RNA–Protein interactions for RNA: ENST00000496723.1

CD46-218, Transcript of CD46 molecule, humanhuman

TSL 5

Gene CD46, Length 661 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-218ENST00000496723 ERCC6LQ2NKX8 1250 aa5.01□□□□□ -1.61
CD46-218ENST00000496723 ZBTB46Q86UZ6 589 aa5.01□□□□□ -1.61
CD46-218ENST00000496723 ZGPATQ8N5A5 531 aaKnown RBP5.01□□□□□ -1.61
CD46-218ENST00000496723 NELL1Q92832 810 aa5.01□□□□□ -1.61
CD46-218ENST00000496723 RAB24Q969Q5 203 aa5.01□□□□□ -1.61
CD46-218ENST00000496723 HDAC10Q969S8 669 aa5.01□□□□□ -1.61
CD46-218ENST00000496723 COA7Q96BR5 231 aa5.01□□□□□ -1.61
CD46-218ENST00000496723 PHACTR3Q96KR7 559 aa5.01□□□□□ -1.61
CD46-218ENST00000496723 MYOCQ99972 504 aa5.01□□□□□ -1.61
CD46-218ENST00000496723 WDR11Q9BZH6 1224 aa5.01□□□□□ -1.61
CD46-218ENST00000496723 AKIP1Q9NQ31 210 aa5.01□□□□□ -1.61
CD46-218ENST00000496723 SYBUQ9NX95 663 aa5.01□□□□□ -1.61
CD46-218ENST00000496723 TRPM5Q9NZQ8 1165 aa5.01□□□□□ -1.61
CD46-218ENST00000496723 SERPINB13Q9UIV8 391 aa5.01□□□□□ -1.61
CD46-218ENST00000496723 RUVBL1Q9Y265 456 aaKnown RBP5.01□□□□□ -1.61
CD46-218ENST00000496723 IPPQ9Y573 584 aa5.01□□□□□ -1.61
CD46-218ENST00000496723 CCDC154A6NI56 674 aa5□□□□□ -1.61
CD46-218ENST00000496723 TEX33O43247 280 aa5□□□□□ -1.61
CD46-218ENST00000496723 LPXNO60711 386 aa5□□□□□ -1.61
CD46-218ENST00000496723 EDNRBP24530 442 aa5□□□□□ -1.61
CD46-218ENST00000496723 RECQLP46063 649 aaPredicted RBP5□□□□□ -1.61
CD46-218ENST00000496723 CLK3P49761 638 aaKnown RBP5□□□□□ -1.61
CD46-218ENST00000496723 CHN2P52757 468 aa5□□□□□ -1.61
CD46-218ENST00000496723 ADKP55263 362 aaKnown RBP5□□□□□ -1.61
CD46-218ENST00000496723 RNASE9P60153 205 aaKnown RBP5□□□□□ -1.61
CD46-218ENST00000496723 FAM189BP81408 668 aa5□□□□□ -1.61
CD46-218ENST00000496723 ATP8B2P98198 1209 aa5□□□□□ -1.61
CD46-218ENST00000496723 MTM1Q13496 603 aa5□□□□□ -1.61
CD46-218ENST00000496723 UAP1L1Q3KQV9 507 aa5□□□□□ -1.61
CD46-218ENST00000496723 OTUD7BQ6GQQ9 843 aa5□□□□□ -1.61
CD46-218ENST00000496723 PLXDC1Q8IUK5 500 aa5□□□□□ -1.61
CD46-218ENST00000496723 TDP1Q9NUW8 608 aa5□□□□□ -1.61
CD46-218ENST00000496723 TYW1Q9NV66 732 aaKnown RBP5□□□□□ -1.61
CD46-218ENST00000496723 DDX56Q9NY93 547 aaKnown RBP5□□□□□ -1.61
CD46-218ENST00000496723 DKK2Q9UBU2 259 aa5□□□□□ -1.61
CD46-218ENST00000496723 SLC23A1Q9UHI7 598 aa5□□□□□ -1.61
CD46-218ENST00000496723 LUC7L2Q9Y383 392 aaKnown RBP5□□□□□ -1.61
CD46-218ENST00000496723 CHST2Q9Y4C5 530 aa5□□□□□ -1.61
CD46-218ENST00000496723 INSL6Q9Y581 213 aa5□□□□□ -1.61
CD46-218ENST00000496723 DRGXA6NNA5 263 aa4.99□□□□□ -1.61
CD46-218ENST00000496723 INO80B-WBP1J3KQ70 363 aa4.99□□□□□ -1.61
CD46-218ENST00000496723 ZRANB2O95218 330 aaKnown RBP eCLIP4.99□□□□□ -1.617e-31■■■■□ 20.7
CD46-218ENST00000496723 POMCP01189 267 aa4.99□□□□□ -1.61
CD46-218ENST00000496723 HLA-DOAP06340 250 aa4.99□□□□□ -1.61
CD46-218ENST00000496723 PDGFRBP09619 1106 aa4.99□□□□□ -1.61
CD46-218ENST00000496723 HKR1P10072 659 aa4.99□□□□□ -1.61
CD46-218ENST00000496723 CDK4P11802 303 aa4.99□□□□□ -1.61
CD46-218ENST00000496723 NEK2P51955 445 aa4.99□□□□□ -1.61
CD46-218ENST00000496723 CDC42EP1Q00587 391 aa4.99□□□□□ -1.61
CD46-218ENST00000496723 IL10RAQ13651 578 aa4.99□□□□□ -1.61
CD46-218ENST00000496723 BEAN1Q3B7T3 259 aa4.99□□□□□ -1.61
CD46-218ENST00000496723 C3orf36Q3SXR2 165 aa4.99□□□□□ -1.61
CD46-218ENST00000496723 ZNF529Q6P280 563 aa4.99□□□□□ -1.61
CD46-218ENST00000496723 SEM1Q6ZVN7 128 aa4.99□□□□□ -1.61
CD46-218ENST00000496723 MED25Q71SY5 747 aa4.99□□□□□ -1.61
CD46-218ENST00000496723 UBE3BQ7Z3V4 1068 aa4.99□□□□□ -1.61
CD46-218ENST00000496723 RD3Q7Z3Z2 195 aa4.99□□□□□ -1.61
CD46-218ENST00000496723 RSPH3Q86UC2 560 aa4.99□□□□□ -1.61
CD46-218ENST00000496723 DRC7Q8IY82 874 aa4.99□□□□□ -1.61
CD46-218ENST00000496723 MIER2Q8N344 545 aa4.99□□□□□ -1.61
CD46-218ENST00000496723 STAG1Q8WVM7 1258 aa4.99□□□□□ -1.61
CD46-218ENST00000496723 LINC00476Q8WZB0 136 aa4.99□□□□□ -1.61
CD46-218ENST00000496723 CHMP4CQ96CF2 233 aa4.99□□□□□ -1.61
CD46-218ENST00000496723 TMX3Q96JJ7 454 aa4.99□□□□□ -1.61
CD46-218ENST00000496723 INO80BQ9C086 356 aaPredicted RBP4.99□□□□□ -1.61
CD46-218ENST00000496723 ANKFY1Q9P2R3 1169 aa4.99□□□□□ -1.61
CD46-218ENST00000496723 USP15Q9Y4E8 981 aaPredicted RBP4.99□□□□□ -1.61
CD46-218ENST00000496723 EPN1Q9Y6I3 576 aaPredicted RBP4.99□□□□□ -1.61
CD46-218ENST00000496723 ZNF185O15231 689 aa4.98□□□□□ -1.61
CD46-218ENST00000496723 NCR1O76036 304 aa4.98□□□□□ -1.61
CD46-218ENST00000496723 NDUFA10O95299 355 aa4.98□□□□□ -1.61
CD46-218ENST00000496723 ZNF37AP17032 561 aaPredicted RBP4.98□□□□□ -1.61
CD46-218ENST00000496723 ZSCAN20P17040 1043 aaPredicted RBP4.98□□□□□ -1.61
CD46-218ENST00000496723 CREMQ03060 361 aa4.98□□□□□ -1.61
CD46-218ENST00000496723 TARDBPQ13148 414 aaKnown RBP eCLIP4.98□□□□□ -1.61
CD46-218ENST00000496723 UBXN2BQ14CS0 331 aa4.98□□□□□ -1.61
CD46-218ENST00000496723 PRR16Q569H4 304 aa4.98□□□□□ -1.61
CD46-218ENST00000496723 FAM102AQ5T9C2 384 aaPredicted RBP4.98□□□□□ -1.61
CD46-218ENST00000496723 KAT5Q92993 513 aa4.98□□□□□ -1.61
CD46-218ENST00000496723 CAVIN3Q969G5 261 aa4.98□□□□□ -1.61
CD46-218ENST00000496723 AASDHPPTQ9NRN7 309 aa4.98□□□□□ -1.61
CD46-218ENST00000496723 TCRBV7S2A1N4TA0A589 114 aa4.97□□□□□ -1.61
CD46-218ENST00000496723 PIPSLA2A3N6 862 aa4.97□□□□□ -1.61
CD46-218ENST00000496723 KIAA0391O15091 583 aaKnown RBP4.97□□□□□ -1.61
CD46-218ENST00000496723 SGTAO43765 313 aa4.97□□□□□ -1.61
CD46-218ENST00000496723 ALDH1L1O75891 902 aa4.97□□□□□ -1.61
CD46-218ENST00000496723 TYRP1P17643 537 aa4.97□□□□□ -1.61
CD46-218ENST00000496723 SEC24CP53992 1094 aa4.97□□□□□ -1.61
CD46-218ENST00000496723 ELLP55199 621 aaPredicted RBP4.97□□□□□ -1.61
CD46-218ENST00000496723 KRTAP10-11P60412 298 aa4.97□□□□□ -1.61
CD46-218ENST00000496723 CTXN1P60606 82 aa4.97□□□□□ -1.61
CD46-218ENST00000496723 GUCY1B3Q02153 619 aa4.97□□□□□ -1.61
CD46-218ENST00000496723 ATP2B3Q16720 1220 aa4.97□□□□□ -1.61
CD46-218ENST00000496723 PDCD4Q53EL6 469 aaKnown RBP4.97□□□□□ -1.61
CD46-218ENST00000496723 ABHD17BQ5VST6 288 aa4.97□□□□□ -1.61
CD46-218ENST00000496723 METRNLQ641Q3 311 aa4.97□□□□□ -1.61
CD46-218ENST00000496723 PPP4R3AQ6IN85 833 aa4.97□□□□□ -1.61
CD46-218ENST00000496723 CMTR2Q8IYT2 770 aaKnown RBP4.97□□□□□ -1.61
CD46-218ENST00000496723 CPA6Q8N4T0 437 aa4.97□□□□□ -1.61
CD46-218ENST00000496723 SLC9A6Q92581 669 aa4.97□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms