RNA–Protein interactions for RNA: ENST00000496677.5

CLDN12-213, Transcript of claudin 12, humanhuman

TSL 1 (best)

Gene CLDN12, Length 1,098 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN12-213ENST00000496677 HOXA9P31269 272 aa13.51□□□□□ -0.25
CLDN12-213ENST00000496677 OR1D2P34982 312 aa13.51□□□□□ -0.25
CLDN12-213ENST00000496677 MTMR3Q13615 1198 aa13.51□□□□□ -0.25
CLDN12-213ENST00000496677 ZBTB41Q5SVQ8 909 aa13.51□□□□□ -0.25
CLDN12-213ENST00000496677 IER5LQ5T953 404 aa13.51□□□□□ -0.25
CLDN12-213ENST00000496677 SLC8B1Q6J4K2 584 aa13.51□□□□□ -0.25
CLDN12-213ENST00000496677 TMEM130Q8N3G9 435 aa13.51□□□□□ -0.25
CLDN12-213ENST00000496677 ACSF2Q96CM8 615 aaPredicted RBP13.51□□□□□ -0.25
CLDN12-213ENST00000496677 DNAJC19Q96DA6 116 aa13.51□□□□□ -0.25
CLDN12-213ENST00000496677 ZSCAN16Q9H4T2 348 aaPredicted RBP13.51□□□□□ -0.25
CLDN12-213ENST00000496677 KCNK12Q9HB15 430 aa13.51□□□□□ -0.25
CLDN12-213ENST00000496677 STK17AQ9UEE5 414 aa13.51□□□□□ -0.25
CLDN12-213ENST00000496677 DOCK8Q8NF50 2099 aa13.51□□□□□ -0.25
CLDN12-213ENST00000496677 WDFY4Q6ZS81 3184 aa13.51□□□□□ -0.25
CLDN12-213ENST00000496677 A0A087X0B3 334 aa13.5□□□□□ -0.25
CLDN12-213ENST00000496677 SPDYE4A6NLX3 237 aa13.5□□□□□ -0.25
CLDN12-213ENST00000496677 ANKRD63C9JTQ0 380 aa13.5□□□□□ -0.25
CLDN12-213ENST00000496677 OGTO15294 1046 aa13.5□□□□□ -0.25
CLDN12-213ENST00000496677 PPP1R37O75864 691 aa13.5□□□□□ -0.25
CLDN12-213ENST00000496677 PDGFBP01127 241 aaPredicted RBP13.5□□□□□ -0.25
CLDN12-213ENST00000496677 POU2F2P09086 479 aa13.5□□□□□ -0.25
CLDN12-213ENST00000496677 HNRNPA1P09651 372 aaKnown RBP eCLIP13.5□□□□□ -0.25
CLDN12-213ENST00000496677 CXCL8P10145 99 aa13.5□□□□□ -0.25
CLDN12-213ENST00000496677 LRPAP1P30533 357 aa13.5□□□□□ -0.25
CLDN12-213ENST00000496677 TNFSF9P41273 254 aa13.5□□□□□ -0.25
CLDN12-213ENST00000496677 NASPP49321 788 aaPredicted RBP13.5□□□□□ -0.25
CLDN12-213ENST00000496677 CEBPZQ03701 1054 aaKnown RBP13.5□□□□□ -0.25
CLDN12-213ENST00000496677 ENOX2Q16206 610 aaKnown RBP13.5□□□□□ -0.25
CLDN12-213ENST00000496677 ZC2HC1CQ53FD0 456 aaPredicted RBP13.5□□□□□ -0.25
CLDN12-213ENST00000496677 ANKS3Q6ZW76 656 aa13.5□□□□□ -0.25
CLDN12-213ENST00000496677 ZNF720Q7Z2F6 126 aa13.5□□□□□ -0.25
CLDN12-213ENST00000496677 MAP4K3Q8IVH8 894 aa13.5□□□□□ -0.25
CLDN12-213ENST00000496677 SUSD3Q96L08 255 aa13.5□□□□□ -0.25
CLDN12-213ENST00000496677 TUBGCP4Q9UGJ1 667 aa13.5□□□□□ -0.25
CLDN12-213ENST00000496677 CDY1Q9Y6F8 540 aa13.5□□□□□ -0.25
CLDN12-213ENST00000496677 STYXL1Q9Y6J8 313 aa13.5□□□□□ -0.25
CLDN12-213ENST00000496677 PDCD11Q14690 1871 aaKnown RBP13.5□□□□□ -0.25
CLDN12-213ENST00000496677 MYMKA6NI61 221 aa13.49□□□□□ -0.25
CLDN12-213ENST00000496677 LACTBL1A8MY62 500 aa13.49□□□□□ -0.25
CLDN12-213ENST00000496677 K7ENM7 598 aa13.49□□□□□ -0.25
CLDN12-213ENST00000496677 SYN3O14994 580 aa13.49□□□□□ -0.25
CLDN12-213ENST00000496677 ABLIM3O94929 683 aa13.49□□□□□ -0.25
CLDN12-213ENST00000496677 C8AP07357 584 aa13.49□□□□□ -0.25
CLDN12-213ENST00000496677 LIG4P49917 911 aa13.49□□□□□ -0.25
CLDN12-213ENST00000496677 SPAG1Q07617 926 aa13.49□□□□□ -0.25
CLDN12-213ENST00000496677 TDGQ13569 410 aa13.49□□□□□ -0.25
CLDN12-213ENST00000496677 KYAT1Q16773 422 aa13.49□□□□□ -0.25
CLDN12-213ENST00000496677 UVSSAQ2YD98 709 aa13.49□□□□□ -0.25
CLDN12-213ENST00000496677 VARS2Q5ST30 1063 aaKnown RBP13.49□□□□□ -0.25
CLDN12-213ENST00000496677 AXDND1Q5T1B0 1012 aaPredicted RBP13.49□□□□□ -0.25
CLDN12-213ENST00000496677 RRAGBQ5VZM2 374 aa13.49□□□□□ -0.25
CLDN12-213ENST00000496677 RTL10Q7L3V2 364 aa13.49□□□□□ -0.25
CLDN12-213ENST00000496677 KRI1Q8N9T8 703 aaKnown RBP13.49□□□□□ -0.25
CLDN12-213ENST00000496677 DDX12PQ92771 950 aa13.49□□□□□ -0.25
CLDN12-213ENST00000496677 STAMQ92783 540 aa13.49□□□□□ -0.25
CLDN12-213ENST00000496677 IGSF9Q9P2J2 1179 aa13.49□□□□□ -0.25
CLDN12-213ENST00000496677 CCDC39Q9UFE4 941 aa13.49□□□□□ -0.25
CLDN12-213ENST00000496677 CPSF3Q9UKF6 684 aaKnown RBP13.49□□□□□ -0.25
CLDN12-213ENST00000496677 NOTCH4Q99466 2003 aa13.48□□□□□ -0.25
CLDN12-213ENST00000496677 TISP43B9A030 160 aa13.48□□□□□ -0.25
CLDN12-213ENST00000496677 ANHXE9PGG2 379 aa13.48□□□□□ -0.25
CLDN12-213ENST00000496677 HNRNPDLO14979 420 aaKnown RBP13.48□□□□□ -0.25
CLDN12-213ENST00000496677 TBCAO75347 108 aaKnown RBP13.48□□□□□ -0.25
CLDN12-213ENST00000496677 KRT18P05783 430 aaKnown RBP13.48□□□□□ -0.25
CLDN12-213ENST00000496677 LAMP2P13473 410 aa13.48□□□□□ -0.25
CLDN12-213ENST00000496677 CYP3A5P20815 502 aa13.48□□□□□ -0.25
CLDN12-213ENST00000496677 AVPR2P30518 371 aa13.48□□□□□ -0.25
CLDN12-213ENST00000496677 ABCD1P33897 745 aa13.48□□□□□ -0.25
CLDN12-213ENST00000496677 AARSP49588 968 aaKnown RBP eCLIP13.48□□□□□ -0.25
CLDN12-213ENST00000496677 VCPP55072 806 aaKnown RBP13.48□□□□□ -0.25
CLDN12-213ENST00000496677 NTHL1P78549 312 aa13.48□□□□□ -0.25
CLDN12-213ENST00000496677 ROR1Q01973 937 aa13.48□□□□□ -0.25
CLDN12-213ENST00000496677 PPM1LQ5SGD2 360 aa13.48□□□□□ -0.25
CLDN12-213ENST00000496677 DYMQ7RTS9 669 aa13.48□□□□□ -0.25
CLDN12-213ENST00000496677 GRASPQ7Z6J2 395 aaPredicted RBP13.48□□□□□ -0.25
CLDN12-213ENST00000496677 SFR1Q86XK3 245 aa13.48□□□□□ -0.25
CLDN12-213ENST00000496677 LINC00301Q8NCQ3 95 aa13.48□□□□□ -0.25
CLDN12-213ENST00000496677 PRSS33Q8NF86 280 aa13.48□□□□□ -0.25
CLDN12-213ENST00000496677 RASSF8Q8NHQ8 419 aa13.48□□□□□ -0.25
CLDN12-213ENST00000496677 ZNF461Q8TAF7 563 aa13.48□□□□□ -0.25
CLDN12-213ENST00000496677 RSAD2Q8WXG1 361 aa13.48□□□□□ -0.25
CLDN12-213ENST00000496677 BICD1Q96G01 975 aa13.48□□□□□ -0.25
CLDN12-213ENST00000496677 TSPAN18Q96SJ8 248 aa13.48□□□□□ -0.25
CLDN12-213ENST00000496677 IKZF4Q9H2S9 585 aa13.48□□□□□ -0.25
CLDN12-213ENST00000496677 PIDD1Q9HB75 910 aa13.48□□□□□ -0.25
CLDN12-213ENST00000496677 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.48□□□□□ -0.25
CLDN12-213ENST00000496677 KMT2EQ8IZD2 1858 aa13.48□□□□□ -0.25
CLDN12-213ENST00000496677 ARHGEF37A1IGU5 675 aa13.47□□□□□ -0.25
CLDN12-213ENST00000496677 FRMD3A2A2Y4 597 aa13.47□□□□□ -0.25
CLDN12-213ENST00000496677 WDR27A2RRH5 827 aa13.47□□□□□ -0.25
CLDN12-213ENST00000496677 M0QZQ0 153 aa13.47□□□□□ -0.25
CLDN12-213ENST00000496677 CCL16O15467 120 aa13.47□□□□□ -0.25
CLDN12-213ENST00000496677 MATR3P43243 847 aaKnown RBP eCLIP13.47□□□□□ -0.25
CLDN12-213ENST00000496677 LIN9Q5TKA1 542 aa13.47□□□□□ -0.25
CLDN12-213ENST00000496677 SPATA1Q5VX52 437 aa13.47□□□□□ -0.25
CLDN12-213ENST00000496677 CRELD2Q6UXH1 353 aaPredicted RBP13.47□□□□□ -0.25
CLDN12-213ENST00000496677 CCDC73Q6ZRK6 1079 aa13.47□□□□□ -0.25
CLDN12-213ENST00000496677 SV2BQ7L1I2 683 aa13.47□□□□□ -0.25
CLDN12-213ENST00000496677 SUGP1Q8IWZ8 645 aaKnown RBP13.47□□□□□ -0.25
CLDN12-213ENST00000496677 SLC44A3Q8N4M1 653 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms