RNA–Protein interactions for RNA: ENST00000496205.1

CLK1-214, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 480 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-214ENST00000496205 IL17RAQ96F46 866 aa4.87□□□□□ -1.63
CLK1-214ENST00000496205 GTPBP4Q9BZE4 634 aaKnown RBP4.87□□□□□ -1.63
CLK1-214ENST00000496205 DMRT3Q9NQL9 472 aa4.87□□□□□ -1.63
CLK1-214ENST00000496205 OBP2AQ9NY56 170 aa4.87□□□□□ -1.63
CLK1-214ENST00000496205 HDAC5Q9UQL6 1122 aa4.87□□□□□ -1.63
CLK1-214ENST00000496205 NUMBLQ9Y6R0 609 aa4.87□□□□□ -1.63
CLK1-214ENST00000496205 MYPNQ86TC9 1320 aa4.87□□□□□ -1.63
CLK1-214ENST00000496205 ARHGEF17Q96PE2 2063 aaPredicted RBP4.87□□□□□ -1.63
CLK1-214ENST00000496205 KIF3BO15066 747 aa4.86□□□□□ -1.63
CLK1-214ENST00000496205 LY86O95711 162 aa4.86□□□□□ -1.63
CLK1-214ENST00000496205 EDNRBP24530 442 aa4.86□□□□□ -1.63
CLK1-214ENST00000496205 GZMKP49863 264 aa4.86□□□□□ -1.63
CLK1-214ENST00000496205 ELLP55199 621 aaPredicted RBP4.86□□□□□ -1.63
CLK1-214ENST00000496205 FOXF2Q12947 444 aa4.86□□□□□ -1.63
CLK1-214ENST00000496205 GRM3Q14832 879 aa4.86□□□□□ -1.63
CLK1-214ENST00000496205 ERCC6LQ2NKX8 1250 aa4.86□□□□□ -1.63
CLK1-214ENST00000496205 CYB5RLQ6IPT4 315 aa4.86□□□□□ -1.63
CLK1-214ENST00000496205 TIGD7Q6NT04 549 aaPredicted RBP4.86□□□□□ -1.63
CLK1-214ENST00000496205 UNC5BQ8IZJ1 945 aa4.86□□□□□ -1.63
CLK1-214ENST00000496205 MSL3Q8N5Y2 521 aaKnown RBP4.86□□□□□ -1.63
CLK1-214ENST00000496205 SPATA5L1Q9BVQ7 753 aa4.86□□□□□ -1.63
CLK1-214ENST00000496205 IFT122Q9HBG6 1241 aa4.86□□□□□ -1.63
CLK1-214ENST00000496205 GEMIN8Q9NWZ8 242 aaKnown RBP4.86□□□□□ -1.63
CLK1-214ENST00000496205 USP18Q9UMW8 372 aa4.86□□□□□ -1.63
CLK1-214ENST00000496205 MAP3K2Q9Y2U5 619 aa4.86□□□□□ -1.63
CLK1-214ENST00000496205 MRFAP1Q9Y605 127 aa4.86□□□□□ -1.63
CLK1-214ENST00000496205 CDY2AQ9Y6F7 541 aa4.86□□□□□ -1.63
CLK1-214ENST00000496205 MYADML2A6NDP7 307 aa4.85□□□□□ -1.63
CLK1-214ENST00000496205 SPDEFO95238 335 aa4.85□□□□□ -1.63
CLK1-214ENST00000496205 MATN4O95460 622 aa4.85□□□□□ -1.63
CLK1-214ENST00000496205 ESRRBO95718 433 aa4.85□□□□□ -1.63
CLK1-214ENST00000496205 EGR2P11161 476 aaPredicted RBP4.85□□□□□ -1.63
CLK1-214ENST00000496205 CYP2C19P33261 490 aa4.85□□□□□ -1.63
CLK1-214ENST00000496205 ADKP55263 362 aaKnown RBP4.85□□□□□ -1.63
CLK1-214ENST00000496205 WNT3AP56704 352 aa4.85□□□□□ -1.63
CLK1-214ENST00000496205 KIF23Q02241 960 aaPredicted RBP4.85□□□□□ -1.63
CLK1-214ENST00000496205 ADRM1Q16186 407 aa4.85□□□□□ -1.63
CLK1-214ENST00000496205 ANKS6Q68DC2 871 aa4.85□□□□□ -1.63
CLK1-214ENST00000496205 PLXDC1Q8IUK5 500 aa4.85□□□□□ -1.63
CLK1-214ENST00000496205 OR2I1PQ8NGU4 316 aa4.85□□□□□ -1.63
CLK1-214ENST00000496205 NELL1Q92832 810 aa4.85□□□□□ -1.63
CLK1-214ENST00000496205 SLC39A13Q96H72 371 aa4.85□□□□□ -1.63
CLK1-214ENST00000496205 RAX2Q96IS3 184 aa4.85□□□□□ -1.63
CLK1-214ENST00000496205 HIST1H2AHQ96KK5 128 aa4.85□□□□□ -1.63
CLK1-214ENST00000496205 AIFM3Q96NN9 605 aa4.85□□□□□ -1.63
CLK1-214ENST00000496205 TAAR9Q96RI9 348 aa4.85□□□□□ -1.63
CLK1-214ENST00000496205 NUP88Q99567 741 aaPredicted RBP4.85□□□□□ -1.63
CLK1-214ENST00000496205 HIST1H2AJQ99878 128 aa4.85□□□□□ -1.63
CLK1-214ENST00000496205 WNT8AQ9H1J5 351 aa4.85□□□□□ -1.63
CLK1-214ENST00000496205 ARNT2Q9HBZ2 717 aa4.85□□□□□ -1.63
CLK1-214ENST00000496205 SPON1Q9HCB6 807 aa4.85□□□□□ -1.63
CLK1-214ENST00000496205 SCOCQ9UIL1 159 aa4.85□□□□□ -1.63
CLK1-214ENST00000496205 LIMCH1Q9UPQ0 1083 aa4.85□□□□□ -1.63
CLK1-214ENST00000496205 TTBK1Q5TCY1 1321 aaPredicted RBP4.85□□□□□ -1.63
CLK1-214ENST00000496205 ST20-MTHFSA0A0A6YYL1 179 aa4.84□□□□□ -1.63
CLK1-214ENST00000496205 TMEM127O75204 238 aa4.84□□□□□ -1.63
CLK1-214ENST00000496205 SEC24DO94855 1032 aaPredicted RBP4.84□□□□□ -1.63
CLK1-214ENST00000496205 C1RP00736 705 aa4.84□□□□□ -1.63
CLK1-214ENST00000496205 IGLV2-14P01704 120 aa4.84□□□□□ -1.63
CLK1-214ENST00000496205 DDX6P26196 483 aaKnown RBP eCLIP4.84□□□□□ -1.63
CLK1-214ENST00000496205 PPP3CAQ08209 521 aa4.84□□□□□ -1.63
CLK1-214ENST00000496205 GFOD2Q3B7J2 385 aa4.84□□□□□ -1.63
CLK1-214ENST00000496205 C3orf36Q3SXR2 165 aa4.84□□□□□ -1.63
CLK1-214ENST00000496205 IFIT1BQ5T764 474 aaKnown RBP4.84□□□□□ -1.63
CLK1-214ENST00000496205 ABHD17BQ5VST6 288 aa4.84□□□□□ -1.63
CLK1-214ENST00000496205 DGKHQ86XP1 1220 aa4.84□□□□□ -1.63
CLK1-214ENST00000496205 PPP1R35Q8TAP8 253 aa4.84□□□□□ -1.63
CLK1-214ENST00000496205 GAB3Q8WWW8 586 aa4.84□□□□□ -1.63
CLK1-214ENST00000496205 COA7Q96BR5 231 aa4.84□□□□□ -1.63
CLK1-214ENST00000496205 RNF7Q9UBF6 113 aa4.84□□□□□ -1.63
CLK1-214ENST00000496205 KCNG1Q9UIX4 513 aa4.84□□□□□ -1.63
CLK1-214ENST00000496205 DNM3Q9UQ16 869 aa4.84□□□□□ -1.63
CLK1-214ENST00000496205 IPPQ9Y573 584 aa4.84□□□□□ -1.63
CLK1-214ENST00000496205 PCDHB6Q9Y5E3 794 aa4.84□□□□□ -1.63
CLK1-214ENST00000496205 MARCH11A6NNE9 402 aa4.83□□□□□ -1.64
CLK1-214ENST00000496205 PRR5-ARHGAP8B1AHC4 643 aa4.83□□□□□ -1.64
CLK1-214ENST00000496205 HTRA2O43464 458 aaPredicted RBP4.83□□□□□ -1.64
CLK1-214ENST00000496205 AP1G1O43747 822 aa4.83□□□□□ -1.64
CLK1-214ENST00000496205 RBMXL2O75526 392 aaKnown RBP4.83□□□□□ -1.64
CLK1-214ENST00000496205 POU2F2P09086 479 aa4.83□□□□□ -1.64
CLK1-214ENST00000496205 ATAT1Q5SQI0 421 aa4.83□□□□□ -1.64
CLK1-214ENST00000496205 METRNLQ641Q3 311 aa4.83□□□□□ -1.64
CLK1-214ENST00000496205 MICALCLQ6ZW33 695 aa4.83□□□□□ -1.64
CLK1-214ENST00000496205 TAS1R1Q7RTX1 841 aa4.83□□□□□ -1.64
CLK1-214ENST00000496205 SRRM1Q8IYB3 904 aaKnown RBP4.83□□□□□ -1.64
CLK1-214ENST00000496205 OR10H5Q8NGA6 315 aa4.83□□□□□ -1.64
CLK1-214ENST00000496205 OR14C36Q8NHC7 312 aa4.83□□□□□ -1.64
CLK1-214ENST00000496205 SLC35G2Q8TBE7 412 aa4.83□□□□□ -1.64
CLK1-214ENST00000496205 NRG4Q8WWG1 115 aa4.83□□□□□ -1.64
CLK1-214ENST00000496205 ANKS1AQ92625 1134 aa4.83□□□□□ -1.64
CLK1-214ENST00000496205 DPF2Q92785 391 aa4.83□□□□□ -1.64
CLK1-214ENST00000496205 HPS3Q969F9 1004 aa4.83□□□□□ -1.64
CLK1-214ENST00000496205 CHMP4AQ9BY43 222 aa4.83□□□□□ -1.64
CLK1-214ENST00000496205 ACE2Q9BYF1 805 aaPredicted RBP4.83□□□□□ -1.64
CLK1-214ENST00000496205 TLK1Q9UKI8 766 aa4.83□□□□□ -1.64
CLK1-214ENST00000496205 ZMYM3Q14202 1370 aa4.82□□□□□ -1.64
CLK1-214ENST00000496205 DNAJC9-AS1A6NH13 148 aa4.82□□□□□ -1.64
CLK1-214ENST00000496205 CCDC154A6NI56 674 aa4.82□□□□□ -1.64
CLK1-214ENST00000496205 DIRC3C9JPN6 131 aa4.82□□□□□ -1.64
CLK1-214ENST00000496205 MAFGO15525 162 aa4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms