□□□ -0.21
VEGFA-215ENST00000497139 PLSCR1O15162 318 aa13.76□□□□□ -0.21
VEGFA-215ENST00000497139 SLC37A4O43826 429 aa13.76□□□□□ -0.21
VEGFA-215ENST00000497139 TYROBPO43914 113 aa13.76□□□□□ -0.21
VEGFA-215ENST00000497139 OPHN1O60890 802 aa13.76□□□□□ -0.21
VEGFA-215ENST00000497139 AKAP3O75969 853 aa13.76□□□□□ -0.21
VEGFA-215ENST00000497139 IL1BP01584 269 aa13.76□□□□□ -0.21
VEGFA-215ENST00000497139 ETS2P15036 469 aa13.76□□□□□ -0.21
VEGFA-215ENST00000497139 CYP11B2P19099 503 aa13.76□□□□□ -0.21
VEGFA-215ENST00000497139 CA4P22748 312 aa13.76□□□□□ -0.21
VEGFA-215ENST00000497139 KCNJ1P48048 391 aa13.76□□□□□ -0.21
VEGFA-215ENST00000497139 CD97P48960 835 aa13.76□□□□□ -0.21
VEGFA-215ENST00000497139 ADARP55265 1226 aaKnown RBP13.76□□□□□ -0.21
VEGFA-215ENST00000497139 ACTR3P61158 418 aa13.76□□□□□ -0.21
VEGFA-215ENST00000497139 PPP2R5CQ13362 524 aa13.76□□□□□ -0.21
VEGFA-215ENST00000497139 NFIL3Q16649 462 aa13.76□□□□□ -0.21
VEGFA-215ENST00000497139 TCERG1LQ5VWI1 586 aa13.76□□□□□ -0.21
VEGFA-215ENST00000497139 RINLQ6ZS11 566 aa13.76□□□□□ -0.21
VEGFA-215ENST00000497139 PDSS2Q86YH6 399 aa13.76□□□□□ -0.21
VEGFA-215ENST00000497139 DDX25Q9UHL0 483 aaKnown RBP13.76□□□□□ -0.21
VEGFA-215ENST00000497139 DNAJC12Q9UKB3 198 aa13.76□□□□□ -0.21
VEGFA-215ENST00000497139 GRID1Q9ULK0 1009 aa13.76□□□□□ -0.21
VEGFA-215ENST00000497139 MAST2Q6P0Q8 1798 aa13.76□□□□□ -0.21
VEGFA-215ENST00000497139 EXOC1LA0A1B0GW35 172 aa13.76□□□□□ -0.21
VEGFA-215ENST00000497139 CFAP69A5D8W1 941 aa13.76□□□□□ -0.21
VEGFA-215ENST00000497139 A6NJR5 290 aa13.76□□□□□ -0.21
VEGFA-215ENST00000497139 KLRF2D3W0D1 207 aa13.76□□□□□ -0.21
VEGFA-215ENST00000497139 NDC80O14777 642 aa13.76□□□□□ -0.21
VEGFA-215ENST00000497139 CHRNB2P17787 502 aa13.76□□□□□ -0.21
VEGFA-215ENST00000497139 OR6Y1Q8NGX8 325 aa13.76□□□□□ -0.21
VEGFA-215ENST00000497139 ZNF526Q8TF50 670 aaPredicted RBP13.76□□□□□ -0.21
VEGFA-215ENST00000497139 AGBL1Q96MI9 1066 aa13.76□□□□□ -0.21
VEGFA-215ENST00000497139 AGPAT1Q99943 283 aa13.76□□□□□ -0.21
VEGFA-215ENST00000497139 KIAA1586Q9HCI6 787 aa13.76□□□□□ -0.21
VEGFA-215ENST00000497139 HEY2Q9UBP5 337 aa13.76□□□□□ -0.21
VEGFA-215ENST00000497139 TUBGCP4Q9UGJ1 667 aa13.76□□□□□ -0.21
VEGFA-215ENST00000497139 ZNF148Q9UQR1 794 aa13.76□□□□□ -0.21
VEGFA-215ENST00000497139 TCRBV7S2A1N4TA0A589 114 aa13.75□□□□□ -0.21
VEGFA-215ENST00000497139 POTECB2RU33 542 aa13.75□□□□□ -0.21
VEGFA-215ENST00000497139 SPAG7O75391 227 aa13.75□□□□□ -0.21
VEGFA-215ENST00000497139 E2F6O75461 281 aa13.75□□□□□ -0.21
VEGFA-215ENST00000497139 CSDE1O75534 798 aaKnown RBP13.75□□□□□ -0.21
VEGFA-215ENST00000497139 NR3C1P04150 777 aa13.75□□□□□ -0.21
VEGFA-215ENST00000497139 HNRNPCP07910 306 aaKnown RBP eCLIP13.75□□□□□ -0.21
VEGFA-215ENST00000497139 UQCRBP14927 111 aa13.75□□□□□ -0.21
VEGFA-215ENST00000497139 MPP3Q13368 585 aa13.75□□□□□ -0.21
VEGFA-215ENST00000497139 DCTN2Q13561 401 aaKnown RBP13.75□□□□□ -0.21
VEGFA-215ENST00000497139 ECM1Q16610 540 aa13.75□□□□□ -0.21
VEGFA-215ENST00000497139 DNAL1Q4LDG9 190 aa13.75□□□□□ -0.21
VEGFA-215ENST00000497139 GJB7Q6PEY0 223 aa13.75□□□□□ -0.21
VEGFA-215ENST00000497139 ANKS1BQ7Z6G8 1248 aa13.75□□□□□ -0.21
VEGFA-215ENST00000497139 NOP9Q86U38 636 aaKnown RBP13.75□□□□□ -0.21
VEGFA-215ENST00000497139 PLK2Q9NYY3 685 aa13.75□□□□□ -0.21
VEGFA-215ENST00000497139 KANSL3Q9P2N6 904 aa13.75□□□□□ -0.21
VEGFA-215ENST00000497139 SLC24A2Q9UI40 661 aa13.75□□□□□ -0.21
VEGFA-215ENST00000497139 SCN7AQ01118 1682 aa13.75□□□□□ -0.21
VEGFA-215ENST00000497139 LGR5O75473 907 aa13.75□□□□□ -0.21
VEGFA-215ENST00000497139 STARD3NLO95772 234 aa13.75□□□□□ -0.21
VEGFA-215ENST00000497139 RPA3P35244 121 aaPredicted RBP13.75□□□□□ -0.21
VEGFA-215ENST00000497139 ARFIP2P53365 341 aa13.75□□□□□ -0.21
VEGFA-215ENST00000497139 GPSM2P81274 684 aa13.75□□□□□ -0.21
VEGFA-215ENST00000497139 CENPCQ03188 943 aa13.75□□□□□ -0.21
VEGFA-215ENST00000497139 RASA3Q14644 834 aa13.75□□□□□ -0.21
VEGFA-215ENST00000497139 PLEKHG4Q58EX7 1191 aa13.75□□□□□ -0.21
VEGFA-215ENST00000497139 LRRC6Q86X45 466 aa13.75□□□□□ -0.21
VEGFA-215ENST00000497139 MKNK1Q9BUB5 465 aa13.75□□□□□ -0.21
VEGFA-215ENST00000497139 GPR88Q9GZN0 384 aa13.75□□□□□ -0.21
VEGFA-215ENST00000497139 VPS11Q9H270 941 aa13.75□□□□□ -0.21
VEGFA-215ENST00000497139 POLIQ9UNA4 740 aa13.75□□□□□ -0.21
VEGFA-215ENST00000497139 ZNF330Q9Y3S2 320 aaPredicted RBP13.75□□□□□ -0.21
VEGFA-215ENST00000497139 NUP98P52948 1817 aa13.74□□□□□ -0.21
VEGFA-215ENST00000497139 TM9SF1O15321 606 aa13.74□□□□□ -0.21
VEGFA-215ENST00000497139 BUD23O43709 281 aaKnown RBP13.74□□□□□ -0.21
VEGFA-215ENST00000497139 TM7SF2O76062 418 aa13.74□□□□□ -0.21
VEGFA-215ENST00000497139 EIF4BP23588 611 aaKnown RBP13.74□□□□□ -0.21
VEGFA-215ENST00000497139 RPL5P46777 297 aaKnown RBP13.74□□□□□ -0.21
VEGFA-215ENST00000497139 ADCY1Q08828 1119 aa13.74□□□□□ -0.21
VEGFA-215ENST00000497139 KYAT3Q6YP21 454 aaKnown RBP13.74□□□□□ -0.21
VEGFA-215ENST00000497139 MAP7D3Q8IWC1 876 aa13.74□□□□□ -0.21
VEGFA-215ENST00000497139 CCDC89Q8N998 374 aa13.74□□□□□ -0.21
VEGFA-215ENST00000497139 SETDB2Q96T68 719 aa13.74□□□□□ -0.21
VEGFA-215ENST00000497139 BTBD7Q9P203 1132 aa13.74□□□□□ -0.21
VEGFA-215ENST00000497139 BIN2Q9UBW5 565 aaPredicted RBP13.74□□□□□ -0.21
VEGFA-215ENST00000497139 FETUBQ9UGM5 382 aa13.74□□□□□ -0.21
VEGFA-215ENST00000497139 ERVV-1B6SEH8 477 aa13.74□□□□□ -0.21
VEGFA-215ENST00000497139 TDP2O95551 362 aa13.74□□□□□ -0.21
VEGFA-215ENST00000497139 OATP04181 439 aa13.74□□□□□ -0.21
VEGFA-215ENST00000497139 KRT18P05783 430 aaKnown RBP13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms